Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_J01
(899 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1041 - 33713561-33714564,33714844-33714904,33715640-337159... 38 0.008
03_05_0536 - 25357355-25357411,25357463-25357588,25357764-253578... 32 0.71
02_05_0300 + 27681204-27681656,27681745-27681840,27681933-276820... 32 0.71
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 31 1.6
05_05_0016 - 21542300-21542886,21542956-21543286,21543310-215434... 30 2.2
12_01_0506 + 4017568-4017716,4018171-4018474 30 2.9
11_02_0038 - 7631462-7634428,7635975-7636250 30 2.9
02_02_0157 - 7280335-7280541,7280656-7280762,7280918-7281097,728... 30 2.9
03_05_0799 + 27809301-27811550 29 3.8
12_02_1035 - 25570009-25571241,25571940-25573709,25573797-255751... 29 5.0
09_02_0308 + 7137099-7137132,7137495-7137611,7138252-7138319,713... 29 5.0
05_05_0348 + 24271764-24271898,24273055-24273144,24273205-242733... 29 5.0
04_03_0363 - 14942195-14942203,14942421-14943417,14944178-14944278 29 5.0
06_03_0655 + 23176075-23176470,23176573-23176710,23177506-231775... 29 6.7
04_04_0664 - 27066253-27067155,27067242-27067508,27067707-270683... 29 6.7
04_03_0377 - 15121777-15122406 29 6.7
12_02_1286 - 27555143-27555191,27555290-27555511,27555911-275561... 28 8.8
12_01_0978 + 9908001-9908175,9908538-9908619,9910793-9910904,991... 28 8.8
03_06_0146 - 31976538-31978643,31978653-31978751 28 8.8
03_03_0259 + 15937549-15938307,15938393-15938767 28 8.8
03_02_0599 - 9730204-9730314,9730766-9731549,9731631-9732051,973... 28 8.8
>02_05_1041 -
33713561-33714564,33714844-33714904,33715640-33715951,
33716780-33716917
Length = 504
Score = 38.3 bits (85), Expect = 0.008
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 709 QILFTHPTHAEMLPCPFYLDGDCKFSDEQCRYSHGNVVQLSDLKE 843
+I F PT M C F+L C+F CR SHG V+ + LK+
Sbjct: 138 RISFLTPTSENMSMCKFFLQQRCRFG-SNCRLSHGIVIPILSLKQ 181
>03_05_0536 -
25357355-25357411,25357463-25357588,25357764-25357892,
25358015-25358164,25358253-25358373,25360946-25361247
Length = 294
Score = 31.9 bits (69), Expect = 0.71
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 577 RGHPLC-HCCHYFLLNHFCFCYHHCMHLSHSF 485
RG P C + CHY ++ FC H +++ H +
Sbjct: 252 RGFPACQYICHYVYVDQILFCMHITIYILHMY 283
>02_05_0300 +
27681204-27681656,27681745-27681840,27681933-27682022,
27682126-27682227,27682310-27682456,27683608-27683748,
27683749-27683808,27685133-27685230,27685308-27685410,
27685954-27686037
Length = 457
Score = 31.9 bits (69), Expect = 0.71
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 748 PCPFYLDGDCKFSDEQCRYSH 810
PC ++L GDC + E+CRY H
Sbjct: 113 PCRYFLAGDCSYG-EKCRYPH 132
>04_04_1144 + 31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = +1
Query: 229 YRQKMEDLESSLNQYKEQIKIVQQSLEATHDLKEKESLLTLQSDLNQLIELTRESL 396
++ K ++ + +EQ+ + + +E H EKE+L+ S LN+ +EL + L
Sbjct: 1408 HKIKFDEAVHKIKSLEEQLAVTENKVELFHT--EKENLVIANSKLNEELELHQNKL 1461
>05_05_0016 -
21542300-21542886,21542956-21543286,21543310-21543419,
21543526-21544069,21544190-21544345
Length = 575
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 484 EMNDSNAYNDDSKNKNDSEENNGNSDIEDDLSS 582
E N N ND ++ ++EEN GN ED SS
Sbjct: 307 EENSDNEGNDGNEELGENEENEGNETGEDSSSS 339
>12_01_0506 + 4017568-4017716,4018171-4018474
Length = 150
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 493 DSNAYNDDSKNKNDSEENNGNSDIEDDLSSLLGMRC 600
D++ Y D + K DSEE N D+E D+ G C
Sbjct: 96 DNSNYEADMELKVDSEEEYVNMDVEVDVGEATGSGC 131
>11_02_0038 - 7631462-7634428,7635975-7636250
Length = 1080
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/63 (28%), Positives = 34/63 (53%)
Frame = +2
Query: 521 KTKMIQKKIMATVT*RMTSLVYWV*GVLFIIHTNGVXSLVYTMLWSARYXLGQMMTNSMI 700
KTK +K++ + M+ L + G L++ + + +L L+ A Y GQMM ++ +
Sbjct: 461 KTKNTWEKVIESSAWSMSKLPAELRGALYLSYDDLPHNLKQCFLYCALYVEGQMMHHADL 520
Query: 701 LRF 709
+RF
Sbjct: 521 VRF 523
>02_02_0157 -
7280335-7280541,7280656-7280762,7280918-7281097,
7281182-7281277,7281378-7281459,7281553-7283037,
7283376-7283450,7283521-7283598,7283708-7283791,
7283885-7283965,7284073-7284291,7284398-7284648,
7284748-7284796
Length = 997
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/62 (19%), Positives = 33/62 (53%)
Frame = +1
Query: 241 MEDLESSLNQYKEQIKIVQQSLEATHDLKEKESLLTLQSDLNQLIELTRESLATATSKHL 420
+ED+E + + +++++++ + L+EKE ++ L + ++ L +E K +
Sbjct: 293 VEDMERLMKYQDDVVRLMKENEDLVRLLREKEDMVRLLKEKEDMVRLLKEKEGMINLKTV 352
Query: 421 KS 426
K+
Sbjct: 353 KA 354
>03_05_0799 + 27809301-27811550
Length = 749
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 733 HAEMLPCPFYLDGDCKFSDEQCRYSHG 813
H +PCP + G C+ D C Y+HG
Sbjct: 306 HYSCVPCPDFRKGVCRRGD-MCEYAHG 331
>12_02_1035 -
25570009-25571241,25571940-25573709,25573797-25575118,
25575208-25575555,25576540-25576633
Length = 1588
Score = 29.1 bits (62), Expect = 5.0
Identities = 22/113 (19%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Frame = +1
Query: 217 KSNRYRQKMEDLESSLNQYKEQIKIVQQSLEATHDLKEKESLLTLQSDLNQLIELTRESL 396
++ ++K+ + + ++ + ++ ++++L A + +++ + Q ++L L E L
Sbjct: 165 ENQELKKKISSVLENSDRAESEVASLKEAL-AQQEAEKEAAFSQCQQSSDRLQALKSEIL 223
Query: 397 ATATS-KHLKSXXXXXXXXXXXXXYARFMAEMNDSNAYNDDSKNKNDSEENNG 552
T K LK + E + N Y++ K KNDS+E +G
Sbjct: 224 QTQEEFKRLKEEMQNGLENLSTAEERCLLLERANQNLYSELDKLKNDSKERHG 276
>09_02_0308 +
7137099-7137132,7137495-7137611,7138252-7138319,
7138413-7138538,7138650-7139619,7139641-7139737,
7140026-7140113,7140336-7140396,7140425-7140447,
7140663-7140776,7141193-7141306,7144731-7144825,
7146506-7146824,7147166-7147309,7147463-7147564,
7147868-7147971,7148121-7148247,7148804-7148845,
7148939-7149091,7149326-7149426,7149807-7150227
Length = 1139
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +1
Query: 550 GNSDIEDDLSSLLGMRCAVYHTHKWGGQPSLHNAMVSSILXRADDDQFNDL 702
G ++ +D+ S+ L R + HT W HN+ ++ L R D Q +DL
Sbjct: 215 GVNNYDDEDSASLSNRIEM-HTPSWQNSSRFHNSSAATDLHRIDIRQVSDL 264
>05_05_0348 +
24271764-24271898,24273055-24273144,24273205-24273303,
24273725-24273826,24273912-24274088,24274193-24274398,
24274491-24274575,24274641-24274798,24274873-24274948,
24275117-24275245,24275313-24275457,24275561-24275691,
24276183-24276335,24276447-24276636,24277006-24277139,
24277248-24277406,24277659-24277964,24278040-24278216,
24278446-24278529,24278592-24278822,24278913-24279002,
24279090-24279211,24279293-24279448,24279477-24279635,
24279705-24279765,24280004-24280138,24280384-24280471,
24280548-24280620,24280883-24280994,24281691-24281711
Length = 1327
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/56 (26%), Positives = 32/56 (57%)
Frame = +1
Query: 223 NRYRQKMEDLESSLNQYKEQIKIVQQSLEATHDLKEKESLLTLQSDLNQLIELTRE 390
N++ ++ EDLE+++ K+Q K ++ D+K +E L L+ + +L + T +
Sbjct: 369 NKHAKRQEDLENNMKSCKDQFKEFERK-----DVKYREDLKHLKQKIKKLEDKTEK 419
>04_03_0363 - 14942195-14942203,14942421-14943417,14944178-14944278
Length = 368
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 469 ARFMAEMNDSNAYNDDSKNKNDSEENNGNSDIED-DLSSLLGMRCA 603
A+ A +++SN + S++K + E N DI+D D+++ G + A
Sbjct: 316 AQNQASIDESNTVENTSEDKAEKETTNEQEDIQDPDIANTKGKKSA 361
>06_03_0655 +
23176075-23176470,23176573-23176710,23177506-23177574,
23177652-23177723,23177973-23178055,23178135-23178266,
23178407-23178617,23179233-23179262
Length = 376
Score = 28.7 bits (61), Expect = 6.7
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 649 AMVSSILXRADDDQFNDLKVQILFTHPTHAEMLPCP 756
AM + + +A DD+ +D+ +QI+ + LP P
Sbjct: 266 AMTTPVFTQASDDKLSDVSIQIVLPMNKDLDSLPAP 301
>04_04_0664 -
27066253-27067155,27067242-27067508,27067707-27068368,
27068479-27069047,27070011-27070108
Length = 832
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 484 EMNDSNAYNDDSKNKNDSEENNGNSDIEDDLSS 582
E N N ND ++ ++EEN GN E LSS
Sbjct: 306 EENTDNDGNDGNEEHVENEENEGNKSGEGSLSS 338
>04_03_0377 - 15121777-15122406
Length = 209
Score = 28.7 bits (61), Expect = 6.7
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +1
Query: 226 RYRQKMEDLESSLNQYKEQIKIVQQSLEATHDLKEKESLLTLQSDLN 366
RY+ K+ DLE LN+ +++K +Q + HD E E+ L L +N
Sbjct: 75 RYK-KLTDLEGILNEQVDKLK--EQLHKVEHDADESETKLLLIEAIN 118
>12_02_1286 -
27555143-27555191,27555290-27555511,27555911-27556162,
27556683-27557062,27557202-27557311,27557864-27558033,
27558236-27558444,27558528-27558617,27559125-27559264,
27559356-27559463,27559626-27559716,27560736-27560852,
27561497-27561767,27561892-27562193,27562400-27562469,
27563464-27563702,27564613-27564846,27564943-27565179,
27565276-27565734
Length = 1249
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Frame = +1
Query: 217 KSNRYRQKMEDLESSLNQYKEQI---KIVQQSLEATHDLKEKESLLTLQSDLNQLIE 378
+ N R+K+ LES + +E+I + V++ LE KE+E + L+ +N++++
Sbjct: 755 EENNLREKLRRLESEKSNIEEEIDRLEPVKEELETRIGKKERE-VRVLEKKINEIVD 810
>12_01_0978 +
9908001-9908175,9908538-9908619,9910793-9910904,
9911965-9913737
Length = 713
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +1
Query: 235 QKMEDLESSLNQYKEQIKIVQQSLEATHD-LKEKES-LLTLQSDLNQLIELTRESLATAT 408
QK+ + ESSL E +K ++++ HD LK+K++ ++ DL+ ++ + L A
Sbjct: 385 QKVAEEESSLRSLVESLKQELEAVKEEHDQLKQKDTETESIVGDLHVKLQKCKSELEAAV 444
Query: 409 SKHLKS 426
+ K+
Sbjct: 445 AAESKA 450
>03_06_0146 - 31976538-31978643,31978653-31978751
Length = 734
Score = 28.3 bits (60), Expect = 8.8
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 484 EMNDSNAYNDDSKNKNDSEENNGNSDIEDD 573
E D ++DD + + E++ G+SD+E D
Sbjct: 174 ENPDDEIFDDDEEESDPEEDDTGSSDLETD 203
>03_03_0259 + 15937549-15938307,15938393-15938767
Length = 377
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +1
Query: 700 LKVQILFTHPTHAEMLPCPFYLDGDCKFSDEQCRYSHGNVVQLSDLKEAI 849
L +++ F + H E P +D +F ++ RY+HG V L + +
Sbjct: 201 LNIRLDFGYDLHEEHTHNPLSIDYLSQFYEDGVRYTHGKVAGLRTIPSVV 250
>03_02_0599 -
9730204-9730314,9730766-9731549,9731631-9732051,
9732139-9732385,9733730-9733921,9734071-9734204,
9734316-9734477,9736162-9736200,9737507-9737825
Length = 802
Score = 28.3 bits (60), Expect = 8.8
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +1
Query: 505 YNDDSKNKNDSEENNGNSDIEDDLS 579
Y ++S + ND+E+++ N + +DDLS
Sbjct: 242 YENNSGSNNDNEDDDDNDEDDDDLS 266
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,127,135
Number of Sequences: 37544
Number of extensions: 355316
Number of successful extensions: 1119
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1102
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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