Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_I24
(1101 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 38 0.017
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 38 0.017
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 38 0.017
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 33 0.48
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 33 0.48
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 32 0.83
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.83
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.83
U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical pr... 32 0.83
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 32 0.83
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 31 1.5
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 31 1.5
U97002-11|AAY86259.1| 121|Caenorhabditis elegans Hypothetical p... 30 2.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.5
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 30 2.5
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 30 2.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.5
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 30 3.4
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 30 3.4
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 30 3.4
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 30 3.4
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 30 3.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.5
AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 29 4.5
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 29 4.5
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 7.8
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 29 7.8
U14634-2|AAA21560.2| 423|Caenorhabditis elegans Hypothetical pr... 29 7.8
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 29 7.8
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 37.5 bits (83), Expect = 0.017
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +3
Query: 828 PXPXXPPPPPXPXQXPPQXQXGXXAXPPRPXAXXXRGSXPP 950
P P PPPP PP + G PP P GS PP
Sbjct: 274 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
Score = 32.7 bits (71), Expect = 0.48
Identities = 18/42 (42%), Positives = 20/42 (47%)
Frame = +3
Query: 825 SPXPXXPPPPPXPXQXPPQXQXGXXAXPPRPXAXXXRGSXPP 950
+P PPPPP P PP G + PP P A GS PP
Sbjct: 231 APPAGSPPPPPPPKGSPP--LAGSGSPPPPPAA----GSPPP 266
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Frame = +3
Query: 828 PXPXXPPPPPXPXQXPPQXQXGXXAXPPR----PXAXXXRGSXP 947
P P PPP P PP G PPR P RGS P
Sbjct: 265 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 308
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 37.5 bits (83), Expect = 0.017
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +3
Query: 828 PXPXXPPPPPXPXQXPPQXQXGXXAXPPRPXAXXXRGSXPP 950
P P PPPP PP + G PP P GS PP
Sbjct: 295 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
Score = 32.7 bits (71), Expect = 0.48
Identities = 18/42 (42%), Positives = 20/42 (47%)
Frame = +3
Query: 825 SPXPXXPPPPPXPXQXPPQXQXGXXAXPPRPXAXXXRGSXPP 950
+P PPPPP P PP G + PP P A GS PP
Sbjct: 252 APPAGSPPPPPPPKGSPP--LAGSGSPPPPPAA----GSPPP 287
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Frame = +3
Query: 828 PXPXXPPPPPXPXQXPPQXQXGXXAXPPR----PXAXXXRGSXP 947
P P PPP P PP G PPR P RGS P
Sbjct: 286 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 329
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 37.5 bits (83), Expect = 0.017
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +3
Query: 828 PXPXXPPPPPXPXQXPPQXQXGXXAXPPRPXAXXXRGSXPP 950
P P PPPP PP + G PP P GS PP
Sbjct: 280 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
Score = 32.7 bits (71), Expect = 0.48
Identities = 18/42 (42%), Positives = 20/42 (47%)
Frame = +3
Query: 825 SPXPXXPPPPPXPXQXPPQXQXGXXAXPPRPXAXXXRGSXPP 950
+P PPPPP P PP G + PP P A GS PP
Sbjct: 237 APPAGSPPPPPPPKGSPP--LAGSGSPPPPPAA----GSPPP 272
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Frame = +3
Query: 828 PXPXXPPPPPXPXQXPPQXQXGXXAXPPR----PXAXXXRGSXP 947
P P PPP P PP G PPR P RGS P
Sbjct: 271 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 314
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical protein
F15B9.4 protein.
Length = 1140
Score = 32.7 bits (71), Expect = 0.48
Identities = 19/66 (28%), Positives = 19/66 (28%)
Frame = +3
Query: 843 PPPPPXPXQXPPQXQXGXXAXPPRPXAXXXRGSXPPXXXWXLXXXKPXXXXXXXXXXXAP 1022
PPPPP P P G PP P G PP L K P
Sbjct: 520 PPPPPMPGMAP--LSTGAPTPPPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPP 577
Query: 1023 XKAXPP 1040
PP
Sbjct: 578 PPPPPP 583
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 32.7 bits (71), Expect = 0.48
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 916 GRGGXAXXPXWXCGGXXXGXGGGGGXXGXG 827
GR G P W GG G GGGG G G
Sbjct: 38 GRSGGWGRPGWGGGGPGWGRGGGGSGWGGG 67
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.9 bits (69), Expect = 0.83
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 916 GRGGXAXXPXWXCGGXXXGXGGGGGXXGXG 827
G GG CGG G GGGGG G G
Sbjct: 73 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGG 102
Score = 31.9 bits (69), Expect = 0.83
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 916 GRGGXAXXPXWXCGGXXXGXGGGGGXXGXG 827
G GG CGG G GGGGG G G
Sbjct: 137 GGGGCGGGGGGGCGGGGGGCGGGGGGCGGG 166
Score = 31.9 bits (69), Expect = 0.83
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 916 GRGGXAXXPXWXCGGXXXGXGGGGGXXGXG 827
G GG CGG G GGGGG G G
Sbjct: 144 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGG 173
Score = 30.3 bits (65), Expect = 2.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 910 GGXAXXPXWXCGGXXXGXGGGGGXXGXG 827
GG CGG G GGGGG G G
Sbjct: 62 GGGCGGGGGGCGGGGGGCGGGGGCGGGG 89
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 916 GRGGXAXXPXWXCGGXXXGXGGGGGXXG 833
G GG CGG G GGGGG G
Sbjct: 80 GGGGGCGGGGGGCGGGGGGCGGGGGCGG 107
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = -3
Query: 916 GRGGXAXXPXWXCGGXXXGXGGGGGXXGXGDXKXXXXRSSXDLXG 782
G GG CGG G GGGG G G R + ++ G
Sbjct: 158 GGGGGCGGGGGGCGGGGGGGCGGGGGGGCGGGCGRKKREAINVVG 202
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.83
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 916 GRGGXAXXPXWXCGGXXXGXGGGGGXXGXG 827
G GG CGG G GGGGG G G
Sbjct: 91 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGG 120
Score = 31.9 bits (69), Expect = 0.83
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 916 GRGGXAXXPXWXCGGXXXGXGGGGGXXGXG 827
G GG CGG G GGGGG G G
Sbjct: 98 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGG 127
Score = 31.9 bits (69), Expect = 0.83
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 916 GRGGXAXXPXWXCGGXXXGXGGGGGXXGXG 827
G GG CGG G GGGGG G G
Sbjct: 105 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGG 134
Score = 31.5 bits (68), Expect = 1.1
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 916 GRGGXAXXPXWXCGGXXXGXGGGGGXXGXG 827
G GG P CGG G GGG G G G
Sbjct: 67 GGGGGCAPPPAPCGGGCGGGGGGCGGGGGG 96
Score = 30.3 bits (65), Expect = 2.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 910 GGXAXXPXWXCGGXXXGXGGGGGXXGXG 827
GG CGG G GGGGG G G
Sbjct: 80 GGGCGGGGGGCGGGGGGCGGGGGCGGGG 107
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 916 GRGGXAXXPXWXCGGXXXGXGGGGGXXG 833
G GG P CGG G GGG G G
Sbjct: 43 GGGGGCAPPPAPCGGGCGGGGGGCGGGG 70
Score = 29.1 bits (62), Expect = 5.9
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -3
Query: 937 PLXXXAXGRGGXAXXPXWXCGGXXXGXGGGGGXXGXG 827
P G GG CGG GGGGG G G
Sbjct: 78 PCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGG 114
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 916 GRGGXAXXPXWXCGGXXXGXGGGGGXXGXG 827
G GG CGG G GGGG G G
Sbjct: 135 GGGGCGGGSSGGCGGGSSGGCGGGGGGGCG 164
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.83
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 916 GRGGXAXXPXWXCGGXXXGXGGGGGXXGXG 827
G GG CGG G GGGGG G G
Sbjct: 91 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGG 120
Score = 31.9 bits (69), Expect = 0.83
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 916 GRGGXAXXPXWXCGGXXXGXGGGGGXXGXG 827
G GG CGG G GGGGG G G
Sbjct: 98 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGG 127
Score = 31.9 bits (69), Expect = 0.83
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 916 GRGGXAXXPXWXCGGXXXGXGGGGGXXGXG 827
G GG CGG G GGGGG G G
Sbjct: 105 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGG 134
Score = 31.5 bits (68), Expect = 1.1
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 916 GRGGXAXXPXWXCGGXXXGXGGGGGXXGXG 827
G GG P CGG G GGG G G G
Sbjct: 67 GGGGGCAPPPAPCGGGCGGGGGGCGGGGGG 96
Score = 30.3 bits (65), Expect = 2.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 910 GGXAXXPXWXCGGXXXGXGGGGGXXGXG 827
GG CGG G GGGGG G G
Sbjct: 80 GGGCGGGGGGCGGGGGGCGGGGGCGGGG 107
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 916 GRGGXAXXPXWXCGGXXXGXGGGGGXXG 833
G GG P CGG G GGG G G
Sbjct: 43 GGGGGCAPPPAPCGGGCGGGGGGCGGGG 70
Score = 29.1 bits (62), Expect = 5.9
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -3
Query: 937 PLXXXAXGRGGXAXXPXWXCGGXXXGXGGGGGXXGXG 827
P G GG CGG GGGGG G G
Sbjct: 78 PCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGG 114
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 916 GRGGXAXXPXWXCGGXXXGXGGGGGXXGXG 827
G GG CGG G GGGG G G
Sbjct: 135 GGGGCGGGSSGGCGGGSSGGCGGGGGGGCG 164
>U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical
protein ZK354.8 protein.
Length = 483
Score = 31.9 bits (69), Expect = 0.83
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +3
Query: 828 PXPXXPPPPPXP-XQXPPQXQXGXXAXPPRP 917
P P PPPPP P P Q A PP+P
Sbjct: 92 PPPSDPPPPPPPVAPHQPPPQLATSAQPPQP 122
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.9 bits (69), Expect = 0.83
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +3
Query: 825 SPXPXXPPPPPXPXQXPPQXQXGXXAXPPRPXAXXXRGSXP 947
+P P PPPPP P Q PP P A + + P
Sbjct: 23 TPQPPPPPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVP 63
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = +3
Query: 825 SPXPXXPPPPPXPXQXPPQXQXGXXAXPPRPXAXXXRGSXP 947
+P PPPPP P PP PP P + S P
Sbjct: 126 APYQQQPPPPPPPPHYPPPPPH-YPPPPPAPHSAYIDHSAP 165
Score = 25.4 bits (53), Expect(2) = 3.1
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 819 FXSPXPXXPPPPPXP 863
+ P P PPPPP P
Sbjct: 141 YPPPPPHYPPPPPAP 155
Score = 23.0 bits (47), Expect(2) = 3.1
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3
Query: 843 PPPPPXPXQXPPQ 881
PP P P Q PPQ
Sbjct: 176 PPQPQYPQQQPPQ 188
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 31.1 bits (67), Expect = 1.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 819 FXSPXPXXPPPPPXPXQXPP 878
F P P PPPPP P PP
Sbjct: 64 FCPPPPICPPPPPPPMPCPP 83
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +3
Query: 828 PXPXXPPPPPXPXQ-XPPQXQXGXXAXPPRP 917
P P PPPPP P Q PP PP P
Sbjct: 50 PMPVCPPPPPCPAQFCPPPPICPPPPPPPMP 80
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 31.1 bits (67), Expect = 1.5
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 916 GRGGXAXXPXWXCGGXXXGXGGGGGXXGXG 827
GRGG P GG G GGGG G G
Sbjct: 140 GRGGDGRGPPGSNGGGDWGGNGGGGRGGGG 169
>U97002-11|AAY86259.1| 121|Caenorhabditis elegans Hypothetical
protein K09H11.11 protein.
Length = 121
Score = 30.3 bits (65), Expect = 2.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 828 PXPXXPPPPPXPXQXPPQXQ 887
P P PPPP P Q PP Q
Sbjct: 7 PPPGQQPPPPPPGQQPPHPQ 26
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +3
Query: 828 PXPXXPPPPPXPXQXPPQXQXGXXAXPPRPXAXXXRGSXPP 950
P PPPPP P PP G PP G PP
Sbjct: 721 PITGGPPPPPPPGGLPP-ITGGPPPPPPPGGLPPISGGPPP 760
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 828 PXPXXPPPPPXPXQXPPQXQXGXXAXPPRP 917
P P PPP P PP G PP P
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 28.7 bits (61), Expect = 7.8
Identities = 16/50 (32%), Positives = 17/50 (34%), Gaps = 9/50 (18%)
Frame = +3
Query: 828 PXPXXPPPPPXPX---------QXPPQXQXGXXAXPPRPXAXXXRGSXPP 950
P PPPPP P PP G PP P +G PP
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +3
Query: 828 PXPXXPPPPPXPXQXPPQXQXGXXAXPPRPXAXXXRGSXPP 950
P PPPPP P PP G PP G PP
Sbjct: 721 PITGGPPPPPPPGGLPP-ITGGPPPPPPPGGLPPISGGPPP 760
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 828 PXPXXPPPPPXPXQXPPQXQXGXXAXPPRP 917
P P PPP P PP G PP P
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 28.7 bits (61), Expect = 7.8
Identities = 16/50 (32%), Positives = 17/50 (34%), Gaps = 9/50 (18%)
Frame = +3
Query: 828 PXPXXPPPPPXPX---------QXPPQXQXGXXAXPPRPXAXXXRGSXPP 950
P PPPPP P PP G PP P +G PP
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 834 PXXPPPPPXPXQXPPQXQXGXXAXPPRPXA 923
P PPPPP P PP + PPRP A
Sbjct: 89 PTPPPPPPKPTIRPPPI---PASPPPRPPA 115
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 834 PXXPPPPPXPXQXPPQXQXGXXAXPPRPXA 923
P PPPPP P PP + PPRP A
Sbjct: 311 PTPPPPPPKPTIRPPPI---PASPPPRPPA 337
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +3
Query: 828 PXPXXPPPPPXPXQXPPQXQXGXXAXPPRPXAXXXRGSXPP 950
P PPPPP P PP G PP G PP
Sbjct: 304 PITGGPPPPPPPGGLPP-ITGGPPPPPPPGGLPPISGGPPP 343
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 828 PXPXXPPPPPXPXQXPPQXQXGXXAXPPRP 917
P P PPP P PP G PP P
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 28.7 bits (61), Expect = 7.8
Identities = 16/50 (32%), Positives = 17/50 (34%), Gaps = 9/50 (18%)
Frame = +3
Query: 828 PXPXXPPPPPXPX---------QXPPQXQXGXXAXPPRPXAXXXRGSXPP 950
P PPPPP P PP G PP P +G PP
Sbjct: 320 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 825 SPXPXXPPPPPXPXQXPPQ 881
SP PPPPP P PPQ
Sbjct: 353 SPPAPPPPPPPPPPPPPPQ 371
Score = 29.1 bits (62), Expect = 5.9
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 828 PXPXXPPPPPXPXQXP 875
P P PPPPP P Q P
Sbjct: 358 PPPPPPPPPPPPPQTP 373
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 843 PPPPPXPXQXPPQXQXGXXAXPP 911
PPPPP PP+ Q G PP
Sbjct: 772 PPPPPSAIPLPPRLQGGIPPPPP 794
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 843 PPPPPXPXQXPPQXQXGXXAXPPRPXA 923
PPPPP P PP A PP A
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPPPSSNA 28
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 843 PPPPPXPXQXPPQXQXGXXAXPPRPXA 923
PPPPP P PP A PP A
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPPPSSNA 28
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 843 PPPPPXPXQXPPQXQXGXXAXPP 911
PPPPP PP+ Q G PP
Sbjct: 772 PPPPPSAIPLPPRLQGGIPPPPP 794
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 834 PXXPPPPPXPXQXPPQXQXGXXAXPPRPXAXXXRGSXPP 950
P PPPPP PP G PP P G PP
Sbjct: 314 PGMPPPPPPSRFGPPGM--GGMPPPPPPGMRYPGGMPPP 350
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 834 PXXPPPPPXPXQXPPQXQXGXXAXPPRPXAXXXRGSXPP 950
P PPPPP PP PP G PP
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPP 335
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 834 PXXPPPPPXPXQXPPQXQXGXXAXPPRPXAXXXRGSXPP 950
P PPPPP PP G PP P G PP
Sbjct: 324 PGMPPPPPPSRFGPPGM--GGMPPPPPPGMRYPGGMPPP 360
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 834 PXXPPPPPXPXQXPPQXQXGXXAXPPRPXAXXXRGSXPP 950
P PPPPP PP PP G PP
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPP 345
>AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15a protein.
Length = 933
Score = 29.5 bits (63), Expect = 4.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 834 PXXPPPPPXPXQXPPQ 881
P PPPPP P PPQ
Sbjct: 789 PIPPPPPPPPPMLPPQ 804
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 29.5 bits (63), Expect = 4.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 834 PXXPPPPPXPXQXPPQ 881
P PPPPP P PPQ
Sbjct: 688 PIPPPPPPPPPMLPPQ 703
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 29.1 bits (62), Expect = 5.9
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 880 CGGXXXGXGGGGGXXGXG 827
CGG G GGGGG G G
Sbjct: 95 CGGGGGGCGGGGGCGGGG 112
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Frame = +3
Query: 819 FXSPXPXXPPPPP-XPXQXPPQXQXGXXAXPPRPXAXXXRGSXPP 950
+ P P PPPPP P P PP P A PP
Sbjct: 83 YVPPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPP 127
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 828 PXPXXPPPPPXPXQXPPQXQ 887
P P PPPPP P PPQ Q
Sbjct: 135 PPPPSPPPPPPP--PPPQLQ 152
>U14634-2|AAA21560.2| 423|Caenorhabditis elegans Hypothetical
protein T15B12.2 protein.
Length = 423
Score = 28.7 bits (61), Expect = 7.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 843 PPPPPXPXQXPPQXQ 887
PPPPP P Q PP Q
Sbjct: 402 PPPPPPPPQKPPTKQ 416
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +3
Query: 825 SPXPXXPPPPPXPXQXPPQXQXGXXAXPPRPXAXXXRGSXPP 950
+P P P PP P P Q G P P A G PP
Sbjct: 171 APGPQGPSGPPGPPGQP--GQPGQRGPPGEPGALLPGGDAPP 210
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,227,441
Number of Sequences: 27780
Number of extensions: 127054
Number of successful extensions: 2199
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1714
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2971275592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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