Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_I20
(1161 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 49 1e-06
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 39 0.001
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 36 0.008
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 33 0.076
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 27 0.29
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.93
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 1.6
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 2.2
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 28 2.7
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 6.6
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 6.6
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 8.7
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 48.8 bits (111), Expect = 1e-06
Identities = 24/56 (42%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Frame = +1
Query: 844 PPPPXFFFFFXXP-----PPXXXGGGGXXPPPPPXXXXXXXXPPPPPPPPXXXGGG 996
PPPP P PP GG PPPPP PPPPPPPP GG
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 42.3 bits (95), Expect = 1e-04
Identities = 30/85 (35%), Positives = 30/85 (35%)
Frame = +1
Query: 739 KXPPPPPPXXXGGGGXXKKXXPXPXFXXFXXXXXXPPPPXFFFFFXXPPPXXXGGGGXXP 918
K PPPPPP P P P P PPP GG P
Sbjct: 730 KSPPPPPPAV---------IVPTP----------APAP------IPVPPPAPIMGGPPPP 764
Query: 919 PPPPXXXXXXXXPPPPPPPPXXXGG 993
PPPP PPPPPPP GG
Sbjct: 765 PPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 28.7 bits (61), Expect = 1.6
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Frame = +1
Query: 916 PPPPPXXXXXXXXPPP-PPPPPXXXGGG 996
PPPPP P P P PPP GG
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGG 760
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 843 PPPPXFFFFFXXPPPPXXGGGGXXTPPPP 929
PPP PPPP G PPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 28.3 bits (60), Expect = 2.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 746 PPPPPPXXXGGGGXXKKXPP 805
PPPPPP G G PP
Sbjct: 762 PPPPPPPGVAGAGPPPPPPP 781
Score = 27.5 bits (58), Expect = 3.8
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 843 PPPPXFFFFFXXPPPPXXGGGGXXTPPPP 929
P PP PPPP G PPPP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 26.6 bits (56), Expect = 6.6
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 718 GXXGXXKKXPPPPPPXXXGGG 780
G G PPPPPP GG
Sbjct: 769 GVAGAGPPPPPPPPPAVSAGG 789
Score = 23.4 bits (48), Expect(2) = 4.5
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = -3
Query: 784 PPPPPXXXGGGGGXXFFXXP 725
PPPPP GG + P
Sbjct: 778 PPPPPPAVSAGGSRYYAPAP 797
Score = 21.8 bits (44), Expect(2) = 4.5
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = -3
Query: 925 GGGVXXPPPPXXGGGG 878
GG PPPP G G
Sbjct: 759 GGPPPPPPPPGVAGAG 774
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 39.1 bits (87), Expect = 0.001
Identities = 27/89 (30%), Positives = 27/89 (30%), Gaps = 8/89 (8%)
Frame = +1
Query: 736 KKXPPPPPPXXX--------GGGGXXKKXXPXPXFXXFXXXXXXPPPPXFFFFFXXPPPX 891
KK PPPPPP G G P P P PP PPP
Sbjct: 308 KKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPR 367
Query: 892 XXGGGGXXPPPPPXXXXXXXXPPPPPPPP 978
G PPP P PPP P
Sbjct: 368 SAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Score = 32.3 bits (70), Expect = 0.13
Identities = 24/84 (28%), Positives = 25/84 (29%), Gaps = 6/84 (7%)
Frame = +1
Query: 745 PPPPPPXXXGGGGXX-----KKXXPXPXFXXFXXXXXXPPPPXFFFFFXXPP-PXXXGGG 906
PPPPPP G + P P PPP PP P G
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPG 397
Query: 907 GXXPPPPPXXXXXXXXPPPPPPPP 978
P PP PP P PP
Sbjct: 398 RSAPALPPLGNASRTSTPPVPTPP 421
Score = 30.7 bits (66), Expect = 0.40
Identities = 23/84 (27%), Positives = 23/84 (27%)
Frame = +1
Query: 718 GXXGXXKKXPPPPPPXXXGGGGXXKKXXPXPXFXXFXXXXXXPPPPXFFFFFXXPPPXXX 897
G PPPPPP G P P PPP PPP
Sbjct: 328 GNGSSNSSLPPPPPPPRSNAAGSI----PLPPQGR--SAPPPPPPRSAPSTGRQPPPLSS 381
Query: 898 GGGGXXPPPPPXXXXXXXXPPPPP 969
PP PP P PP
Sbjct: 382 SRAVSNPPAPPPAIPGRSAPALPP 405
Score = 29.1 bits (62), Expect = 1.2
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 880 PPPXXXGGGGXXPPPPPXXXXXXXXPPPPPPPPXXXGG 993
PPP PP PPPPPPP G
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAG 349
Score = 27.9 bits (59), Expect = 2.8
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 880 PPPXXXGGGGXXPPPPPXXXXXXXXPPPPPPPPXXXGGG 996
PPP PP PPPPPPP G
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAG 349
Score = 26.6 bits (56), Expect = 6.6
Identities = 19/71 (26%), Positives = 19/71 (26%), Gaps = 7/71 (9%)
Frame = +2
Query: 734 KKXXPPPPPP-------XXXGGGGXXKKXPPXXXFXFXXXXXXXXXXXXXXXXXXXPPPX 892
KK PPPPPP G G PP PPP
Sbjct: 308 KKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPR 367
Query: 893 XXGGGGXXPPP 925
G PPP
Sbjct: 368 SAPSTGRQPPP 378
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 36.3 bits (80), Expect = 0.008
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +1
Query: 904 GGXXPPPPPXXXXXXXXPPPPPPP 975
G PPPPP PPPPPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 35.9 bits (79), Expect = 0.011
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +1
Query: 907 GXXPPPPPXXXXXXXXPPPPPPPP 978
G PPPPP PPPPPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 32.7 bits (71), Expect = 0.100
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 901 GGGXXPPPPPXXXXXXXXPPPPPP 972
G PPPPP PPPPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPP 30
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 33.1 bits (72), Expect = 0.076
Identities = 22/73 (30%), Positives = 23/73 (31%)
Frame = +1
Query: 751 PPPPXXXGGGGXXKKXXPXPXFXXFXXXXXXPPPPXFFFFFXXPPPXXXGGGGXXPPPPP 930
PPPP G + P P PPP PPP G PPPP
Sbjct: 273 PPPPMHHEPG----EHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Query: 931 XXXXXXXXPPPPP 969
PPPP
Sbjct: 329 MHHEPGEHMPPPP 341
Score = 31.5 bits (68), Expect = 0.23
Identities = 27/87 (31%), Positives = 28/87 (32%), Gaps = 11/87 (12%)
Frame = +1
Query: 751 PPPPXXXGGGGXXKKXXPXPXFXXFXXXXXXPPPPXFFF--FFXXPPPXXXGGGGXXPPP 924
PPPP G + P P PPPP PPP G PPP
Sbjct: 221 PPPPMHHEPG----EHMPPPPMHH-EPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 275
Query: 925 PPXXXXXXXXPPPP---------PPPP 978
P PPPP PPPP
Sbjct: 276 PMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 31.5 bits (68), Expect = 0.23
Identities = 27/87 (31%), Positives = 28/87 (32%), Gaps = 11/87 (12%)
Frame = +1
Query: 751 PPPPXXXGGGGXXKKXXPXPXFXXFXXXXXXPPPPXFFF--FFXXPPPXXXGGGGXXPPP 924
PPPP G + P P PPPP PPP G PPP
Sbjct: 247 PPPPMHHEPG----EHMPPPPMHH-EPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 301
Query: 925 PPXXXXXXXXPPPP---------PPPP 978
P PPPP PPPP
Sbjct: 302 PMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 29.5 bits (63), Expect = 0.93
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 9/42 (21%)
Frame = +1
Query: 880 PPPXXXGGGGXXPPPPPXXXXXXXXPPPP---------PPPP 978
PPP G PPPP PPPP PPPP
Sbjct: 209 PPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 28.3 bits (60), Expect = 2.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 880 PPPXXXGGGGXXPPPPPXXXXXXXXPPPPP 969
PPP G PPPP PPPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPP 237
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.6 bits (56), Expect = 6.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 955 PPPPPPPP 978
PPPPPPPP
Sbjct: 306 PPPPPPPP 313
Score = 26.6 bits (56), Expect(2) = 0.29
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 955 PPPPPPPP 978
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
Score = 23.0 bits (47), Expect(2) = 0.29
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +1
Query: 880 PPPXXXGGGGXXPPPPP 930
P GG PPPPP
Sbjct: 295 PSSGDSANGGLPPPPPP 311
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 29.5 bits (63), Expect = 0.93
Identities = 27/78 (34%), Positives = 28/78 (35%), Gaps = 2/78 (2%)
Frame = -2
Query: 971 GGGGGGXXXXXXXXGGGGGXXPPPPXXXG--GGXXKKKKKXGGGGXXXXXXKXKXXGXGX 798
GGG GG GGG G PP P G GG + GG G G G
Sbjct: 187 GGGFGGF-------GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGG 239
Query: 797 FFFXXPPPPXXXGGGGGG 744
F P GGG GG
Sbjct: 240 F----GGGPGGFGGGLGG 253
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 6.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 955 PPPPPPPP 978
PPPPPPPP
Sbjct: 189 PPPPPPPP 196
Score = 26.6 bits (56), Expect = 6.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 955 PPPPPPPP 978
PPPPPPPP
Sbjct: 190 PPPPPPPP 197
Score = 25.8 bits (54), Expect(2) = 1.6
Identities = 13/36 (36%), Positives = 13/36 (36%), Gaps = 3/36 (8%)
Frame = +1
Query: 880 PPPXXXGGGGXXPPPPPXXXXXXXXP---PPPPPPP 978
P G P PP P PPPPPPP
Sbjct: 209 PDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPP 244
Score = 21.0 bits (42), Expect(2) = 1.6
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +1
Query: 745 PPPPPP 762
PPPPPP
Sbjct: 190 PPPPPP 195
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.3 bits (60), Expect = 2.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 919 PPPPXXXXXXXXPPPPPPPP 978
PPPP PP PPPP
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPP 1734
Score = 26.6 bits (56), Expect = 6.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 916 PPPPPXXXXXXXXPPPPPPPPXXXG 990
PPPPP PPPP PP G
Sbjct: 1707 PPPPPM-----SVPPPPSAPPMPAG 1726
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.9 bits (59), Expect = 2.8
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 955 PPPPPPPPXXXGGG 996
PPPPPPPP G
Sbjct: 946 PPPPPPPPLVSAAG 959
Score = 26.6 bits (56), Expect = 6.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 955 PPPPPPPP 978
PPPPPPPP
Sbjct: 945 PPPPPPPP 952
Score = 26.2 bits (55), Expect = 8.7
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 955 PPPPPPPPXXXGGG 996
PPPPPPP GG
Sbjct: 947 PPPPPPPLVSAAGG 960
Score = 24.6 bits (51), Expect(2) = 2.7
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 745 PPPPPPXXXGGGG 783
PPPPPP GG
Sbjct: 948 PPPPPPLVSAAGG 960
Score = 21.4 bits (43), Expect(2) = 2.7
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +1
Query: 727 GXXKKXPPPPPP 762
G PPPPPP
Sbjct: 939 GVMPAFPPPPPP 950
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 6.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 955 PPPPPPPP 978
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 6.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 955 PPPPPPPP 978
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.2 bits (55), Expect = 8.7
Identities = 13/35 (37%), Positives = 13/35 (37%), Gaps = 3/35 (8%)
Frame = +1
Query: 883 PPXXXGGGGXXPPPPPXXXXXXXXPP---PPPPPP 978
PP G P PPP P PP PPP
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,556,748
Number of Sequences: 5004
Number of extensions: 44996
Number of successful extensions: 491
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 243
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 621560784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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