Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_I19
         (836 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0316 + 2565704-2566134,2566682-2566845,2566989-2567152,256...    31   0.86 
01_03_0053 + 12050631-12051620                                         30   2.6  
01_03_0052 + 12014849-12015133                                         30   2.6  
12_02_0299 - 17051570-17052474,17053542-17053755                       28   8.0  

>01_01_0316 +
           2565704-2566134,2566682-2566845,2566989-2567152,
           2567594-2567720,2568347-2568450
          Length = 329

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -3

Query: 219 LHSTXECSQFFQRHISXNXSLWXHDRSQKGVN 124
           LH   EC  F  ++ S N   W  +RSQ G N
Sbjct: 294 LHVNDECLYFDDKYFSRNAHFWKRERSQCGYN 325


>01_03_0053 + 12050631-12051620
          Length = 329

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -1

Query: 326 FXNPKFLGKFXNRWFNLGXXVPLANSIFLKGXFSGNST 213
           F NP+ L  F  RW   G   PL  +I +   F+G S+
Sbjct: 35  FVNPRGLRIFTQRWVPAGGDAPLLGAIAVVHGFTGESS 72


>01_03_0052 + 12014849-12015133
          Length = 94

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -1

Query: 326 FXNPKFLGKFXNRWFNLGXXVPLANSIFLKGXFSGNST 213
           F NP+ L  F  RW   G   PL  +I +   F+G S+
Sbjct: 35  FVNPRGLRIFTQRWVPAGVDAPLLGAIAVVHGFTGESS 72


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
 Frame = +1

Query: 391 FSPNWXPPPXXXXF---FPQXG-LXXXPPLXXFFXXTPP 495
           FSP   PPP    F   FPQ   L   PPL  F+   PP
Sbjct: 284 FSPPSPPPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPP 322


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,476,047
Number of Sequences: 37544
Number of extensions: 303017
Number of successful extensions: 287
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 284
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)