Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_I18
(911 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70783-6|CAA94856.1| 195|Caenorhabditis elegans Hypothetical pr... 30 2.0
U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF016435-6|AAB65882.1| 213|Caenorhabditis elegans Hypothetical ... 30 2.0
U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei... 30 2.6
Z80216-5|CAB02282.1| 190|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z77664-1|CAB01216.2| 900|Caenorhabditis elegans Hypothetical pr... 29 6.1
U41274-6|AAA82462.1| 601|Caenorhabditis elegans Hypothetical pr... 29 6.1
L33681-1|AAA85632.1| 190|Caenorhabditis elegans neuronal calciu... 29 6.1
AL031627-1|CAA20945.1| 550|Caenorhabditis elegans Hypothetical ... 29 6.1
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z70752-3|CAA94755.3| 654|Caenorhabditis elegans Hypothetical pr... 28 8.1
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 8.1
AF023454-1|AAB82794.1| 707|Caenorhabditis elegans protein phosp... 28 8.1
AF003389-12|AAM22065.1| 572|Caenorhabditis elegans Phosphatase ... 28 8.1
AF003389-11|AAC71139.2| 707|Caenorhabditis elegans Phosphatase ... 28 8.1
AC006830-7|AAK68613.2| 479|Caenorhabditis elegans Hypothetical ... 28 8.1
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 23 8.4
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 23 8.4
>Z70783-6|CAA94856.1| 195|Caenorhabditis elegans Hypothetical
protein ZK856.8 protein.
Length = 195
Score = 30.3 bits (65), Expect = 2.0
Identities = 28/129 (21%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Frame = +1
Query: 505 LDRSEFWRRKM-RTVHNILDVDK--DGLISYNDFLLFAERFKSLGHLDAKQAKEFTDIIK 675
+ +EF R ++ R L +DK G +S +DFL E ++ L + F +
Sbjct: 18 MSETEFNRNQIVRLYSRFLSLDKKGQGFLSRDDFLNVPEL--AVNPLGDRIVDAFFTLAS 75
Query: 676 MTWEQQWGTIDPYNFVTVEQYLEDMHHVLNDKTLKKKAHRWLPYLFKXVDADRSGYISVR 855
+ + ++ FV + + + + V + +K L + FK D +++ YI+
Sbjct: 76 SNGDNEEQQLNFRQFVRILAHFQPISRVKKNALNSRKDK--LLFAFKMYDLNKNDYITRE 133
Query: 856 EFKFVFECL 882
EFK + +
Sbjct: 134 EFKVILNSM 142
>U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical
protein B0563.7 protein.
Length = 229
Score = 30.3 bits (65), Expect = 2.0
Identities = 29/119 (24%), Positives = 54/119 (45%)
Frame = +1
Query: 529 RKMRTVHNILDVDKDGLISYNDFLLFAERFKSLGHLDAKQAKEFTDIIKMTWEQQWGTID 708
++ R + N+ D D G I + + S+G L A +A E ++IK G ID
Sbjct: 51 KEYRQLFNMFDTDGSGAIGNEEL---KQAMISIG-LHANKA-EIDNVIKEVDADGNGEID 105
Query: 709 PYNFVTVEQYLEDMHHVLNDKTLKKKAHRWLPYLFKXVDADRSGYISVREFKFVFECLG 885
F + +++ N++ +++ F+ D DR+G I+ EFK++ + G
Sbjct: 106 FEEFCACMKKSQNIVKSTNEELIRE--------CFEIFDQDRNGIITENEFKYIAKEFG 156
>AF016435-6|AAB65882.1| 213|Caenorhabditis elegans Hypothetical
protein F59D6.7 protein.
Length = 213
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/109 (22%), Positives = 48/109 (44%)
Frame = +1
Query: 556 LDVDKDGLISYNDFLLFAERFKSLGHLDAKQAKEFTDIIKMTWEQQWGTIDPYNFVTVEQ 735
LD + G +S +DFL E ++ L + F + + + G + FV +
Sbjct: 56 LDKNGQGYLSRDDFLNVPEL--AVNPLGDRIIDAFFTLGDSDGDSKSGQLTFRQFVRILA 113
Query: 736 YLEDMHHVLNDKTLKKKAHRWLPYLFKXVDADRSGYISVREFKFVFECL 882
+ + + V D L + + L + FK D +++ YI+ EFK + +
Sbjct: 114 HFQPISKV-KDNALNSRKDK-LRFAFKMYDLNKNNYITREEFKVILNSM 160
>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
protein.
Length = 2427
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/66 (24%), Positives = 30/66 (45%)
Frame = +1
Query: 688 QQWGTIDPYNFVTVEQYLEDMHHVLNDKTLKKKAHRWLPYLFKXVDADRSGYISVREFKF 867
Q W +D + ++ LE N + ++A R +FK D +++G + ++FK
Sbjct: 2246 QAWDQLDQLA-MRMQHNLEQQIQARNQSGVSEEALREFSMMFKHFDKEKTGRLDHQQFKS 2304
Query: 868 VFECLG 885
LG
Sbjct: 2305 CLRALG 2310
>Z80216-5|CAB02282.1| 190|Caenorhabditis elegans Hypothetical
protein F10G8.5 protein.
Length = 190
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +1
Query: 643 KQAKEFTDIIKMTWEQQWGTIDPYNFVTVEQYLEDMHHVLNDKTLKKKAHRWLPYLFKXV 822
K+ FT+ W + + P +T EQ+++ V D A + ++F+
Sbjct: 19 KKNTNFTEEQIKEWYKGFVQDCPKGHLTKEQFIK----VYKDFFPSGSAEGFCEHVFRTF 74
Query: 823 DADRSGYISVREF 861
D D SG+I +EF
Sbjct: 75 DTDNSGFIDFKEF 87
>Z77664-1|CAB01216.2| 900|Caenorhabditis elegans Hypothetical
protein F53H10.2 protein.
Length = 900
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 745 PPSIVPPSRNCTGLWCPIVAPMSS 674
PP I+ P RN +GL+C IV +S
Sbjct: 314 PPPILAPMRNGSGLFCQIVKSANS 337
>U41274-6|AAA82462.1| 601|Caenorhabditis elegans Hypothetical
protein T04G9.6 protein.
Length = 601
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 108 VASDGYRSDFACLKLVKKLISESINFLTAMANS 206
V SD Y SDFA + + SE+ ++LTA +S
Sbjct: 343 VVSDSYSSDFASTAIPEASESENSDYLTASVSS 375
>L33681-1|AAA85632.1| 190|Caenorhabditis elegans neuronal calcium
binding protein protein.
Length = 190
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +1
Query: 643 KQAKEFTDIIKMTWEQQWGTIDPYNFVTVEQYLEDMHHVLNDKTLKKKAHRWLPYLFKXV 822
K+ FT+ W + + P +T EQ+++ V D A + ++F+
Sbjct: 19 KKNTNFTEEQIKEWYKGFVQDCPKGHLTKEQFIK----VYKDFFPSGSAEGFCEHVFRTF 74
Query: 823 DADRSGYISVREF 861
D D SG+I +EF
Sbjct: 75 DTDNSGFIDFKEF 87
>AL031627-1|CAA20945.1| 550|Caenorhabditis elegans Hypothetical
protein Y102A5C.4 protein.
Length = 550
Score = 28.7 bits (61), Expect = 6.1
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = -3
Query: 675 LDDVGEFLRLLRVEVAKRLEPFSEQQEVVVRDQPILVHV*DIVDGTHLAAPELRPVQPLT 496
L +VGE++ +E+A + P + ++ VV I G +L P+L+P LT
Sbjct: 36 LTNVGEYV----IELADNVAPTNLTRKFVVLSNTI---------GKYLEGPKLQPRNELT 82
Query: 495 LSVRIGIRFRIGLFPSVY 442
LS R+ + + + P Y
Sbjct: 83 LSTRVELEDLVVVVPKKY 100
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 689 CSHVILMMSVNSFACFASRWPRDLNLSANSKKSLYEISPSL 567
CSH+ L+ + N+F C + P L A+ KK + + P L
Sbjct: 1756 CSHLCLLNNKNTFTC---KCPMGEKLDASGKKCIDDAKPFL 1793
>Z70752-3|CAA94755.3| 654|Caenorhabditis elegans Hypothetical
protein F25B3.3 protein.
Length = 654
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 763 NDKTLKKKAHRWLPYLFKXVDADRSGYISVREFKFV 870
++ T+ K + +FK D DR G+IS EF+ +
Sbjct: 412 DNATVSKHISAMVDAVFKHYDHDRDGFISQEEFQLI 447
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 689 CSHVILMMSVNSFACFASRWPRDLNLSANSKKSLYEISPSL 567
CSH+ L+ + N+F C + P L A+ KK + + P L
Sbjct: 1756 CSHLCLLNNKNTFTC---KCPMGEKLDASGKKCIDDAKPFL 1793
>AF023454-1|AAB82794.1| 707|Caenorhabditis elegans protein
phosphatase with EF-hands protein.
Length = 707
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 799 LPYLFKXVDADRSGYISVREFKFVFECLG 885
L LF+ +D D SG +S++EF E LG
Sbjct: 634 LETLFRFMDKDNSGQVSMKEFIDACEVLG 662
>AF003389-12|AAM22065.1| 572|Caenorhabditis elegans Phosphatase
with ef hands protein1, isoform b protein.
Length = 572
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 799 LPYLFKXVDADRSGYISVREFKFVFECLG 885
L LF+ +D D SG +S++EF E LG
Sbjct: 499 LETLFRFMDKDNSGQVSMKEFIDACEVLG 527
>AF003389-11|AAC71139.2| 707|Caenorhabditis elegans Phosphatase
with ef hands protein1, isoform a protein.
Length = 707
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 799 LPYLFKXVDADRSGYISVREFKFVFECLG 885
L LF+ +D D SG +S++EF E LG
Sbjct: 634 LETLFRFMDKDNSGQVSMKEFIDACEVLG 662
>AC006830-7|AAK68613.2| 479|Caenorhabditis elegans Hypothetical
protein ZK105.6 protein.
Length = 479
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 313 TCNGSVCHLEDRPRHVKRESREITELPHSSLRRCYSKQH-GRPEIDR 450
TC S C+ D R + + E E+ +S C K H RP++ +
Sbjct: 160 TCMNSTCNAPDLDRRMADDMCEAIEMKNSPFMACQFKIHKERPDLSK 206
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical
protein C11H1.4a protein.
Length = 996
Score = 23.4 bits (48), Expect(2) = 8.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 73 SVCFCSALRVAASRPMAIGVISPV*NSLKN*FLNQ 177
S +CS + VA VI+ +S++N FLNQ
Sbjct: 98 SKTYCSHIEVAPRTEDDYSVIAQSQSSIENEFLNQ 132
Score = 23.0 bits (47), Expect(2) = 8.4
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1
Query: 271 PGVKIQHKLIHTKPTCNGSVCHLEDRPRHVK 363
PGV +Q ++++ P N V D HV+
Sbjct: 148 PGVYVQFRILNIVPASNKPVMLNNDTELHVQ 178
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 23.4 bits (48), Expect(2) = 8.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 73 SVCFCSALRVAASRPMAIGVISPV*NSLKN*FLNQ 177
S +CS + VA VI+ +S++N FLNQ
Sbjct: 98 SKTYCSHIEVAPRTEDDYSVIAQSQSSIENEFLNQ 132
Score = 23.0 bits (47), Expect(2) = 8.4
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1
Query: 271 PGVKIQHKLIHTKPTCNGSVCHLEDRPRHVK 363
PGV +Q ++++ P N V D HV+
Sbjct: 148 PGVYVQFRILNIVPASNKPVMLNNDTELHVQ 178
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,552,962
Number of Sequences: 27780
Number of extensions: 451902
Number of successful extensions: 1190
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -