Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_I18
         (911 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    25   1.3  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        24   1.7  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    22   6.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   6.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   8.9  

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = +1

Query: 244 RRARVLCFYPGVKIQHKLIHTKPTCNGSVCHLEDRPRHVKRESREITELPHSSLRRCYSK 423
           + A VL    G+    +++ T     G+V H+E RP   K+E  +   L    + R Y  
Sbjct: 87  KAALVLRLREGIGSLARILKTIENFKGTVTHVESRPS--KKEGLQFDVLVKVDMTRQYLL 144

Query: 424 Q 426
           Q
Sbjct: 145 Q 145


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 10/38 (26%), Positives = 22/38 (57%)
 Frame = +1

Query: 682 WEQQWGTIDPYNFVTVEQYLEDMHHVLNDKTLKKKAHR 795
           + Q W ++ PY  ++VE    + H   +D+ ++++A R
Sbjct: 151 FRQNWASLQPYKKLSVEVVRRE-HPFWDDQRVEQEAKR 187


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 859 FKFVFECLGLTNEPXAF 909
           FK V +C+ +T+EP  F
Sbjct: 64  FKLVTDCIFVTSEPGYF 80


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +3

Query: 660 HRHHQDDMGATMGHHRPVQ 716
           H HH     A   HHRP Q
Sbjct: 147 HHHHLQST-AVQDHHRPYQ 164


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -1

Query: 587 YEISPSLSTSKILWTVRILRRQN 519
           + I  S++TSK++ + R+  RQN
Sbjct: 266 FTIQSSVTTSKMMVSPRLYDRQN 288


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 248,308
Number of Sequences: 438
Number of extensions: 5868
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29630055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)