Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_I15
         (929 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082...    33   0.24 
05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938     32   0.57 
02_01_0475 + 3422629-3422695,3422960-3423216                           28   9.2  

>05_03_0496 +
           14706959-14707020,14707173-14707538,14708070-14708209,
           14708319-14708566,14708814-14708946,14709096-14709159,
           14709284-14709380,14709505-14709607,14709702-14709838,
           14710063-14710152,14710240-14710401
          Length = 533

 Score = 33.5 bits (73), Expect = 0.24
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +1

Query: 61  YSXFFXFFFXFLFFXY*FFFXXWVGPXGFC 150
           Y+ FF FFF F FF + FFF  +     +C
Sbjct: 85  YAFFFFFFFFFFFFFFFFFFFFFFSGDVYC 114


>05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938
          Length = 331

 Score = 32.3 bits (70), Expect = 0.57
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = +1

Query: 70  FFXFFFXFLFFXY*FFFXXWVGPXGFCSLCSKSQTWFQSSRKACL 204
           FF FFF F FF + FFF  +       S  S+SQ    +   A L
Sbjct: 66  FFFFFFFFFFFFFFFFFFFFFDRASCVSSYSRSQVELLAENPAVL 110



 Score = 29.5 bits (63), Expect = 4.0
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 49  LNSXYSXFFXFFFXFLFFXY*FFF 120
           + S    FF FFF F FF + FFF
Sbjct: 56  VGSKEDFFFFFFFFFFFFFFFFFF 79



 Score = 29.1 bits (62), Expect = 5.3
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +1

Query: 70  FFXFFFXFLFFXY*FFF 120
           FF FFF F FF + FFF
Sbjct: 64  FFFFFFFFFFFFFFFFF 80


>02_01_0475 + 3422629-3422695,3422960-3423216
          Length = 107

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = -1

Query: 230 DXRAYEFQQRQAFRXDWNQVCDFEQREQKPXGPTQXXKKNQ*XKNKKXKKXKKK 69
           D  AY F+ +   +  +  +  FE+ ++K     +  KK +  K KK KK KKK
Sbjct: 18  DLDAYGFRVQVVLQLAYT-IFGFEEGKKKKKKKKKKKKKKKKKKKKKKKKKKKK 70


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,381,862
Number of Sequences: 37544
Number of extensions: 248112
Number of successful extensions: 575
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 539
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)