Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_I12
         (919 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0879 - 32444967-32445250,32445643-32445674,32445752-324458...    32   0.73 
08_01_0410 + 3661304-3661383,3661494-3661673,3661757-3661870,366...    31   1.7  
12_02_0675 + 21814048-21814368                                         29   6.8  
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037...    28   9.0  

>02_05_0879 -
           32444967-32445250,32445643-32445674,32445752-32445809,
           32445840-32445913,32446004-32446088,32447054-32447735
          Length = 404

 Score = 31.9 bits (69), Expect = 0.73
 Identities = 20/63 (31%), Positives = 23/63 (36%)
 Frame = +3

Query: 270 GPKFFPIGVSPPFPXNHHSRXRRTWGNPRKAKARNTPRPANXGPGSISGXSHLVKGPXIA 449
           GP  FP    PP   NH S        P  A+A     P N G  S+ G S  +     A
Sbjct: 311 GPHQFPELTEPPTTVNHDSTFLPPLSAPGPAEAGGAIPPPNSGSPSVQGGSFTLPKVSTA 370

Query: 450 QXP 458
             P
Sbjct: 371 NGP 373


>08_01_0410 +
           3661304-3661383,3661494-3661673,3661757-3661870,
           3661975-3662133,3662193-3662243,3662838-3663018,
           3663102-3663228,3663322-3663431,3663529-3663667,
           3663767-3663876,3664002-3664071,3664247-3664320,
           3664458-3664553,3664682-3664777,3665041-3665168,
           3665422-3665656,3665743-3665910,3666274-3666381,
           3666468-3666617,3666905-3667015,3667118-3667297,
           3667427-3667555,3667819-3667914,3668108-3668293,
           3668431-3668603,3668720-3668921
          Length = 1150

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
 Frame = +1

Query: 268 RDRSFFLLGCHPLFXSITIPGSEEHGGIQERXKPEIPHARQTKAP---VQFPVXAIWLRV 438
           +  +F  +G H  F  +  P      G      P +PHA   + P   VQ P  A +L+ 
Sbjct: 244 KSAAFPPMGAHAPFQPVVSPSPNAIAGWMTNANPSLPHAAVAQGPPGLVQPPNTAAFLKH 303

Query: 439 PXLP 450
           P  P
Sbjct: 304 PRTP 307


>12_02_0675 + 21814048-21814368
          Length = 106

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 18/58 (31%), Positives = 23/58 (39%)
 Frame = +3

Query: 285 PIGVSPPFPXNHHSRXRRTWGNPRKAKARNTPRPANXGPGSISGXSHLVKGPXIAQXP 458
           P G  PP P   H R +  +  PRK       R     PG +   S  +K   +AQ P
Sbjct: 31  PPGGLPPTPGGVHLRRKGPYRRPRKP---TEVRSQAKCPGDLRAQSRALKATELAQGP 85


>04_04_0233 +
           23801944-23802598,23802914-23803047,23803548-23803730,
           23804145-23804318
          Length = 381

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 285 PIGVSPPFPXNHHSRXRRTWGNPRKAKARNTPRP 386
           P    PP P +HH   RR   + +K K +  P+P
Sbjct: 32  PSDPPPPPPPHHHHHHRRRHRHSKKPKPQPQPQP 65


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,090,875
Number of Sequences: 37544
Number of extensions: 291051
Number of successful extensions: 499
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 465
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)