Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_I11
         (944 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0946 + 7975519-7976550,7977092-7977141,7977342-7977462           30   3.1  
05_04_0226 + 19215091-19215172,19215281-19215394,19215508-192155...    29   5.4  
12_02_0695 + 22220054-22220056,22221226-22221276,22221415-222215...    28   9.4  
07_03_0295 - 16345592-16345947,16346265-16346697                       28   9.4  

>07_01_0946 + 7975519-7976550,7977092-7977141,7977342-7977462
          Length = 400

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 8/23 (34%), Positives = 18/23 (78%)
 Frame = -3

Query: 597 MFYHQSYKATVRELWFVLFYDNK 529
           + YHQSY+++  +LW+++ Y+ +
Sbjct: 302 LVYHQSYRSSTIDLWYLIDYETR 324


>05_04_0226 +
           19215091-19215172,19215281-19215394,19215508-19215590,
           19215682-19215820,19215862-19216191,19216414-19216693,
           19216795-19216956,19217134-19217349,19217458-19217495,
           19217597-19217760,19217833-19217946,19218042-19218083,
           19218180-19218983
          Length = 855

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 26/86 (30%), Positives = 39/86 (45%)
 Frame = +3

Query: 429 DLPSPLHLGASELDPHPSPDSPHETPVLATKERLCYRKIAQTKAL*L*LYSFDDKTCDIK 608
           D PSP   G ++ D  P P    E PV++ +E        + +AL   L  F D+  D  
Sbjct: 44  DPPSPDCCGGADPDHAPPPSPKGEEPVVSAEEEQAAVAGGEGEALRSFLEEFGDQGDDSL 103

Query: 609 SPKNLLSPNINAIVGNYQNYLSSLRY 686
            P    SP +  I  N  + L++LR+
Sbjct: 104 VP----SPKLKQI--NTPDRLAALRF 123


>12_02_0695 +
           22220054-22220056,22221226-22221276,22221415-22221501,
           22222064-22222144,22222241-22222353,22222482-22222531,
           22222790-22222857
          Length = 150

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2

Query: 754 LKLF*CPDYILKLYYKDLKSK 692
           LKLF CP  + + +YKDLK K
Sbjct: 36  LKLFQCPKDLAQEHYKDLKEK 56


>07_03_0295 - 16345592-16345947,16346265-16346697
          Length = 262

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -3

Query: 825 IKYKYINISPKTLINEQPFKLIHY 754
           ++Y Y NIS +T + E PFK+++Y
Sbjct: 157 LEYMY-NISYRTALKETPFKIVYY 179


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,714,796
Number of Sequences: 37544
Number of extensions: 337869
Number of successful extensions: 894
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2717819680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)