Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_I11
         (944 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC005176-1|AAH05176.1|  570|Homo sapiens transmembrane 7 superfa...    68   6e-11
AK002031-1|BAA92046.1|  570|Homo sapiens protein ( Homo sapiens ...    68   6e-11
AB032470-1|BAA92856.1|  570|Homo sapiens seven transmembrane pro...    68   6e-11

>BC005176-1|AAH05176.1|  570|Homo sapiens transmembrane 7
           superfamily member 3 protein.
          Length = 570

 Score = 67.7 bits (158), Expect = 6e-11
 Identities = 29/102 (28%), Positives = 54/102 (52%)
 Frame = +2

Query: 104 ISXEDLNYWLIFALIVLVCAIIMISATFEANILACAILGGYAVIYPIDYYIGSNLKYILI 283
           I  +D  +W+ F+ I ++  ++ +      NIL C ++G Y+V+  ID Y  ++L YI +
Sbjct: 401 IFHDDGVFWVTFSCIAILIPVVFMGCLRILNILTCGVIGSYSVVLAIDSYWSTSLSYITL 460

Query: 284 NTMRRATVPNFKSATLVLNYQYKDLVLTLLWASLTVTSFAYQ 409
           N ++RA   +F  A   + +Q  D ++  +W  L V+    Q
Sbjct: 461 NVLKRALNKDFHRAFTNVPFQTNDFIILAVWGMLAVSGITLQ 502


>AK002031-1|BAA92046.1|  570|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11169 fis, clone PLACE1007282. ).
          Length = 570

 Score = 67.7 bits (158), Expect = 6e-11
 Identities = 29/102 (28%), Positives = 54/102 (52%)
 Frame = +2

Query: 104 ISXEDLNYWLIFALIVLVCAIIMISATFEANILACAILGGYAVIYPIDYYIGSNLKYILI 283
           I  +D  +W+ F+ I ++  ++ +      NIL C ++G Y+V+  ID Y  ++L YI +
Sbjct: 401 IFHDDGVFWVTFSCIAILIPVVFMGCLRILNILTCGVIGSYSVVLAIDSYWSTSLSYITL 460

Query: 284 NTMRRATVPNFKSATLVLNYQYKDLVLTLLWASLTVTSFAYQ 409
           N ++RA   +F  A   + +Q  D ++  +W  L V+    Q
Sbjct: 461 NVLKRALNKDFHRAFTNVPFQTNDFIILAVWGMLAVSGITLQ 502


>AB032470-1|BAA92856.1|  570|Homo sapiens seven transmembrane
           protein TM7SF3 protein.
          Length = 570

 Score = 67.7 bits (158), Expect = 6e-11
 Identities = 29/102 (28%), Positives = 54/102 (52%)
 Frame = +2

Query: 104 ISXEDLNYWLIFALIVLVCAIIMISATFEANILACAILGGYAVIYPIDYYIGSNLKYILI 283
           I  +D  +W+ F+ I ++  ++ +      NIL C ++G Y+V+  ID Y  ++L YI +
Sbjct: 401 IFHDDGVFWVTFSCIAILIPVVFMGCLRILNILTCGVIGSYSVVLAIDSYWSTSLSYITL 460

Query: 284 NTMRRATVPNFKSATLVLNYQYKDLVLTLLWASLTVTSFAYQ 409
           N ++RA   +F  A   + +Q  D ++  +W  L V+    Q
Sbjct: 461 NVLKRALNKDFHRAFTNVPFQTNDFIILAVWGMLAVSGITLQ 502


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,499,570
Number of Sequences: 237096
Number of extensions: 1912065
Number of successful extensions: 7394
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7394
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12436574528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)