Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_I09
         (925 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0218 + 18219956-18220555                                         33   0.32 
06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    31   1.7  
09_04_0424 + 17444261-17444665,17445974-17446367,17447367-174474...    29   6.9  
01_01_1045 - 8233895-8234632                                           29   6.9  
05_03_0045 + 7752571-7752599,7754013-7754078,7754228-7754228,775...    28   9.1  
03_04_0061 - 16949038-16950006                                         28   9.1  

>06_03_0218 + 18219956-18220555
          Length = 199

 Score = 33.1 bits (72), Expect = 0.32
 Identities = 22/63 (34%), Positives = 27/63 (42%)
 Frame = -1

Query: 802 NGGFVHTAQLGANDLHRTEIPTA*XMRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKR 623
           NGG     ++ A    +T  P     R R   R E  G  + KR+GR R    G  RGKR
Sbjct: 81  NGGLTEGEEVAARPREKTARPDG--ARARRERRLEAAG--AEKREGRRRGGSSGGLRGKR 136

Query: 622 LVS 614
             S
Sbjct: 137 RAS 139


>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +3

Query: 522 CWRFSIXSXPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 680
           CWR  +        T  D Q    +    +KD    P + PSC L+F P   P
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQP 335


>09_04_0424 +
           17444261-17444665,17445974-17446367,17447367-17447425,
           17447507-17447637,17447737-17447833,17447936-17448100
          Length = 416

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +3

Query: 765 FAPSWAVCTNPPFSPTAAPYPVTIVL-SPXP 854
           F P  AV   PP  P AAP PV + + SP P
Sbjct: 67  FVPFHAVGPPPPPQPRAAPPPVAVAMGSPAP 97


>01_01_1045 - 8233895-8234632
          Length = 245

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +1

Query: 319 GRGGLRIGRSSASSLTDSAAPGSVRLRGTGSAHSKAVI 432
           GRGG R+ R  A     +A P +  L  T  AH + ++
Sbjct: 80  GRGGRRVRRRMAQEQEAAALPSAPALTSTDGAHQEPLV 117


>05_03_0045 +
           7752571-7752599,7754013-7754078,7754228-7754228,
           7757535-7758380
          Length = 313

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 795 PPFSPTAAPYPVTIVLSPXPVXPT 866
           PP  PTA   P  +V  P PV P+
Sbjct: 244 PPVQPTAVVQPTAVVSVPAPVAPS 267


>03_04_0061 - 16949038-16950006
          Length = 322

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +1

Query: 604 RTIKIPGVSPWKLPRALSCSDPAAYRIPVRLSPFGKRGA 720
           RT+K PG+   ++PRA+  + P  Y   VR +   +R A
Sbjct: 255 RTMKGPGLGGARVPRAVFRASPRRYYAAVRTARKARRSA 293


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,419,989
Number of Sequences: 37544
Number of extensions: 547113
Number of successful extensions: 1730
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1726
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)