Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_I09
(925 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC064495-1|AAH64495.1| 299|Homo sapiens RCOR1 protein protein. 32 3.4
BC051003-1|AAH51003.1| 293|Homo sapiens RCOR1 protein protein. 32 3.4
AF155595-1|AAF01498.1| 482|Homo sapiens CoREST protein protein. 32 3.4
Z48615-1|CAA88531.1| 953|Homo sapiens serine/threonine kinase w... 31 7.8
X90846-1|CAA62351.1| 954|Homo sapiens mixed lineage kinase 2 pr... 31 7.8
BC077726-1|AAH77726.1| 1151|Homo sapiens sema domain, seven thro... 31 7.8
AY358124-1|AAQ88491.1| 1092|Homo sapiens SEMA5B protein. 31 7.8
AB040878-1|BAA95969.1| 1202|Homo sapiens KIAA1445 protein protein. 31 7.8
>BC064495-1|AAH64495.1| 299|Homo sapiens RCOR1 protein protein.
Length = 299
Score = 31.9 bits (69), Expect = 3.4
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 700 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 572
EKG +VSGKR+GRN A ++ + +C SP T AS
Sbjct: 3 EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44
>BC051003-1|AAH51003.1| 293|Homo sapiens RCOR1 protein protein.
Length = 293
Score = 31.9 bits (69), Expect = 3.4
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 700 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 572
EKG +VSGKR+GRN A ++ + +C SP T AS
Sbjct: 3 EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44
>AF155595-1|AAF01498.1| 482|Homo sapiens CoREST protein protein.
Length = 482
Score = 31.9 bits (69), Expect = 3.4
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 700 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 572
EKG +VSGKR+GRN A ++ + +C SP T AS
Sbjct: 3 EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44
>Z48615-1|CAA88531.1| 953|Homo sapiens serine/threonine kinase with
SH3 domain, leucine zipper domain and proline rich
protein.
Length = 953
Score = 30.7 bits (66), Expect = 7.8
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = -3
Query: 698 ERRTGIR*AAGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGXGAYGKTPAT 519
ER G+ GS+Q S+ G++P + GFA+ + +F +A G + +P +
Sbjct: 573 ERLKGL--GEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYS 630
Query: 518 RPFYXSWLLAA 486
P Y S L A
Sbjct: 631 TPSYLSVPLPA 641
>X90846-1|CAA62351.1| 954|Homo sapiens mixed lineage kinase 2
protein.
Length = 954
Score = 30.7 bits (66), Expect = 7.8
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = -3
Query: 698 ERRTGIR*AAGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGXGAYGKTPAT 519
ER G+ GS+Q S+ G++P + GFA+ + +F +A G + +P +
Sbjct: 574 ERLKGL--GEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYS 631
Query: 518 RPFYXSWLLAA 486
P Y S L A
Sbjct: 632 TPSYLSVPLPA 642
>BC077726-1|AAH77726.1| 1151|Homo sapiens sema domain, seven
thrombospondin repeats (type 1 and type 1-like),
transmembra protein.
Length = 1151
Score = 30.7 bits (66), Expect = 7.8
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Frame = +2
Query: 629 PPGSSLVRSPVPTLPLTGYLSAFLPSGSVALSHXSRCRYLSSV*VVRSQLGCVHEPPVQ- 805
PPG+ P+ L +S LPS ++ +SH S + +SS QL + + P
Sbjct: 48 PPGARTAEGPIMVLAGPLAVSLLLPSLTLLVSHLSSSQDVSSEPSSEQQLCALSKHPTVA 107
Query: 806 -PDRCALSGNYRLESXPGKXDLSPLAXXPGTGLPNQVXGGA 925
D N+ + PG D S LA P NQ+ GA
Sbjct: 108 FEDLQPWVSNF---TYPGARDFSQLALDPS---GNQLIVGA 142
>AY358124-1|AAQ88491.1| 1092|Homo sapiens SEMA5B protein.
Length = 1092
Score = 30.7 bits (66), Expect = 7.8
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Frame = +2
Query: 629 PPGSSLVRSPVPTLPLTGYLSAFLPSGSVALSHXSRCRYLSSV*VVRSQLGCVHEPPVQ- 805
PPG+ P+ L +S LPS ++ +SH S + +SS QL + + P
Sbjct: 48 PPGARTAEGPIMVLAGPLAVSLLLPSLTLLVSHLSSSQDVSSEPSSEQQLCALSKHPTVA 107
Query: 806 -PDRCALSGNYRLESXPGKXDLSPLAXXPGTGLPNQVXGGA 925
D N+ + PG D S LA P NQ+ GA
Sbjct: 108 FEDLQPWVSNF---TYPGARDFSQLALDPS---GNQLIVGA 142
>AB040878-1|BAA95969.1| 1202|Homo sapiens KIAA1445 protein protein.
Length = 1202
Score = 30.7 bits (66), Expect = 7.8
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Frame = +2
Query: 629 PPGSSLVRSPVPTLPLTGYLSAFLPSGSVALSHXSRCRYLSSV*VVRSQLGCVHEPPVQ- 805
PPG+ P+ L +S LPS ++ +SH S + +SS QL + + P
Sbjct: 99 PPGARTAEGPIMVLAGPLAVSLLLPSLTLLVSHLSSSQDVSSEPSSEQQLCALSKHPTVA 158
Query: 806 -PDRCALSGNYRLESXPGKXDLSPLAXXPGTGLPNQVXGGA 925
D N+ + PG D S LA P NQ+ GA
Sbjct: 159 FEDLQPWVSNF---TYPGARDFSQLALDPS---GNQLIVGA 193
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,561,090
Number of Sequences: 237096
Number of extensions: 2877451
Number of successful extensions: 12014
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12009
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12047931574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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