Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_I08
(898 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 97 8e-22
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 97 8e-22
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 97 8e-22
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 97 8e-22
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 46 2e-06
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 96.7 bits (230), Expect = 8e-22
Identities = 45/116 (38%), Positives = 67/116 (57%)
Frame = +1
Query: 466 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 645
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 646 LEFAIYPAPXVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIXRRNLDIERP 813
+++ P+P VS VVEPYN+ L+ H +E++D + +DNEA+YDI R L + P
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNP 116
Score = 27.9 bits (59), Expect = 0.44
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 810 PTYTNLNRLIGQIVSSIXXSLKFDGALN 893
P+Y +LN L+ +S + L+F G LN
Sbjct: 116 PSYGDLNHLVSLTMSGVTTCLRFPGQLN 143
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 96.7 bits (230), Expect = 8e-22
Identities = 45/116 (38%), Positives = 67/116 (57%)
Frame = +1
Query: 466 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 645
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 646 LEFAIYPAPXVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIXRRNLDIERP 813
+++ P+P VS VVEPYN+ L+ H +E++D + +DNEA+YDI R L + P
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNP 116
Score = 27.9 bits (59), Expect = 0.44
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 810 PTYTNLNRLIGQIVSSIXXSLKFDGALN 893
P+Y +LN L+ +S + L+F G LN
Sbjct: 116 PSYGDLNHLVSLTMSGVTTCLRFPGQLN 143
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 96.7 bits (230), Expect = 8e-22
Identities = 45/116 (38%), Positives = 67/116 (57%)
Frame = +1
Query: 466 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 645
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 646 LEFAIYPAPXVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIXRRNLDIERP 813
+++ P+P VS VVEPYN+ L+ H +E++D + +DNEA+YDI R L + P
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNP 116
Score = 27.9 bits (59), Expect = 0.44
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 810 PTYTNLNRLIGQIVSSIXXSLKFDGALN 893
P+Y +LN L+ +S + L+F G LN
Sbjct: 116 PSYGDLNHLVSLTMSGVTTCLRFPGQLN 143
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 96.7 bits (230), Expect = 8e-22
Identities = 45/116 (38%), Positives = 67/116 (57%)
Frame = +1
Query: 466 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 645
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 646 LEFAIYPAPXVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIXRRNLDIERP 813
+++ P+P VS VVEPYN+ L+ H +E++D + +DNEA+YDI R L + P
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNP 116
Score = 27.9 bits (59), Expect = 0.44
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 810 PTYTNLNRLIGQIVSSIXXSLKFDGALN 893
P+Y +LN L+ +S + L+F G LN
Sbjct: 116 PSYGDLNHLVSLTMSGVTTCLRFPGQLN 143
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 45.6 bits (103), Expect = 2e-06
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +3
Query: 147 MRERISVHVGQAGVQIGNACWE 212
MRE ISVHVGQAGVQIGN CW+
Sbjct: 1 MRECISVHVGQAGVQIGNPCWD 22
Score = 31.5 bits (68), Expect = 0.036
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +1
Query: 202 PAGSFTAWSTASSLMARCPQTRPSGVETILSTLSS 306
P T WS AS+ RCP+TR S ST SS
Sbjct: 19 PCWDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSS 53
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 909,648
Number of Sequences: 2352
Number of extensions: 18868
Number of successful extensions: 43
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96747534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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