Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_I08
         (898 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    28   0.13 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   2.9  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   5.0  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   5.0  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   5.0  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   5.0  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    22   8.7  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    22   8.7  

>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 27.9 bits (59), Expect = 0.13
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 268 PSGVETILSTLSSVETGAGKHVPRAVFVDLEPTV 369
           P G E++ S   ++     +H+P A   D E TV
Sbjct: 406 PDGFESVTSQYKNIREDDARHIPHASVTDSENTV 439


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 337  GVRACQLRSRLKKVLKESSPPPMVL 263
            G+R C     L  VL+ S+P P+VL
Sbjct: 1094 GLRLCLHHRDLPCVLRASTPAPVVL 1118


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -2

Query: 210 PSRHYRSGLR 181
           P RHYRSGL+
Sbjct: 139 PLRHYRSGLK 148


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 273 RWSCLWASGHQAGCRAPGSKAPSRHYR 193
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 273 RWSCLWASGHQAGCRAPGSKAPSRHYR 193
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 273 RWSCLWASGHQAGCRAPGSKAPSRHYR 193
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 329 CLPAPVSTEESVERIVSTPDGL 264
           CLPAP    +S     + PDGL
Sbjct: 47  CLPAPRINSKSPLLSCACPDGL 68


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 329 CLPAPVSTEESVERIVSTPDGL 264
           CLPAP    +S     + PDGL
Sbjct: 47  CLPAPRINSKSPLLSCACPDGL 68


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,481
Number of Sequences: 438
Number of extensions: 5144
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)