Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_I07
         (831 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0584 - 24082867-24082960,24083071-24083191,24083693-240837...    56   3e-08
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   6.0  
04_04_0048 + 22351788-22352177,22353175-22353711                       29   6.0  
08_02_0551 - 18535219-18536134,18536140-18536345                       28   7.9  

>02_04_0584 -
           24082867-24082960,24083071-24083191,24083693-24083786,
           24084675-24084725
          Length = 119

 Score = 56.0 bits (129), Expect = 3e-08
 Identities = 24/69 (34%), Positives = 40/69 (57%)
 Frame = +1

Query: 127 HTILLVQPGPRPETRTYSDYESVNDCMEGVCKIYEEHLKRRNP*YTHYXVRYIPLFDFVX 306
           HTI+L+QP     +RT+ DY S+N  ++G+C +YE  ++  NP   +       L++F+ 
Sbjct: 21  HTIILMQPSQNRASRTFMDYNSINHALDGLCGLYERKIRDINPMVPNITYDITDLYNFID 80

Query: 307 QLAXXNCLV 333
            LA  + LV
Sbjct: 81  GLADISALV 89


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +1

Query: 634 PPPXGGKXFFXPPPP 678
           PPP G K  F PPPP
Sbjct: 552 PPPSGNKPAFSPPPP 566


>04_04_0048 + 22351788-22352177,22353175-22353711
          Length = 308

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 307 GXQNRRVGYIVRDSGCIRGFAFSDVPHIFYT 215
           G   R  G +VRD G  RG + + + H+FYT
Sbjct: 62  GGVMRVAGELVRDGGIYRGLSPAVLRHLFYT 92


>08_02_0551 - 18535219-18536134,18536140-18536345
          Length = 373

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 289 VGYIVRDSGCIRGFAFSDVPHIFYTHP 209
           VGY+ RD+GC+ G + S   H +   P
Sbjct: 192 VGYLGRDAGCMDGLSLSVAAHYYPACP 218


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,711,934
Number of Sequences: 37544
Number of extensions: 335805
Number of successful extensions: 697
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)