Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_I07
         (831 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73098-5|CAA97332.1|  103|Caenorhabditis elegans Hypothetical pr...    75   6e-14
Z46242-10|CAA86333.2|  113|Caenorhabditis elegans Hypothetical p...    60   2e-09

>Z73098-5|CAA97332.1|  103|Caenorhabditis elegans Hypothetical
           protein T21C9.4 protein.
          Length = 103

 Score = 74.9 bits (176), Expect = 6e-14
 Identities = 32/74 (43%), Positives = 49/74 (66%)
 Frame = +1

Query: 121 MSHTILLVQPGPRPETRTYSDYESVNDCMEGVCKIYEEHLKRRNP*YTHYXVRYIPLFDF 300
           MSHTILL+QP    E+R++SDYE+  +C+EG+C++YEE+LK++ P           LF+F
Sbjct: 1   MSHTILLLQPTDNIESRSWSDYENTTECLEGICRVYEEYLKKKVPAQNEITYDISHLFEF 60

Query: 301 VXQLAXXNCLVIXN 342
           +  L   + LV+ N
Sbjct: 61  IDDLKDLSMLVLDN 74


>Z46242-10|CAA86333.2|  113|Caenorhabditis elegans Hypothetical
           protein F35G12.11 protein.
          Length = 113

 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 27/76 (35%), Positives = 51/76 (67%)
 Frame = +1

Query: 124 SHTILLVQPGPRPETRTYSDYESVNDCMEGVCKIYEEHLKRRNP*YTHYXVRYIPLFDFV 303
           SHT+LL+Q  PR ++RT+ DYESV D ++ +CK++E+ L +++     Y V  +  ++F+
Sbjct: 5   SHTVLLIQTSPRLDSRTWGDYESVTDALDALCKMFEDFLSKKSAAPVTYDVSQV--YEFL 62

Query: 304 XQLAXXNCLVIXNLQT 351
            +L+  + ++I N +T
Sbjct: 63  DKLSDVS-MMIFNRET 77


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,437,907
Number of Sequences: 27780
Number of extensions: 250979
Number of successful extensions: 453
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 437
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)