Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_I04
(909 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41110-4|AAA82419.1| 575|Caenorhabditis elegans Hypothetical pr... 32 0.003
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 32 0.49
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 32 0.49
Z79598-1|CAB01867.3| 586|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 29 3.5
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z34802-6|CAB54282.1| 594|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z34802-5|CAA84337.1| 610|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical p... 29 4.6
Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z81467-3|CAC42255.1| 1143|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z81467-2|CAC42254.1| 1147|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z79598-2|CAB01864.1| 738|Caenorhabditis elegans Hypothetical pr... 29 6.1
AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein. 29 6.1
AF195611-1|AAF15530.1| 1147|Caenorhabditis elegans LIN-41B protein. 29 6.1
AF195610-1|AAF15529.1| 1143|Caenorhabditis elegans LIN-41A protein. 29 6.1
AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical ... 29 6.1
Z35598-2|CAA84651.2| 656|Caenorhabditis elegans Hypothetical pr... 28 8.0
>U41110-4|AAA82419.1| 575|Caenorhabditis elegans Hypothetical
protein ZK682.5 protein.
Length = 575
Score = 31.9 bits (69), Expect(2) = 0.003
Identities = 11/45 (24%), Positives = 26/45 (57%)
Frame = +1
Query: 565 QVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETFA 699
Q+ + + + + + + F G++DLY+++L N + ++ P FA
Sbjct: 331 QIQAIVLNKNRLSQVRADFFEGLNDLYSIDLQGNRIDNVQPLGFA 375
Score = 26.6 bits (56), Expect(2) = 0.003
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 775 FLNASSVQELDVSYCNMQYITANTFKN 855
F N ++ LD+SY +Q + +N F+N
Sbjct: 374 FANLPAISHLDISYNLLQTMPSNVFQN 400
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 32.3 bits (70), Expect = 0.49
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 559 LHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETF 696
L + + + + I I P AF G+H+L+ + L NN+ L +TF
Sbjct: 310 LKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNITDLKSDTF 355
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 32.3 bits (70), Expect = 0.49
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 559 LHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHPETF 696
L + + + + I I P AF G+H+L+ + L NN+ L +TF
Sbjct: 310 LKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNITDLKSDTF 355
>Z79598-1|CAB01867.3| 586|Caenorhabditis elegans Hypothetical
protein C44H4.1 protein.
Length = 586
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +1
Query: 559 LHQVATVKIVNSTIGYIAPNAFHGVHD---LYAVNLSNNNLKSLHP 687
L Q+ + + ++ I Y+ NAF H L ++LS NNL ++HP
Sbjct: 131 LKQLKILSLPDNLIEYVQDNAFLSYHSRDSLLKLDLSANNLTAIHP 176
>Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical
protein K07A12.2 protein.
Length = 961
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +1
Query: 391 PRDCICSVSQGYRQAKCSFLEIGTQKFGDDILDLV-VENADPRYPINLDDFMFKKLGLHQ 567
P C C +S+ C+ ++ T I V D + +N D + L +
Sbjct: 27 PEKCDCKISKSMIILSCNGEDVKT------IAQTVGTSQIDELHILNGTDVKIESLPFNG 80
Query: 568 VATVKIVNSTIGYIAPNAFHGVH-DLYAVNLSNNNLKSL 681
+ T+ I+NST+ +P A+ V + + ++ N LK++
Sbjct: 81 LRTIAILNSTLQSFSPTAWRHVEATIEHITINGNELKTV 119
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 469 FGDDILDLVVENADPRYPI-NLDDFMFKKLGLHQVATVKIV-NSTIGYIAPNAFHGVHDL 642
FG L+ E PR+ I ++ MF++ +K + NS + Y+A N FH +
Sbjct: 2091 FGQTPSQLLTEAHPPRHSIMSMAPTMFRRHDEDLCMMMKYISNSPVVYLAANTFHQLPQP 2150
Query: 643 YAVNLSNNNLKSLH 684
V ++ N + SL+
Sbjct: 2151 TVVGVAQNLVFSLN 2164
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
F10F2.1 protein.
Length = 2507
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 469 FGDDILDLVVENADPRYPI-NLDDFMFKKLGLHQVATVKIV-NSTIGYIAPNAFHGVHDL 642
FG L+ E PR+ I ++ MF++ +K + NS + Y+A N FH +
Sbjct: 2091 FGQTPSQLLTEAHPPRHSIMSMAPTMFRRHDEDLCMMMKYISNSPVVYLAANTFHQLPQP 2150
Query: 643 YAVNLSNNNLKSLH 684
V ++ N + SL+
Sbjct: 2151 TVVGVAQNLVFSLN 2164
>Z34802-6|CAB54282.1| 594|Caenorhabditis elegans Hypothetical
protein M88.6b protein.
Length = 594
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 556 GLHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSL 681
G+ + + + N + I AF G++ L + LSNNNL+++
Sbjct: 197 GMKNLKKLTLQNCNLEIIQKGAFRGLNSLEQLILSNNNLENI 238
>Z34802-5|CAA84337.1| 610|Caenorhabditis elegans Hypothetical
protein M88.6a protein.
Length = 610
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 556 GLHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSL 681
G+ + + + N + I AF G++ L + LSNNNL+++
Sbjct: 197 GMKNLKKLTLQNCNLEIIQKGAFRGLNSLEQLILSNNNLENI 238
>Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical
protein T23G11.6a protein.
Length = 653
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 793 VQELDVSYCNMQYITANTFKN 855
++ELD+S CN+ I NTF+N
Sbjct: 400 LEELDLSKCNISNIVENTFEN 420
>Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical
protein T23G11.6b protein.
Length = 616
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 793 VQELDVSYCNMQYITANTFKN 855
++ELD+S CN+ I NTF+N
Sbjct: 400 LEELDLSKCNISNIVENTFEN 420
>Z81467-3|CAC42255.1| 1143|Caenorhabditis elegans Hypothetical
protein C12C8.3b protein.
Length = 1143
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/29 (55%), Positives = 16/29 (55%)
Frame = +3
Query: 615 QCFPWCP*PLRSQPIQQQPKEPSS*DVCE 701
Q FP P PL SQP QQQP P CE
Sbjct: 348 QTFP-IPSPLGSQPQQQQPMGPIQCQGCE 375
>Z81467-2|CAC42254.1| 1147|Caenorhabditis elegans Hypothetical
protein C12C8.3a protein.
Length = 1147
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/29 (55%), Positives = 16/29 (55%)
Frame = +3
Query: 615 QCFPWCP*PLRSQPIQQQPKEPSS*DVCE 701
Q FP P PL SQP QQQP P CE
Sbjct: 348 QTFP-IPSPLGSQPQQQQPMGPIQCQGCE 375
>Z79598-2|CAB01864.1| 738|Caenorhabditis elegans Hypothetical
protein C44H4.2 protein.
Length = 738
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 556 GLHQVATVKIVNSTIGYIAPNA-FHGVHDLYAVNLSNNNLKSLHPETF 696
GL + + + N++I I F ++ LY +NL +N + S+H TF
Sbjct: 97 GLPNLLRLDLSNNSIVEIQEQEIFPNLNKLYDINLGSNKIFSIHTSTF 144
>AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein.
Length = 542
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +1
Query: 577 VKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHP 687
+ I +S + +I P+AF+ + L ++LSNN L+ + P
Sbjct: 314 LSISSSALTHIHPSAFNPIPPLSHLDLSNNELRYVAP 350
>AF195611-1|AAF15530.1| 1147|Caenorhabditis elegans LIN-41B protein.
Length = 1147
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/29 (55%), Positives = 16/29 (55%)
Frame = +3
Query: 615 QCFPWCP*PLRSQPIQQQPKEPSS*DVCE 701
Q FP P PL SQP QQQP P CE
Sbjct: 348 QTFP-IPSPLGSQPQQQQPMGPIQCQGCE 375
>AF195610-1|AAF15529.1| 1143|Caenorhabditis elegans LIN-41A protein.
Length = 1143
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/29 (55%), Positives = 16/29 (55%)
Frame = +3
Query: 615 QCFPWCP*PLRSQPIQQQPKEPSS*DVCE 701
Q FP P PL SQP QQQP P CE
Sbjct: 348 QTFP-IPSPLGSQPQQQQPMGPIQCQGCE 375
>AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical
protein Y71F9B.8 protein.
Length = 542
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +1
Query: 577 VKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKSLHP 687
+ I +S + +I P+AF+ + L ++LSNN L+ + P
Sbjct: 314 LSISSSALTHIHPSAFNPIPPLSHLDLSNNELRYVAP 350
>Z35598-2|CAA84651.2| 656|Caenorhabditis elegans Hypothetical
protein F10F2.4 protein.
Length = 656
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +1
Query: 772 YFLNASSVQELDVSYCNMQYITANTFKNMPGFDVLE 879
+FL +++ L +S C M I +TF +PG +V++
Sbjct: 66 HFLFHPNLRVLRMSRCGMHEIPGSTFLPLPGLEVID 101
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,306,205
Number of Sequences: 27780
Number of extensions: 405656
Number of successful extensions: 1196
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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