Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_H18
         (930 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   3.0  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   6.9  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   9.1  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 771 LPWKTTEEAVRDYXSSLGDLLMVQVKRDTRT 679
           + W   +EAV +    LG L+MV  ++D  T
Sbjct: 103 MSWPVKKEAVVEGDLVLGGLMMVHERQDRLT 133


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 374 PHKDLATSGSXNVTKLNARKGRGTNTSV 457
           PH D+AT+G   +  L  +    TNT V
Sbjct: 176 PH-DVATTGKGELVSLTVQAMDSTNTMV 202


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -1

Query: 222 ESKPYLKXX*TVPPVXHKPTLLIAF 148
           ++K YL    T P   H P L+  F
Sbjct: 435 DAKKYLPERWTTPTTPHSPLLVAPF 459


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,510
Number of Sequences: 438
Number of extensions: 4475
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30355689
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)