Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_H16
         (915 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr...    30   2.0  
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro...    30   2.0  
AL033514-10|CAE47472.1|  436|Caenorhabditis elegans Hypothetical...    30   2.0  
AL033514-9|CAA22098.1|  605|Caenorhabditis elegans Hypothetical ...    30   2.0  
Z73969-4|CAA98235.2|  428|Caenorhabditis elegans Hypothetical pr...    30   2.7  
U41107-4|AAK73878.1|  876|Caenorhabditis elegans Hypothetical pr...    29   4.6  
U41107-3|AAK73879.1|  925|Caenorhabditis elegans Hypothetical pr...    29   4.6  

>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical
           protein C25D7.3 protein.
          Length = 2150

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +2

Query: 353 KTFLQRRNSKLLLKRLCQQRVTMKATEKR 439
           K FLQ ++ KL+LKRLC++       +KR
Sbjct: 738 KGFLQLQDEKLILKRLCEKEDEWSGKQKR 766


>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger
           protein protein.
          Length = 2150

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +2

Query: 353 KTFLQRRNSKLLLKRLCQQRVTMKATEKR 439
           K FLQ ++ KL+LKRLC++       +KR
Sbjct: 738 KGFLQLQDEKLILKRLCEKEDEWSGKQKR 766


>AL033514-10|CAE47472.1|  436|Caenorhabditis elegans Hypothetical
           protein Y75B8A.9b protein.
          Length = 436

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 421 ESDGEEAFPELEVPEPIEVSKNFWTVSDRKKEVLLDAGALGDV 549
           E D E+A  +  +  P  + K+F T  DR KE+ +D   LG +
Sbjct: 68  EKDEEDAVEKQNIAAP-PLPKSFTTFPDRSKEIEIDTDLLGKI 109


>AL033514-9|CAA22098.1|  605|Caenorhabditis elegans Hypothetical
           protein Y75B8A.9a protein.
          Length = 605

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 421 ESDGEEAFPELEVPEPIEVSKNFWTVSDRKKEVLLDAGALGDV 549
           E D E+A  +  +  P  + K+F T  DR KE+ +D   LG +
Sbjct: 68  EKDEEDAVEKQNIAAP-PLPKSFTTFPDRSKEIEIDTDLLGKI 109


>Z73969-4|CAA98235.2|  428|Caenorhabditis elegans Hypothetical
           protein C12D8.5 protein.
          Length = 428

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 418 YESDGEEAFPELEVPEPIEVSKNFWTVSDRKKEVLL 525
           Y  DG E  PE E+PE  E++  FW +  R +  ++
Sbjct: 189 YHCDGAE--PEWEIPEITEITDGFWHLGGRTEHEVM 222


>U41107-4|AAK73878.1|  876|Caenorhabditis elegans Hypothetical
           protein F55C12.5a protein.
          Length = 876

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -1

Query: 399 KRFRSNFEFLRWRKVFNERWFHIDGSGCPRESGTGKVPKAL 277
           KR RS + F+R  +   ERWFH+    C R   + KV + +
Sbjct: 441 KRGRSIYLFVRAARE-KERWFHLLREACARARNSPKVRRCM 480


>U41107-3|AAK73879.1|  925|Caenorhabditis elegans Hypothetical
           protein F55C12.5b protein.
          Length = 925

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -1

Query: 399 KRFRSNFEFLRWRKVFNERWFHIDGSGCPRESGTGKVPKAL 277
           KR RS + F+R  +   ERWFH+    C R   + KV + +
Sbjct: 490 KRGRSIYLFVRAARE-KERWFHLLREACARARNSPKVRRCM 529


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,538,933
Number of Sequences: 27780
Number of extensions: 453982
Number of successful extensions: 1236
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1236
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)