Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_H11
         (887 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78012-2|CAB01412.1|  120|Caenorhabditis elegans Hypothetical pr...    41   0.001
Z78198-6|CAB01572.2|  848|Caenorhabditis elegans Hypothetical pr...    29   5.9  
AF016688-9|AAN65322.1|  816|Caenorhabditis elegans Hypothetical ...    28   7.8  
AF016688-8|AAB66079.2|  848|Caenorhabditis elegans Hypothetical ...    28   7.8  

>Z78012-2|CAB01412.1|  120|Caenorhabditis elegans Hypothetical
           protein C52E4.2 protein.
          Length = 120

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 14/38 (36%), Positives = 25/38 (65%)
 Frame = +2

Query: 155 MPHFRIETNISRSKIPADFVVKAIPVLAKALGKPEQHV 268
           MP  R+ TN+   K+P DF ++   +LA+++GKP + +
Sbjct: 1   MPMVRVATNLPNEKVPVDFEIRLTDLLARSMGKPRERI 38


>Z78198-6|CAB01572.2|  848|Caenorhabditis elegans Hypothetical
           protein F55C5.7 protein.
          Length = 848

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +2

Query: 152 IMPHFRIET--NISRSKIPADFVVKAIPVLAKALGKPEQHVHNLPRRTYR 295
           + P  R  T  NI   + PAD++V A  ++A A    E+H + L  + Y+
Sbjct: 231 LFPRLRGSTHHNIEIEETPADYLVTAGQLVATAQRAEEEHAYELAFQCYK 280


>AF016688-9|AAN65322.1|  816|Caenorhabditis elegans Hypothetical
           protein F18A12.8b protein.
          Length = 816

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +1

Query: 67  DIEKIVNFAFLLNKSTSSRLKHNNNLKLYN 156
           DIEKI++F   L K   +  +  NN +LYN
Sbjct: 375 DIEKIIDFEIELAKIIVAEDERRNNTRLYN 404


>AF016688-8|AAB66079.2|  848|Caenorhabditis elegans Hypothetical
           protein F18A12.8a protein.
          Length = 848

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +1

Query: 67  DIEKIVNFAFLLNKSTSSRLKHNNNLKLYN 156
           DIEKI++F   L K   +  +  NN +LYN
Sbjct: 375 DIEKIIDFEIELAKIIVAEDERRNNTRLYN 404


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,613,754
Number of Sequences: 27780
Number of extensions: 265437
Number of successful extensions: 863
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)