Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_H10
(917 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 38 0.002
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.011
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.014
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.075
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.075
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.30
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.40
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 28 2.1
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 2.8
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 3.7
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 23 4.4
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 4.9
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 26 6.5
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 6.5
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 6.5
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 26 8.6
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 38.3 bits (85), Expect = 0.002
Identities = 19/47 (40%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = +1
Query: 517 PPPXXXXFXXFXPXPPXGGAPPPXFXPKXXPPPPPG--XXXPPPPPP 651
PPP P P P P PPPPPG PPPPPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 37.5 bits (83), Expect = 0.003
Identities = 21/54 (38%), Positives = 21/54 (38%), Gaps = 7/54 (12%)
Frame = +1
Query: 517 PPPXXXXFXXFXPXPPXGGAPPPXFXPKXXPPPPP-------GXXXPPPPPPRV 657
PPP P P PPP PPPPP G PPPPPP V
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAV 785
Score = 37.5 bits (83), Expect = 0.003
Identities = 19/52 (36%), Positives = 20/52 (38%)
Frame = +2
Query: 551 PPXPXXGGPPPPFFXXKXXPXPPPGXXXPPPPPPGXGXXXYXPXGXFFPKKK 706
PP P GGPPPP PP PPP G Y P P+ K
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEPK 804
Score = 37.1 bits (82), Expect = 0.003
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 4/52 (7%)
Frame = +1
Query: 508 KNXPPPXXXXFXXFXPXPPXGGAPPPXFXPKXXPPPPP----GXXXPPPPPP 651
K+ PPP P PP PPPPP G PPPPPP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 551 PPXPXXGGPPPPFFXXKXXPXPPPGXXXPPPPPPGXGXXXYXP 679
PP P P P P P P PPPPPP G P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGP 775
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.5 bits (78), Expect = 0.011
Identities = 22/60 (36%), Positives = 23/60 (38%), Gaps = 11/60 (18%)
Frame = +1
Query: 508 KNXPPPXXXXFXXFXPXPPXGGA------PPPXFXPKXX-----PPPPPGXXXPPPPPPR 654
K PPP PP G PPP P+ P PP G PPPPPPR
Sbjct: 308 KKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPR 367
Score = 34.3 bits (75), Expect = 0.025
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = +2
Query: 551 PPXPXXGGPPPPFFXXKXXPXPPPGXXXPPPPPP 652
PP P PPP P PP G PPPPPP
Sbjct: 337 PPPP----PPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 33.1 bits (72), Expect = 0.057
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 9/56 (16%)
Frame = +1
Query: 517 PPPXXXXFXXFXPXPPXGGAPPPXFXPKXXP----PPPP-----GXXXPPPPPPRV 657
PPP P PP G + PP P+ P PPP PP PPP +
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAI 395
Score = 31.9 bits (69), Expect = 0.13
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = +1
Query: 505 PKNXPPPXXXXFXXFXPXPPXGG-APPPXFXPKXXPPPPPGXXXPPPPP 648
P + PP P PP APP PP PP PPP P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Frame = +1
Query: 553 PXPPX-GGAPPPXFXPKXXPPPPPGXXXPPPPPPRVXXXXLXPXG 684
P PP + PP P P P G PP PP P G
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAG 462
Score = 26.2 bits (55), Expect = 6.5
Identities = 13/36 (36%), Positives = 13/36 (36%), Gaps = 2/36 (5%)
Frame = +2
Query: 551 PPXPXXG--GPPPPFFXXKXXPXPPPGXXXPPPPPP 652
PP P PP P P PP PP P P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 25.8 bits (54), Expect = 8.6
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +1
Query: 505 PKNXPPPXXXXFXXFXPXPPXGGAPPPXFXPKXXPPPPPGXXXPPPPPP 651
P + PP P P P P PP P G PP PP
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAP-IAPPLPAGMPAAPPLPP 471
Score = 24.6 bits (51), Expect(2) = 1.8
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +1
Query: 517 PPPXXXXFXXFXPXPPXGGAPPPXFXPKXXPPPPPGXXXPPPPPP 651
PPP PP +PP P P PP PPP
Sbjct: 253 PPPIPPPSNGTVSSPP--NSPPRPIAPVSMNPAINSTSKPPLPPP 295
Score = 21.8 bits (44), Expect(2) = 1.8
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = +1
Query: 634 PPPPPPRVXXXXLXPXGFXFSXKKKXP 714
PPPPPP P G S P
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPP 338
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.1 bits (77), Expect = 0.014
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = +1
Query: 505 PKNXPPPXXXXFXXFXPXPPXGGAPPPXFXPKXXPPPPPGXXXPPPPPP 651
P + PP P PP APP PP PP PP P P
Sbjct: 1174 PSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 34.3 bits (75), Expect = 0.025
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Frame = +1
Query: 505 PKNXPPPXXXXFXXFXPXPPXGGAPPPXFXPKXXPP-PPPGXXXPPPPPP 651
P PP P P PP P PP P P PP PPP
Sbjct: 1164 PSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 33.1 bits (72), Expect = 0.057
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = +1
Query: 499 GXPKNXPPPXXXXFXXFXPXPPXGGAPPPXFXPKXXPPPPPGXXXPPPPPPRV 657
G P + PPP P GAPP P P P PP P P V
Sbjct: 1058 GAP-SAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSV 1109
Score = 32.7 bits (71), Expect = 0.075
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +1
Query: 520 PPXXXXFXXFXPXP-PXGGAPPPXFXPKXXPPPPPGXXXPPPPPPRVXXXXLXP 678
PP P P P G PP PP PP PP P P V + P
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Score = 32.3 bits (70), Expect = 0.099
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Frame = +2
Query: 551 PPXPXXGGPPP-PFFXXKXXPXPPPGXXXPPPPPPGXGXXXYXPXGXFFPKKK 706
PP P G PP P P P P PP P P G P P K
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPK 1202
Score = 31.9 bits (69), Expect = 0.13
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +1
Query: 505 PKNXPPPXXXXFXXFXPXPPXGGAPPPXFXPKXXPPPPPGXXXPPPPPPRV 657
P PP P P GAPP PP P PP P P V
Sbjct: 1097 PSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSV 1147
Score = 31.9 bits (69), Expect = 0.13
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = +1
Query: 505 PKNXPPPXXXXFXXFXPXPPXGGAPPPXFXPKXXPP-PPPGXXXPPPPPP 651
P + PP P PP APP PP P P PP P P
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 30.7 bits (66), Expect = 0.30
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +1
Query: 520 PPXXXXFXXFXPXPPXGGAPPPXFXPKXXPPPPPGXXXPPPPPPRV 657
PP P P GAPP PP P PP P P V
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSV 1166
Score = 30.7 bits (66), Expect = 0.30
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Frame = +1
Query: 520 PPXXXXFXXFXPXPPXGGAPPPXFXPKXXPP-PPPGXXXPPPPPPRVXXXXLXP 678
PP P P GAPP PP P P PP P P + P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Score = 29.5 bits (63), Expect = 0.70
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Frame = +1
Query: 520 PPXXXXFXXFXPXPPXGGAPPPXFXPKXXPP-PPPGXXXPPPPPP 651
PP P P A PP P PP P P PP P P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +2
Query: 551 PPXPXXGG-PPPPFFXXKXXPXPPPGXXXPPPPPP 652
PP P G PP P P P P PP P P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAP 1117
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 551 PPXPXXGGPPPPFFXXKXXPXPPPGXXXPPPPPP 652
P P PP P K P P P PP P P
Sbjct: 1004 PAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVP 1037
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 551 PPXPXXGGPPPPFFXXKXXPXPPPGXXXPPPPPPGXG 661
PP P PP P PP PP P P G
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAG 1225
Score = 26.2 bits (55), Expect = 6.5
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +1
Query: 520 PPXXXXFXXFXPXPPXGGAPPPXFXPKXXPPPPPGXXXPPPPPP 651
PP P P APP P P P PPP
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPP 1065
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.7 bits (71), Expect = 0.075
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +1
Query: 553 PXPPXGGAPPPXFXPKXXPPPPPGXXXPPPPPP 651
P P APP P PPPPP PPP P
Sbjct: 1691 PVRPQSAAPPQMSAP--TPPPPPMSVPPPPSAP 1721
Score = 31.5 bits (68), Expect = 0.17
Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 5/36 (13%)
Frame = +1
Query: 559 PPXGGAPPPXFXPKXXPPP---PPGXXXPP--PPPP 651
PP AP P P PPP PP PP PPPP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 30.3 bits (65), Expect = 0.40
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 553 PXPPXGGAPPPXFXPKXXPPPPPGXXXPPPPP 648
P PP PP P PP P G PPPP
Sbjct: 1707 PPPPPMSVPP----PPSAPPMPAGPPSAPPPP 1734
Score = 29.5 bits (63), Expect = 0.70
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = +1
Query: 559 PPXGGAPP-PXFXPKXXPPPPPGXXXPPPPPP 651
PP APP P P PPP P P P P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 25.8 bits (54), Expect = 8.6
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +1
Query: 547 FXPXPPXGGAPPPXFXPKXXPPPPPGXXXPPPPPPRV 657
F P P P+ PP PPPPP V
Sbjct: 1678 FGGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSV 1714
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 32.7 bits (71), Expect = 0.075
Identities = 23/54 (42%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +1
Query: 559 PPXGGAPPPXFXPKXXPPPPPGXXXP--PPPPPRVXXXXLXPXGFXFSXKKKXP 714
PP G PPP PPPPPG P PPPPP P G+ K K P
Sbjct: 5 PP--GNPPP-------PPPPPGFEPPSQPPPPP--------PPGYVKKRKNKTP 41
Score = 31.9 bits (69), Expect = 0.13
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 553 PXPPXGGAPPPXFXPKXXPPPPP 621
P P PPP F P PPPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPP 28
Score = 30.3 bits (65), Expect = 0.40
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2
Query: 617 PPGXXXPPPPPPG 655
PPG PPPPPPG
Sbjct: 5 PPGNPPPPPPPPG 17
Score = 29.1 bits (62), Expect = 0.92
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +1
Query: 553 PXPPXGGAPPPXFXPKXXPPPPPG 624
P PP G PP P PPPPPG
Sbjct: 11 PPPPPPGFEPPSQPP---PPPPPG 31
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 30.7 bits (66), Expect = 0.30
Identities = 17/35 (48%), Positives = 17/35 (48%)
Frame = -3
Query: 654 PGGGGGGXXXPGGGXGXXFXXKXGGGGPPXXGXGG 550
PGG GGG GGG G G GG P G GG
Sbjct: 237 PGGFGGGPGGFGGGLGGFGGGPGGFGGGP-GGHGG 270
Score = 29.9 bits (64), Expect = 0.53
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -3
Query: 654 PGGGGGGXXXPGGGXGXXFXXKXGGGGP 571
PGG GGG GGG G G GGP
Sbjct: 244 PGGFGGGLGGFGGGPGGFGGGPGGHGGP 271
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = -3
Query: 654 PGGGGGGXXXPGGGXGXXFXXKXG-GGGPPXXGXG 553
PGG GG GGG G G GGGP G G
Sbjct: 230 PGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.3 bits (65), Expect = 0.40
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Frame = +1
Query: 574 APPPXFXPKXXPPPP---PGXXXPPPPPP 651
+PPP F P P P PPPPPP
Sbjct: 166 SPPPSFQPPSAAAPATSLPSDYNPPPPPP 194
Score = 29.5 bits (63), Expect = 0.70
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 559 PPXGGAPPPXFXPKXXPPPPPGXXXPPPPPPRV 657
PP PP P P PPPPPP V
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPPAV 199
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1
Query: 580 PPXFXPKXXPPPPPGXXXPPPPPP 651
PP + PK P P PPPPPP
Sbjct: 224 PPTYTPKQADPLP---APPPPPPP 244
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = +1
Query: 553 PXPPXGGAP-PPXFXPKXXPPPPPGXXXPPPPP 648
P PP GAP P P PPG PP P
Sbjct: 504 PLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMP 536
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.5 bits (58), Expect = 2.8
Identities = 19/61 (31%), Positives = 21/61 (34%), Gaps = 4/61 (6%)
Frame = +1
Query: 517 PPPXXXXFXXFXPXPPXGGAPPPXFXPKXXPPPP----PGXXXPPPPPPRVXXXXLXPXG 684
PPP P PP P + PPPP PG PPPP + P
Sbjct: 287 PPPMHHEPGEHMPPPPMHHEP-----GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
Query: 685 F 687
F
Sbjct: 342 F 342
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 4/47 (8%)
Frame = +1
Query: 517 PPPXXXXFXXFXPXPPXGGAPPPXFXPKXXPPPP----PGXXXPPPP 645
PPP P PP P + PPPP PG PPPP
Sbjct: 209 PPPMHHKPGEHMPPPPMHHEP-----GEHMPPPPMHHEPGEHMPPPP 250
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 4/47 (8%)
Frame = +1
Query: 517 PPPXXXXFXXFXPXPPXGGAPPPXFXPKXXPPPP----PGXXXPPPP 645
PPP P PP P + PPPP PG PPPP
Sbjct: 222 PPPMHHEPGEHMPPPPMHHEP-----GEHMPPPPMHHEPGEHMPPPP 263
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 4/47 (8%)
Frame = +1
Query: 517 PPPXXXXFXXFXPXPPXGGAPPPXFXPKXXPPPP----PGXXXPPPP 645
PPP P PP P + PPPP PG PPPP
Sbjct: 235 PPPMHHEPGEHMPPPPMHHEP-----GEHMPPPPMHHEPGEHMPPPP 276
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 4/47 (8%)
Frame = +1
Query: 517 PPPXXXXFXXFXPXPPXGGAPPPXFXPKXXPPPP----PGXXXPPPP 645
PPP P PP P + PPPP PG PPPP
Sbjct: 248 PPPMHHEPGEHMPPPPMHHEP-----GEHMPPPPMHHEPGEHMPPPP 289
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 4/47 (8%)
Frame = +1
Query: 517 PPPXXXXFXXFXPXPPXGGAPPPXFXPKXXPPPP----PGXXXPPPP 645
PPP P PP P + PPPP PG PPPP
Sbjct: 261 PPPMHHEPGEHMPPPPMHHEP-----GEHMPPPPMHHEPGEHMPPPP 302
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 4/47 (8%)
Frame = +1
Query: 517 PPPXXXXFXXFXPXPPXGGAPPPXFXPKXXPPPP----PGXXXPPPP 645
PPP P PP P + PPPP PG PPPP
Sbjct: 274 PPPMHHEPGEHMPPPPMHHEP-----GEHMPPPPMHHEPGEHMPPPP 315
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.1 bits (57), Expect = 3.7
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = -3
Query: 696 GKXKPXGX*XXXPXPGGGGGGXXXPGGGXGXXFXXKXGG-GGPPXXGXGG 550
G KP G GG GG GG G GG GG G GG
Sbjct: 123 GPKKPKGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGG 172
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.4 bits (48), Expect(2) = 4.4
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 613 PPPGXXXPPPPPPRV 657
PPP PPPPPP V
Sbjct: 945 PPP----PPPPPPLV 955
Score = 21.4 bits (43), Expect(2) = 4.4
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +1
Query: 583 PXFXPKXXPPPP 618
P F P PPPP
Sbjct: 942 PAFPPPPPPPPP 953
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 4.9
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +1
Query: 505 PKNXPPPXXXXFXXFXPXPPXGGAPPPXFXPKXXPPPPPGXXXPPPP 645
P PP P P P P PP PP PPPP
Sbjct: 161 PSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPK--VPPPP 205
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 26.2 bits (55), Expect = 6.5
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 584 PFFXXKXXPXPPPGXXXPPPPPP 652
PF + P P PPPPPP
Sbjct: 339 PFAGNQVMPTPQVQGSRPPPPPP 361
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 26.2 bits (55), Expect = 6.5
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -3
Query: 660 PXPGGGGGGXXXPGGGXGXXFXXKXGGGGPPXXGXGG 550
P GGG G GG G F + G GG G GG
Sbjct: 443 PRTGGGSRGGRGGFGGRG-GFGGRGGFGGGRGRGRGG 478
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Frame = +1
Query: 577 PPPXFXPKXXPP-PPPGXXXPPPPPP 651
PPP PK PP P PP PP
Sbjct: 1885 PPPMALPKAGPPSAAPTSALPPAGPP 1910
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 25.8 bits (54), Expect = 8.6
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 575 PPPPFFXXKXXPXPPPGXXXPPPPPPG 655
P P P P G PPPPPG
Sbjct: 269 PGMPAMPMMNVPMGPGGAPLVPPPPPG 295
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,662,015
Number of Sequences: 5004
Number of extensions: 27688
Number of successful extensions: 489
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 466510270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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