Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_H09
(915 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0313 - 19475203-19475244,19475883-19475976,19476933-194771... 111 1e-24
01_01_0826 + 6431621-6431917,6432356-6432505,6432614-6432796,643... 91 9e-19
05_06_0103 + 25597531-25597608,25597692-25597892,25598599-255987... 78 8e-15
01_01_0824 + 6411899-6411931,6412001-6412210,6412302-6412451,641... 70 3e-12
04_04_1546 - 34301905-34302093,34302549-34302911,34303031-343034... 50 2e-06
02_01_0558 + 4109929-4110042,4110989-4111097,4111404-4111563,411... 30 2.9
01_04_0136 + 16506747-16506982,16507128-16507728,16510443-165108... 30 2.9
03_02_0695 + 10472174-10472286,10472390-10473239 29 3.9
04_04_1586 - 34621945-34623366 29 6.8
>06_03_0313 -
19475203-19475244,19475883-19475976,19476933-19477129,
19477254-19477394,19477873-19478073,19478775-19478894,
19479677-19479859,19479946-19480095,19481305-19481508,
19481545-19481547
Length = 444
Score = 111 bits (266), Expect = 1e-24
Identities = 63/154 (40%), Positives = 93/154 (60%), Gaps = 1/154 (0%)
Frame = +3
Query: 282 LVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEALAEKQ 461
LV +A G EEME + +D+LRR V +A LE + ++ SR+V +V D L +AL KQ
Sbjct: 222 LVPIANGTEEMEATMIIDILRRAKANVVVASLEETLEIVASRKVKMVADVLLDDAL--KQ 279
Query: 462 QYDAVILPGGLEGSDSLSKSEK-VGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGRRVT 638
QYD ++LPGGL G+ + +KS+K +G + K E N HG+ +G++ T
Sbjct: 280 QYDLILLPGGLGGAQAYAKSDKLIGLIKKQAEANKLYGAICASPAIALEPHGLLKGKKAT 339
Query: 639 SYPSTRDKLSAGDYTYVEGERVVVDGNVVTSRGP 740
S+P +KLS D + + RVVVDGN++TS+GP
Sbjct: 340 SFPGMWNKLS--DQSECK-NRVVVDGNLITSQGP 370
Score = 89.8 bits (213), Expect = 3e-18
Identities = 61/155 (39%), Positives = 86/155 (55%), Gaps = 2/155 (1%)
Frame = +3
Query: 282 LVILAQGAEEMETVITVDMLRRGGVTVTLAGLE-GSSPVLCSRQVTLVPDKSLTEALAEK 458
LV +A G E ME VITVD+LRR G V++A ++ GS+ V + V L D +L + LA+
Sbjct: 3 LVPIASGTEPMEAVITVDVLRRAGADVSVASVDPGSAQVGGAWGVKLAAD-ALLDDLAD- 60
Query: 459 QQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXH-GVARGRRV 635
++D + LPGG+ GS +L + + ++K H GK G+ G +
Sbjct: 61 AEFDLISLPGGMPGSSNLRDCKLLENMVKKHAGKGKLYAAICAAPAVALGSWGLLNGLKA 120
Query: 636 TSYPSTRDKLSAGDYTYVEGERVVVDGNVVTSRGP 740
T YPS DKL + + VE RV +DGN VTSRGP
Sbjct: 121 TCYPSFMDKLPS-EVNAVE-SRVQIDGNCVTSRGP 153
>01_01_0826 +
6431621-6431917,6432356-6432505,6432614-6432796,
6433305-6433385,6433548-6433586,6433646-6433849,
6433933-6434073,6434270-6434437,6434498-6434518
Length = 427
Score = 91.5 bits (217), Expect = 9e-19
Identities = 56/159 (35%), Positives = 88/159 (55%), Gaps = 2/159 (1%)
Frame = +3
Query: 282 LVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSR-QVTLVPDKSLTEALAEK 458
LV +A G+EEME + +D+LRR G VT+A +E V+ R + L+ D + E A K
Sbjct: 252 LVPVANGSEEMEALNLIDILRRAGANVTVASVEDKLQVVTRRHKFNLIADIMVEE--AAK 309
Query: 459 QQYDAVILPGGLEGSDSLSKSEKVGALLKDH-EDNGKXXXXXXXXXXXXXXHGVARGRRV 635
+++D +++PGGL G+ LS ++ + LLK E N HG+ +G++
Sbjct: 310 REFDLIVMPGGLPGAQKLSSTKVLVDLLKKQAESNKPYGAICASPAYVLEPHGLLKGKKA 369
Query: 636 TSYPSTRDKLSAGDYTYVEGERVVVDGNVVTSRGPAXRT 752
TS+P L+ D + + RVVVDGN++TS+ P T
Sbjct: 370 TSFPPMAHLLT--DQSACD-SRVVVDGNLITSKAPGSAT 405
Score = 72.5 bits (170), Expect = 4e-13
Identities = 55/173 (31%), Positives = 81/173 (46%), Gaps = 7/173 (4%)
Frame = +3
Query: 246 RAFKSRTMS-KSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSP-----VLCSR 407
RAF + K LV +A G E +E T D+L R G VT+A + + V +
Sbjct: 16 RAFAAAAAEPKRVLVPVADGTEPVEAAATADVLNRAGARVTVATADPAGDDRGLLVEAAF 75
Query: 408 QVTLVPDKSLTEALAEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXX 587
V LV D + + E + +D + LPGG+ GS +L + + ++K + G
Sbjct: 76 GVKLVADGRVADL--EGEAFDLIALPGGMPGSANLRDCKVLEKMVKKQAEQGGLYAAICA 133
Query: 588 XXXXXXXH-GVARGRRVTSYPSTRDKLSAGDYTYVEGERVVVDGNVVTSRGPA 743
H G+ +G + T YPS +K +A RVVVD N VTS+GPA
Sbjct: 134 TPAVTLAHWGLLKGLKATCYPSFMEKFTAEIIPV--NSRVVVDRNAVTSQGPA 184
>05_06_0103 +
25597531-25597608,25597692-25597892,25598599-25598748,
25598906-25599019,25599699-25599776,25600008-25600208,
25601312-25601399,25601432-25601742
Length = 406
Score = 78.2 bits (184), Expect = 8e-15
Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 16/168 (9%)
Frame = +3
Query: 282 LVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEALAEKQ 461
L+ +A G+EEME ++ D+LRR V V LA +E S+ ++ S+++ +V DK +++A A
Sbjct: 209 LIPIANGSEEMEIIMLTDVLRRANVNVVLASVEKSTSIVGSQRMRIVADKCISDASA--L 266
Query: 462 QYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHG--------- 614
+YD +ILPGG G++ L KS + LLK+ + G+
Sbjct: 267 EYDLIILPGGPAGAERLHKSSVLKKLLKEQKQTGRMYEAGFTPGDILGLKTLGILYSLAW 326
Query: 615 -------VARGRRVTSYPSTRDKLSAGDYTYVEGERVVVDGNVVTSRG 737
V + + VT++PS ++L+ ++ +VV+DGN++T G
Sbjct: 327 KITAIEIVDQDKTVTAHPSIVNQLTC---EVIDRSKVVIDGNLITGMG 371
Score = 63.3 bits (147), Expect = 3e-10
Identities = 41/100 (41%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Frame = +3
Query: 225 LKTLANYRAFKSRTMSKSALVI-LAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLC 401
L A+ A S T +K +++ +A G EEME VI +LRR G VTLA +E V
Sbjct: 8 LSAAASTAASSSTTPAKKKVLLPIAMGTEEMEAVILAGVLRRAGADVTLASVEDGLEVEA 67
Query: 402 SRQVTLVPDKSLTEALAEKQQYDAVILPGGLEGSDSLSKS 521
SR +V DK + A Q +D V LPGG+ GS L S
Sbjct: 68 SRGSHIVADKRI--AACADQVFDLVALPGGMPGSVRLRDS 105
>01_01_0824 +
6411899-6411931,6412001-6412210,6412302-6412451,
6413787-6413969,6417705-6417779,6417959-6418102,
6418233-6418418,6418515-6418694
Length = 386
Score = 69.7 bits (163), Expect = 3e-12
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 2/163 (1%)
Frame = +3
Query: 270 SKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLE-GSSPVLCSRQVTLVPDKSLTEA 446
+K LV + G E +E + +D+LRR G VT+A + G V V +V D +
Sbjct: 9 TKKVLVPIVAGTEPVEAAVPIDVLRRAGADVTVASADDGELVVEVMYGVRIVADALVAGG 68
Query: 447 LAEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDH-EDNGKXXXXXXXXXXXXXXHGVAR 623
+D ++LPGG+ G+ +L + A+++ H G G+
Sbjct: 69 DCAAAHFDLIVLPGGVPGAANLGGCAALEAMVRRHAATGGLYAAICAAPPLALASWGMLN 128
Query: 624 GRRVTSYPSTRDKLSAGDYTYVEGERVVVDGNVVTSRGPAXRT 752
G + T++P DK + V+ VVVD + VTSRGPA T
Sbjct: 129 GLKATAHPLFVDKFPP-EVAAVDAS-VVVDASAVTSRGPATST 169
Score = 52.8 bits (121), Expect = 4e-07
Identities = 46/154 (29%), Positives = 69/154 (44%), Gaps = 2/154 (1%)
Frame = +3
Query: 282 LVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQ-VTLVPDKSLTEALAEK 458
LV +A G EEME + +D+LRR V +A E + + +R + ++ ++ T + K
Sbjct: 219 LVPVANGTEEMELITIIDVLRRADADVVVASAENAGVEIVARHGMRIITERLNTFSPRLK 278
Query: 459 QQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGK-XXXXXXXXXXXXXXHGVARGRRV 635
QQ GG G+ ++S +EK+ LLK K HG+ G++
Sbjct: 279 QQ-------GGTPGAKTMSSNEKLVTLLKKQAAASKPYGAIGAATAHVLEPHGLLEGKKA 331
Query: 636 TSYPSTRDKLSAGDYTYVEGERVVVDGNVVTSRG 737
GD RVVVDGNV+TS G
Sbjct: 332 ADQ-------DGGDEC---ESRVVVDGNVITSGG 355
>04_04_1546 -
34301905-34302093,34302549-34302911,34303031-34303471,
34304331-34304447,34304540-34304593
Length = 387
Score = 50.4 bits (115), Expect = 2e-06
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Frame = +3
Query: 453 EKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGRR 632
+ YDA+++PGG + L+ ++KV +L+K D K GV +GR+
Sbjct: 270 DASSYDALVIPGG-RAPEYLALNDKVISLVKGFMDKAKPVASICHGQQILSAAGVLQGRK 328
Query: 633 VTSYPSTRDKLSAGDYTYVEG---ERVVVDGNVVT 728
T+YP+ + + G T++E +R DGN+VT
Sbjct: 329 CTAYPAVKLNVVLGGATWLEPNPIDRCFTDGNLVT 363
>02_01_0558 +
4109929-4110042,4110989-4111097,4111404-4111563,
4111721-4111796,4111984-4112109,4112233-4112484
Length = 278
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 333 DMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPD 428
DM+ RG ++ L L G SP L RQ VPD
Sbjct: 201 DMVARGALSCGLGHLGGLSPALNPRQACRVPD 232
>01_04_0136 +
16506747-16506982,16507128-16507728,16510443-16510842,
16513595-16513709,16513776-16514352
Length = 642
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 270 SKSALVILAQGAEEMETVITVDMLRRGG--VTVTLAGLEGSSPVLCSRQVTLVPDKSLT 440
+K A VI++ E ET+ V +L + ++ +L L+G SP LC+ + + + SL+
Sbjct: 528 NKEAPVIISDKLSEDETIRLVTVLEKHHSIMSCSLQDLKGISPALCTHCIPIELESSLS 586
>03_02_0695 + 10472174-10472286,10472390-10473239
Length = 320
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 663 LSAGDYTYVEGERVVVDGNVVTSR 734
L++ D Y+ G +VVDG V TSR
Sbjct: 292 LASDDSRYISGHNLVVDGGVTTSR 315
>04_04_1586 - 34621945-34623366
Length = 473
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 275 VCVSDFGAGCRGDGDSYNC*YAETRRGNSYS 367
+C + G GC G GD+ C Y+ T SY+
Sbjct: 189 ICRTLSGTGCGGGGDAGKCDYSVTYGDGSYT 219
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,662,619
Number of Sequences: 37544
Number of extensions: 342411
Number of successful extensions: 1090
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1077
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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