Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_H08
         (932 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646...    26   0.99 
07_03_1382 - 26170563-26170631,26171151-26171843                       24   5.0  
10_06_0170 + 11431540-11432259,11434552-11434644,11434739-114348...    29   5.3  
02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060     29   5.3  
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           24   9.7  

>04_03_0660 +
           18463011-18463322,18463424-18463516,18464500-18464607,
           18464892-18465044,18465256-18465354,18465443-18465571,
           18465987-18466166,18466208-18466246,18466247-18466363,
           18466445-18466609
          Length = 464

 Score = 26.2 bits (55), Expect(2) = 0.99
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -1

Query: 701 PPPPPPXXXXGXGG 660
           PPPPPP    G GG
Sbjct: 64  PPPPPPARSGGGGG 77



 Score = 23.8 bits (49), Expect(2) = 0.99
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -1

Query: 704 PPPPPPP 684
           PPPPPPP
Sbjct: 52  PPPPPPP 58


>07_03_1382 - 26170563-26170631,26171151-26171843
          Length = 253

 Score = 23.8 bits (49), Expect(2) = 5.0
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -1

Query: 704 PPPPPPP 684
           PPPPPPP
Sbjct: 184 PPPPPPP 190



 Score = 23.8 bits (49), Expect(2) = 5.0
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 701 PPPPPPXXXXGXG 663
           PPPPPP    G G
Sbjct: 200 PPPPPPPLRTGVG 212


>10_06_0170 +
           11431540-11432259,11434552-11434644,11434739-11434806,
           11434873-11435011,11435179-11435229,11435600-11435675,
           11436216-11436274
          Length = 401

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -1

Query: 704 PPPPPPPXXXXGXGG 660
           PPPPPPP    G GG
Sbjct: 2   PPPPPPPLSAAGAGG 16


>02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060
          Length = 794

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -1

Query: 704 PPPPPPPXXXXGXGG 660
           PPPPPPP    G GG
Sbjct: 11  PPPPPPPPFGRGGGG 25


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 23.8 bits (49), Expect(2) = 9.7
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -1

Query: 704 PPPPPPP 684
           PPPPPPP
Sbjct: 349 PPPPPPP 355



 Score = 22.6 bits (46), Expect(2) = 9.7
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -1

Query: 701 PPPPPPXXXXGXGG 660
           P PPPP    G GG
Sbjct: 368 PGPPPPPGAAGRGG 381


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,496,869
Number of Sequences: 37544
Number of extensions: 220089
Number of successful extensions: 10878
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7112
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)