Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_H08
         (932 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    26   0.86 
U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin cyt...    26   0.88 
U58748-9|AAB52969.3|  542|Caenorhabditis elegans Hypothetical pr...    29   4.8  
U58748-8|AAM97986.1|  497|Caenorhabditis elegans Hypothetical pr...    29   4.8  
U58748-7|AAM97987.1|  399|Caenorhabditis elegans Hypothetical pr...    29   4.8  

>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 26.2 bits (55), Expect(2) = 0.86
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -1

Query: 701 PPPPPPXXXXGXGG 660
           PPPPPP    G GG
Sbjct: 649 PPPPPPPPPSGAGG 662



 Score = 23.8 bits (49), Expect(2) = 0.86
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -1

Query: 704 PPPPPPP 684
           PPPPPPP
Sbjct: 631 PPPPPPP 637


>U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform a
           protein.
          Length = 607

 Score = 26.2 bits (55), Expect(2) = 0.88
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -1

Query: 701 PPPPPPXXXXGXGG 660
           PPPPPP    G GG
Sbjct: 475 PPPPPPPPPSGAGG 488



 Score = 23.8 bits (49), Expect(2) = 0.88
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -1

Query: 704 PPPPPPP 684
           PPPPPPP
Sbjct: 457 PPPPPPP 463


>U58748-9|AAB52969.3|  542|Caenorhabditis elegans Hypothetical
           protein ZK180.5a protein.
          Length = 542

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -1

Query: 704 PPPPPPPXXXXGXGG 660
           PPPPPPP    G GG
Sbjct: 65  PPPPPPPPAFGGLGG 79


>U58748-8|AAM97986.1|  497|Caenorhabditis elegans Hypothetical
           protein ZK180.5b protein.
          Length = 497

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -1

Query: 704 PPPPPPPXXXXGXGG 660
           PPPPPPP    G GG
Sbjct: 65  PPPPPPPPAFGGLGG 79


>U58748-7|AAM97987.1|  399|Caenorhabditis elegans Hypothetical
           protein ZK180.5c protein.
          Length = 399

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -1

Query: 704 PPPPPPPXXXXGXGG 660
           PPPPPPP    G GG
Sbjct: 65  PPPPPPPPAFGGLGG 79


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,542,806
Number of Sequences: 27780
Number of extensions: 127222
Number of successful extensions: 2624
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1457
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)