Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_H07
         (892 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92773-1|CAB07131.1|  395|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AF016654-1|AAB66028.1|  731|Caenorhabditis elegans Hypothetical ...    29   3.4  
Z81495-4|CAB04058.1|  171|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AF303268-1|AAG50226.1|  171|Caenorhabditis elegans 2O123 protein.      29   4.5  
Z99281-22|CAE18024.1|  181|Caenorhabditis elegans Hypothetical p...    29   5.9  
U50068-8|AAB37739.1|  865|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z79754-12|CAD57695.1|  440|Caenorhabditis elegans Hypothetical p...    28   7.8  
Z79754-11|CAB02100.1|  478|Caenorhabditis elegans Hypothetical p...    28   7.8  
Z69360-6|CAA93282.1|  599|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z92773-1|CAB07131.1|  395|Caenorhabditis elegans Hypothetical
           protein W08E3.3 protein.
          Length = 395

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
 Frame = +1

Query: 130 RTRDETKTSSRTKYV-IKKSTDWSHSERQSLWKEYEID----YLIQEAKVLLYLV 279
           R  D+TK       V +KK  +     RQ LW E EI+    +L   AK ++YLV
Sbjct: 172 RANDKTKKIEYDTLVRVKKCLEEKKPVRQELWNEKEIEILNKHLFLTAKPIVYLV 226


>AF016654-1|AAB66028.1|  731|Caenorhabditis elegans Hypothetical
           protein C17A2.5 protein.
          Length = 731

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 121 IPNRTRDETKTSSRTKYVIKKSTDWSHSERQSLWKEYEIDY 243
           IP+R  +    +  T+  IK +  W  ++R+SLW  Y  DY
Sbjct: 442 IPSRIENNNNKTKSTEDAIKMNHLWDLNDRKSLWVPY-CDY 481


>Z81495-4|CAB04058.1|  171|Caenorhabditis elegans Hypothetical
           protein F08G2.4 protein.
          Length = 171

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +1

Query: 148 KTSSRTKYVIKKSTDWSHSERQSLWKEYEIDYLIQEAKVLLYLV-LTFHCT 297
           K S +   + KK TDW+   ++  W E ++D L+++ +  L  + L   CT
Sbjct: 74  KASEKILELRKKLTDWNMDPKKRKWIEDDLDSLVRKQESALSRIRLAEKCT 124


>AF303268-1|AAG50226.1|  171|Caenorhabditis elegans 2O123 protein.
          Length = 171

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +1

Query: 148 KTSSRTKYVIKKSTDWSHSERQSLWKEYEIDYLIQEAKVLLYLV-LTFHCT 297
           K S +   + KK TDW+   ++  W E ++D L+++ +  L  + L   CT
Sbjct: 74  KASEKILELRKKLTDWNMDPKKRKWIEDDLDSLVRKQESALSRIRLAEKCT 124


>Z99281-22|CAE18024.1|  181|Caenorhabditis elegans Hypothetical
           protein Y57G11C.41 protein.
          Length = 181

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +1

Query: 382 NRRRLEETYTCISAV-CDITTSILHF 456
           NR+ +EE  TC+  + CD+T S + F
Sbjct: 56  NRKSIEEVQTCVGVLHCDLTKSYMKF 81


>U50068-8|AAB37739.1|  865|Caenorhabditis elegans Hypothetical
           protein C01G5.8 protein.
          Length = 865

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 121 IPNRTRDETKTSSRTKYVIKKSTDWSHSERQS 216
           +P+ + D T+ S   + VIKKS +W +  R+S
Sbjct: 133 MPSESLDVTEISENIEKVIKKSPEWINHRRRS 164


>Z79754-12|CAD57695.1|  440|Caenorhabditis elegans Hypothetical
           protein F25H2.12b protein.
          Length = 440

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +1

Query: 88  YSQNYKSISI*IPNRTRDETKTSSRTKYVIKKSTDWSHSERQSLWKEYEIDYLIQEA 258
           Y + ++      P    +E + S  T +   KST +  S++   W+  EIDYL++EA
Sbjct: 238 YHKEFQCFHFLRPENNENEREISENTSF--GKSTVFPLSKK---WENVEIDYLLREA 289


>Z79754-11|CAB02100.1|  478|Caenorhabditis elegans Hypothetical
           protein F25H2.12a protein.
          Length = 478

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +1

Query: 88  YSQNYKSISI*IPNRTRDETKTSSRTKYVIKKSTDWSHSERQSLWKEYEIDYLIQEA 258
           Y + ++      P    +E + S  T +   KST +  S++   W+  EIDYL++EA
Sbjct: 276 YHKEFQCFHFLRPENNENEREISENTSF--GKSTVFPLSKK---WENVEIDYLLREA 327


>Z69360-6|CAA93282.1|  599|Caenorhabditis elegans Hypothetical
           protein F25H8.6 protein.
          Length = 599

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +2

Query: 509 SITTNSTTH-RQTHNQDYRCVQQFKVNKIQI*SNSEKFIQLIRELRE 646
           S TT    H R  H Q+Y+ VQ+ + N + +    +   +L+RE+ E
Sbjct: 156 SSTTGMIRHLRSCHVQEYQLVQEARQNSMIVKMEEKARAKLLREMNE 202


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,574,858
Number of Sequences: 27780
Number of extensions: 363485
Number of successful extensions: 923
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)