Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_H06
         (812 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0395 - 3502750-3503033,3504844-3505663                           31   1.1  
04_03_0798 + 19798982-19799860                                         29   3.3  
03_04_0051 + 16852980-16852991,16853952-16854033,16854108-16854763     29   5.8  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    24   6.5  
05_04_0011 + 17139322-17139451,17139552-17140174                       25   7.1  
03_02_0122 - 5742530-5743705                                           28   7.7  

>08_01_0395 - 3502750-3503033,3504844-3505663
          Length = 367

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 707 GGGGGXXKKXXXXPXXKKKKKXGGGXXGG 793
           GGGGG  +     P   KK + GGG  GG
Sbjct: 46  GGGGGSSRAGSEQPPPGKKSRGGGGGEGG 74



 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = +2

Query: 704 GGGGGGXXKKXXXXPXXKKKKKXGGGXXGG 793
           GGGGG         P  KK +  GGG  GG
Sbjct: 46  GGGGGSSRAGSEQPPPGKKSRGGGGGEGGG 75


>04_03_0798 + 19798982-19799860
          Length = 292

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +2

Query: 704 GGGGGGXXKKXXXXPXXKKKKKXGGGXXGG 793
           GGGGGG  KK       KKK++      GG
Sbjct: 17  GGGGGGGEKKSSSSSASKKKQQQAAAAEGG 46


>03_04_0051 + 16852980-16852991,16853952-16854033,16854108-16854763
          Length = 249

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/29 (44%), Positives = 13/29 (44%)
 Frame = +2

Query: 707 GGGGGXXKKXXXXPXXKKKKKXGGGXXGG 793
           GGGGG  K     P  K     GGG  GG
Sbjct: 85  GGGGGGAKAHANKPAGKDGSAGGGGGGGG 113


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 24.2 bits (50), Expect(2) = 6.5
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 731 FXXPPPPPPP 702
           +  PPPPPPP
Sbjct: 89  YYQPPPPPPP 98



 Score = 22.6 bits (46), Expect(2) = 6.5
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 734 FFXXPPPPPP 705
           F   PPPPPP
Sbjct: 51  FLAPPPPPPP 60


>05_04_0011 + 17139322-17139451,17139552-17140174
          Length = 250

 Score = 25.4 bits (53), Expect(2) = 7.1
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 731 FXXPPPPPPP 702
           F  PPPPPPP
Sbjct: 101 FQPPPPPPPP 110



 Score = 21.4 bits (43), Expect(2) = 7.1
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 734 FFXXPPPPPP 705
           F   PPPPPP
Sbjct: 65  FQPPPPPPPP 74


>03_02_0122 - 5742530-5743705
          Length = 391

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +2

Query: 704 GGGGGGXXKKXXXXPXXKKKKKXGGGXXGGXFF 802
           GGGGG    +       KKK   GGG  GG  +
Sbjct: 149 GGGGGYGGGRYEEEDNYKKKPTSGGGGYGGGMY 181


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,043,552
Number of Sequences: 37544
Number of extensions: 371684
Number of successful extensions: 15057
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7257
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)