Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_H05
(947 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0485 - 8808139-8808618 39 0.007
03_02_0484 + 8805053-8805538 39 0.007
03_02_0483 - 8804021-8804485 39 0.007
03_02_0478 + 8775892-8776377 37 0.020
02_02_0077 - 6586638-6587165 37 0.020
04_04_0017 + 22176759-22177406 36 0.036
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 36 0.062
01_01_0229 - 1943473-1943922 35 0.082
01_01_0231 + 1951047-1951499 35 0.11
11_02_0041 - 7669692-7670312 34 0.19
02_05_0494 + 29486960-29487454 33 0.25
07_03_1697 - 28795521-28797328,28797430-28797550 33 0.33
01_01_0227 + 1933247-1933699 33 0.44
02_05_1020 - 33561454-33561568,33561839-33562070,33563286-335633... 32 0.58
01_01_0599 - 4448290-4448790 31 1.0
06_01_0318 - 2284481-2284594,2285340-2286044,2286589-2286609,228... 31 1.8
05_06_0034 + 25082875-25084113 31 1.8
01_01_0591 - 4401847-4402063,4402860-4403002,4403339-4403447,440... 30 3.1
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 29 4.1
11_04_0350 - 16658497-16659015 29 7.1
06_01_0613 + 4439829-4439917,4440650-4440738,4441219-4441453,444... 29 7.1
01_01_0228 + 1940149-1940649 29 7.1
09_04_0144 + 15071723-15071993,15072078-15072632,15072671-150726... 28 9.4
05_01_0197 - 1417672-1417899,1418921-1418974,1419267-1419552,142... 28 9.4
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 28 9.4
>03_02_0485 - 8808139-8808618
Length = 159
Score = 38.7 bits (86), Expect = 0.007
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +3
Query: 471 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 584
S +F+RR+ LPE PE +++ + +GVLT+T P++ P
Sbjct: 111 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEP 147
>03_02_0484 + 8805053-8805538
Length = 161
Score = 38.7 bits (86), Expect = 0.007
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +3
Query: 471 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 584
S +F+RR+ LPE PE +++ + +GVLT+T P++ P
Sbjct: 113 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEP 149
>03_02_0483 - 8804021-8804485
Length = 154
Score = 38.7 bits (86), Expect = 0.007
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +3
Query: 471 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 584
S +F+RR+ LPE PE +++ + +GVLT+T P++ P
Sbjct: 106 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEP 142
>03_02_0478 + 8775892-8776377
Length = 161
Score = 37.1 bits (82), Expect = 0.020
Identities = 15/36 (41%), Positives = 27/36 (75%)
Frame = +3
Query: 471 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRK 578
S +F+RR+ LP+ A PE +++ + +GVLT+T P++
Sbjct: 113 SGKFLRRFRLPDNAKPEQIKASM-ENGVLTVTVPKE 147
>02_02_0077 - 6586638-6587165
Length = 175
Score = 37.1 bits (82), Expect = 0.020
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +3
Query: 477 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTG 629
+F+RR+ LPE A + V + DGVLT+T +K P K R V + G
Sbjct: 117 KFMRRFPLPESADLDGVRAEYK-DGVLTVTVDKKPPPEPKKPRVVEVKVAG 166
>04_04_0017 + 22176759-22177406
Length = 215
Score = 36.3 bits (80), Expect = 0.036
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +3
Query: 477 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTG 629
+F R+ LP+ A +++ + L + GVLT+ + PD +KG R V IA G
Sbjct: 141 RFWRQLRLPDNADLDSIAASLDN-GVLTVRFRKLAPDQIKGPRVVGIASAG 190
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 35.5 bits (78), Expect = 0.062
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +3
Query: 471 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 575
S QF+RR+ LPE A + V++ L +GVLT+T P+
Sbjct: 102 SGQFMRRFRLPENAKVDQVKAGL-ENGVLTVTVPK 135
>01_01_0229 - 1943473-1943922
Length = 149
Score = 35.1 bits (77), Expect = 0.082
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +3
Query: 471 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 575
S QF+RR+ LPE A + V++ + +GVLT+T P+
Sbjct: 101 SGQFMRRFRLPENAKVDQVKASM-ENGVLTVTVPK 134
>01_01_0231 + 1951047-1951499
Length = 150
Score = 34.7 bits (76), Expect = 0.11
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +3
Query: 471 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 575
S QF+RR+ LPE A + V++ + +GVLT+T P+
Sbjct: 102 SGQFMRRFRLPENAKVDQVKAGM-ENGVLTVTVPK 135
>11_02_0041 - 7669692-7670312
Length = 206
Score = 33.9 bits (74), Expect = 0.19
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +3
Query: 477 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 584
+F RR+ +P GA V +RL DGVLT+T P KVP
Sbjct: 141 RFWRRFRMPPGADVGRVAARLD-DGVLTVTVP-KVP 174
>02_05_0494 + 29486960-29487454
Length = 164
Score = 33.5 bits (73), Expect = 0.25
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +3
Query: 474 RQFVRRYALPEGAAPETVESRLSSDGVLTITAPRK 578
R V ++ LPE AA + +R++ DGVLT+T P++
Sbjct: 106 RAAVTQFRLPEDAAADEASARMA-DGVLTVTVPKR 139
>07_03_1697 - 28795521-28797328,28797430-28797550
Length = 642
Score = 33.1 bits (72), Expect = 0.33
Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Frame = +1
Query: 496 RCLKARRLRLWNRD---CHQTGYSPSLRRGRCPTPSRERERCPSHRPVPFARRSRQSEEA 666
R L +RR R D CH + PS G CP P ++ C S R R Q A
Sbjct: 339 RGLPSRRYRRCRADHPCCHDARHGPSCHHGCCP-PHHGKQACTSCRGQHCCRPRTQESPA 397
Query: 667 TRR 675
RR
Sbjct: 398 PRR 400
>01_01_0227 + 1933247-1933699
Length = 150
Score = 32.7 bits (71), Expect = 0.44
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +3
Query: 471 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRK 578
S +F RR+ LP GA + V + + +GVLT+T P++
Sbjct: 102 SGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVPKE 136
>02_05_1020 -
33561454-33561568,33561839-33562070,33563286-33563374,
33563856-33563944
Length = 174
Score = 32.3 bits (70), Expect = 0.58
Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 1/90 (1%)
Frame = +1
Query: 415 GTS*WKASTKRRKTSTGIFQGSSSDVTRCLKARRLRLWNRDCHQTGYSPSLRRGRCPTPS 594
G + W+ R +S G +C + + R+C L G+ + S
Sbjct: 60 GKNGWRVELSRNSSSRGGRDRHGGSEMKCYECGETGHFARECRLRIGPGGLGSGKRRSRS 119
Query: 595 RERERCPSHRPVP-FARRSRQSEEATRRNK 681
R R R P +R P + RRS + + R +
Sbjct: 120 RSRSRSPQYRKSPTYGRRSYSPRDRSPRRR 149
>01_01_0599 - 4448290-4448790
Length = 166
Score = 31.5 bits (68), Expect = 1.0
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +3
Query: 477 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 617
+F+R++ LP+ A + + S + DGVLT+T + P K + + +
Sbjct: 118 KFMRKFVLPDNADVDKI-SAVCQDGVLTVTVEKLPPPEPKKPKTIEV 163
>06_01_0318 -
2284481-2284594,2285340-2286044,2286589-2286609,
2287186-2287257,2287762-2287842,2288059-2288133,
2288197-2288484
Length = 451
Score = 30.7 bits (66), Expect = 1.8
Identities = 24/63 (38%), Positives = 31/63 (49%)
Frame = +1
Query: 478 SSSDVTRCLKARRLRLWNRDCHQTGYSPSLRRGRCPTPSRERERCPSHRPVPFARRSRQS 657
SS +V R + RR +RD + G S S RR R +P+R R +HR PF R S
Sbjct: 328 SSRNVDRQGRERR----DRDSDRHGRS-SARRSRSRSPNRGRTEGENHRSSPFGRPPEPS 382
Query: 658 EEA 666
A
Sbjct: 383 NLA 385
>05_06_0034 + 25082875-25084113
Length = 412
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = -2
Query: 673 FSWLLRSVLISLRTGPVCAMGTFLSPLTASGTFLGAVMVSTPSDDSRDSTVSGAAP 506
FS + R VL + P+ A+G LSP S + L A + S+PS S S+ S P
Sbjct: 115 FSQIARIVLGGI-VKPIQALGQILSPAN-SASVLAASVTSSPSSSSSSSSSSPPLP 168
>01_01_0591 -
4401847-4402063,4402860-4403002,4403339-4403447,
4403546-4404707,4405754-4405865,4405980-4406015
Length = 592
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 562 SLRRGRCPTPSRERERCPSHRPVP 633
+LRR R P SR R +C SH P P
Sbjct: 148 ALRRARPPASSRPRYKCYSHPPSP 171
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = +1
Query: 571 RGRCPTPSRERERCPSHRPVPFARRSRQSEEATRRNKR 684
R R +P R RER RP P RSR E RR+ R
Sbjct: 478 RSRSRSPLRYRERGGYRRPSPRHSRSRSPAEHQRRDVR 515
>11_04_0350 - 16658497-16659015
Length = 172
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +3
Query: 543 SDGVLTITAPRKVPDAVKGERKVPIAQTGPVRKEIKTERRSHEKK*KVMKTRYT 704
S+G ++ KV D + K P + +K+ K +++ +KK K K RYT
Sbjct: 5 SEGRSETSSFDKVIDPTNDQGKAPSTEKKKKKKKKKKKKKKKKKKKKKKKVRYT 58
>06_01_0613 +
4439829-4439917,4440650-4440738,4441219-4441453,
4441768-4441771,4441829-4441930
Length = 172
Score = 28.7 bits (61), Expect = 7.1
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = +1
Query: 415 GTS*WKASTKRRKTS-TGIFQGSSSDVTRCLKARRLRLWNRDCHQTGYSPSLRRGRCPTP 591
G + W+ R +S G S ++C + + R+C S L GR +
Sbjct: 60 GKNGWRVELSRNASSGRGGRDRYGSSESKCYECGETGHFARECRLRIGSGGLGSGRRRSR 119
Query: 592 SRERERCPSHRPVP-FARR 645
SR R R P +R P + RR
Sbjct: 120 SRSRSRSPRYRRSPSYGRR 138
>01_01_0228 + 1940149-1940649
Length = 166
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +3
Query: 480 FVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGER 605
+V R LP G E V + VL IT R V KG+R
Sbjct: 52 YVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQR 93
>09_04_0144 +
15071723-15071993,15072078-15072632,15072671-15072681,
15072954-15073012,15073962-15074040
Length = 324
Score = 28.3 bits (60), Expect = 9.4
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +3
Query: 510 AAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTGPVRKEIKTERR 662
AA + S S T P +PD KG+RK+ + GP+ K R+
Sbjct: 55 AAHSSASSSRPSGAASTSDEPSSLPDR-KGKRKLSSEEDGPIESTRKKRRK 104
>05_01_0197 -
1417672-1417899,1418921-1418974,1419267-1419552,
1421768-1422291
Length = 363
Score = 28.3 bits (60), Expect = 9.4
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +1
Query: 550 GYSPSLRRGRCPTPSRERERCPSHRPVPF-ARRSRQSEEATRR 675
G PS RR RC R R R RP P RR R S + RR
Sbjct: 45 GGIPSRRRRRCAWIRRWRRRGGWFRPPPVRIRRGRPSSDPRRR 87
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 28.3 bits (60), Expect = 9.4
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Frame = +1
Query: 526 WNRDCHQTGYS----PSLRRGRCPTPSRERERCPSHRPVPFARRSRQSEEATR 672
W C++ G S PS RRGR S R R S+ RR ++E +R
Sbjct: 129 WKNRCYRRGRSYSRSPSPRRGRSRGRSYSRSRSRSYSRSQSPRRDSRNERRSR 181
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,548,346
Number of Sequences: 37544
Number of extensions: 380329
Number of successful extensions: 1141
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2729534420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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