Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_H03
         (917 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023698-1|AAY85098.1|   82|Drosophila melanogaster IP03474p pro...    51   3e-06
AE013599-2515|AAF57828.1|   82|Drosophila melanogaster CG14483-P...    51   3e-06

>BT023698-1|AAY85098.1|   82|Drosophila melanogaster IP03474p
           protein.
          Length = 82

 Score = 50.8 bits (116), Expect = 3e-06
 Identities = 18/35 (51%), Positives = 28/35 (80%)
 Frame = +2

Query: 239 NQPKYFEEWVTNTKRQIFPPENQHDREAIQKLIQD 343
           NQP+YFEEWVT  KR+++PPE++   E +Q+ I++
Sbjct: 26  NQPEYFEEWVTKKKRELYPPESKSHHEELQRAIRE 60



 Score = 33.9 bits (74), Expect = 0.31
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +1

Query: 163 MGNWKLEVGRMAMYTSFPXWIVLFFQPTKIF*RMGNKYKKTNLP 294
           MG W LEV +M MY +FP  +   F   + F     K K+   P
Sbjct: 1   MGTWVLEVAKMGMYMAFPVTLFHLFNQPEYFEEWVTKKKRELYP 44


>AE013599-2515|AAF57828.1|   82|Drosophila melanogaster CG14483-PA
           protein.
          Length = 82

 Score = 50.8 bits (116), Expect = 3e-06
 Identities = 18/35 (51%), Positives = 28/35 (80%)
 Frame = +2

Query: 239 NQPKYFEEWVTNTKRQIFPPENQHDREAIQKLIQD 343
           NQP+YFEEWVT  KR+++PPE++   E +Q+ I++
Sbjct: 26  NQPEYFEEWVTKKKRELYPPESKSHHEELQRAIRE 60



 Score = 33.9 bits (74), Expect = 0.31
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +1

Query: 163 MGNWKLEVGRMAMYTSFPXWIVLFFQPTKIF*RMGNKYKKTNLP 294
           MG W LEV +M MY +FP  +   F   + F     K K+   P
Sbjct: 1   MGTWVLEVAKMGMYMAFPVTLFHLFNQPEYFEEWVTKKKRELYP 44


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,337,918
Number of Sequences: 53049
Number of extensions: 424674
Number of successful extensions: 733
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4505424660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)