Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_G24
         (1041 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646...    30   2.6  
02_01_0129 - 934865-935152,935241-935490,935965-936105,937175-93...    30   2.6  
05_01_0380 + 2978256-2979284                                           30   3.5  
12_02_1174 - 26696869-26698191                                         29   4.6  
01_05_0423 + 22032940-22033695                                         29   4.6  
06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979     29   8.0  
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542...    29   8.0  
02_04_0567 - 23914330-23914461,23915016-23915136,23915954-239160...    29   8.0  

>04_03_0660 +
           18463011-18463322,18463424-18463516,18464500-18464607,
           18464892-18465044,18465256-18465354,18465443-18465571,
           18465987-18466166,18466208-18466246,18466247-18466363,
           18466445-18466609
          Length = 464

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +1

Query: 859 PPPPXPXPNQPXPXPXSXXR 918
           PPPP P P QP P P    R
Sbjct: 52  PPPPPPPPTQPAPPPPPPAR 71


>02_01_0129 -
           934865-935152,935241-935490,935965-936105,937175-937707
          Length = 403

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +1

Query: 859 PPPPXPXPNQPXPXP 903
           PPPP P P+QP P P
Sbjct: 25  PPPPRPPPHQPQPQP 39


>05_01_0380 + 2978256-2979284
          Length = 342

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = +1

Query: 850 RXXPPPPXPXPNQPXPXPXSXXRXKXQXRTP 942
           R  PPPP P P  P P P    R   +   P
Sbjct: 24  RMPPPPPPPPPPPPPPPPRPFSRKPSEPAAP 54


>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = +1

Query: 859 PPPPXPXPNQPXPXPXSXXRXKXQXRTPXRPXXXXPA 969
           PPPP P P  P P P S      Q +    P    P+
Sbjct: 153 PPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPS 189


>01_05_0423 + 22032940-22033695
          Length = 251

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
 Frame = +1

Query: 847 TRXXPPPPXPXPNQPXPXPXSXXRXKXQXR--TP-XRPXXXXPAXKAAR 984
           T   PPP  P P  P P P +    K Q R  TP  R     PA + AR
Sbjct: 20  TSTTPPPQPPPPPPPPPHPQACAACKHQRRRCTPECRLARYFPANQPAR 68


>06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979
          Length = 304

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/36 (33%), Positives = 13/36 (36%)
 Frame = +1

Query: 859 PPPPXPXPNQPXPXPXSXXRXKXQXRTPXRPXXXXP 966
           PPPP P    P P      + K Q   P  P    P
Sbjct: 59  PPPPQPAKEPPPPTKPKHPKPKQQQHPPPPPPQKPP 94


>03_02_0071 +
           5425722-5427154,5427259-5427464,5428445-5428686,
           5428788-5429570
          Length = 887

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/37 (32%), Positives = 14/37 (37%)
 Frame = +1

Query: 859 PPPPXPXPNQPXPXPXSXXRXKXQXRTPXRPXXXXPA 969
           PPPP P P  P P P        +   P  P    P+
Sbjct: 349 PPPPPPPPPPPPPPPPPKLNTAPKPPPPPPPPPSVPS 385


>02_04_0567 -
           23914330-23914461,23915016-23915136,23915954-23916048,
           23916131-23916301,23917291-23917380,23917636-23918139
          Length = 370

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = +1

Query: 859 PPPPXPXPNQPXPXPXSXXRXKXQXRTP 942
           PPPP P P  P P P        + R P
Sbjct: 42  PPPPPPPPPPPPPPPLEVVSPSPRWRRP 69


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,045,277
Number of Sequences: 37544
Number of extensions: 173636
Number of successful extensions: 2694
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2027
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3071102548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)