Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_G24
         (1041 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    36   0.092
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    36   0.092
AL031583-7|CAB41346.1|  359|Drosophila melanogaster EG:34F3.10 p...    30   6.0  
AE014298-111|AAF45553.2|  359|Drosophila melanogaster CG13358-PA...    30   6.0  

>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 35.9 bits (79), Expect = 0.092
 Identities = 16/41 (39%), Positives = 17/41 (41%)
 Frame = +1

Query: 847 TRXXPPPPXPXPNQPXPXPXSXXRXKXQXRTPXRPXXXXPA 969
           TR  PPPP P P  P P P          R P +P    PA
Sbjct: 73  TRPPPPPPPPQPTPPAPRPSYGPPQTQPPRPPPQPTPSAPA 113



 Score = 31.5 bits (68), Expect = 2.0
 Identities = 16/57 (28%), Positives = 18/57 (31%)
 Frame = +1

Query: 862  PPPXPXPNQPXPXPXSXXRXKXQXRTPXRPXXXXPAXKAARTHSXRXXPXPXXXXXP 1032
            PPP P P+ P P P          R P +P    PA            P P     P
Sbjct: 129  PPPQPTPSAPAPPPSYGPPQTPPPRPPPQPTPSAPAPSYGPPQPQPPAPQPPSPPSP 185



 Score = 30.7 bits (66), Expect = 3.4
 Identities = 18/63 (28%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
 Frame = +1

Query: 847  TRXXPPPPXPXPNQPXPXPXSXXRXK-XQXRTPXRPXXXXPAXKAARTHSXRXXPXPXXX 1023
            T+   PPP P P+ P P P S    +    R P +P    PA   +        P P   
Sbjct: 98   TQPPRPPPQPTPSAPAPPPPSYGPPQTPPPRPPPQPTPSAPAPPPSYGPPQTPPPRPPPQ 157

Query: 1024 XXP 1032
              P
Sbjct: 158  PTP 160


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 35.9 bits (79), Expect = 0.092
 Identities = 16/41 (39%), Positives = 17/41 (41%)
 Frame = +1

Query: 847 TRXXPPPPXPXPNQPXPXPXSXXRXKXQXRTPXRPXXXXPA 969
           TR  PPPP P P  P P P          R P +P    PA
Sbjct: 73  TRPPPPPPPPQPTPPAPRPSYGPPQTQPPRPPPQPTPSAPA 113



 Score = 31.5 bits (68), Expect = 2.0
 Identities = 16/57 (28%), Positives = 18/57 (31%)
 Frame = +1

Query: 862  PPPXPXPNQPXPXPXSXXRXKXQXRTPXRPXXXXPAXKAARTHSXRXXPXPXXXXXP 1032
            PPP P P+ P P P          R P +P    PA            P P     P
Sbjct: 129  PPPQPTPSAPAPPPSYGPPQTPPPRPPPQPTPSAPAPSYGPPQPQPPAPQPPSPPSP 185



 Score = 30.7 bits (66), Expect = 3.4
 Identities = 18/63 (28%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
 Frame = +1

Query: 847  TRXXPPPPXPXPNQPXPXPXSXXRXK-XQXRTPXRPXXXXPAXKAARTHSXRXXPXPXXX 1023
            T+   PPP P P+ P P P S    +    R P +P    PA   +        P P   
Sbjct: 98   TQPPRPPPQPTPSAPAPPPPSYGPPQTPPPRPPPQPTPSAPAPPPSYGPPQTPPPRPPPQ 157

Query: 1024 XXP 1032
              P
Sbjct: 158  PTP 160


>AL031583-7|CAB41346.1|  359|Drosophila melanogaster EG:34F3.10
           protein.
          Length = 359

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +1

Query: 847 TRXXPPPPXPXPNQPXPXP 903
           TR  PPPP P P  P P P
Sbjct: 166 TRRPPPPPLPPPPPPPPRP 184


>AE014298-111|AAF45553.2|  359|Drosophila melanogaster CG13358-PA
           protein.
          Length = 359

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +1

Query: 847 TRXXPPPPXPXPNQPXPXP 903
           TR  PPPP P P  P P P
Sbjct: 166 TRRPPPPPLPPPPPPPPRP 184


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,828,215
Number of Sequences: 53049
Number of extensions: 250769
Number of successful extensions: 2588
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1999
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5310800040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)