Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_G17
         (925 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0517 + 34466743-34466879,34468478-34468588,34468997-344690...    28   9.1  

>03_06_0517 +
           34466743-34466879,34468478-34468588,34468997-34469079,
           34469287-34469404,34469503-34469714,34470167-34470651,
           34470731-34470801,34470898-34470955,34471161-34471192,
           34471193-34471449,34471820-34471974,34472353-34472636,
           34472725-34472842,34473574-34473756,34473848-34474162
          Length = 872

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 20/64 (31%), Positives = 25/64 (39%)
 Frame = +2

Query: 479 SNLRQTEETPSKAEHPKYYGGFQSTFSLAESFVECQQVFDLQQVQYAPRTDQSNDKAEDI 658
           SNL  T+    K EH K  GG      +A S V      D +QV++    D S D     
Sbjct: 429 SNLSFTDRYYDKPEHLKELGGIDIGKYIASSIVVFN--LDTRQVKWTAELDLSTDSGNFT 486

Query: 659 QRGY 670
              Y
Sbjct: 487 AHAY 490


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,500,442
Number of Sequences: 37544
Number of extensions: 349089
Number of successful extensions: 711
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)