Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_G16
(907 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC32A11.03c |phx1||homeobox transcription factor Phx1|Schizosa... 52 1e-07
SPBC21B10.13c |||transcription factor, homeobox type |Schizosacc... 42 9e-05
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 33 0.042
SPBC887.02 |||ClC chloride channel|Schizosaccharomyces pombe|chr... 31 0.23
SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces pom... 30 0.52
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 29 0.69
SPAC637.10c |rpn10|pus1|19S proteasome regulatory subunit Rpn10|... 29 1.2
SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual 28 2.1
SPAC12G12.08 |mrpl6||mitochondrial ribosomal protein subunit L16... 27 2.8
SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regula... 27 2.8
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 27 4.8
SPBC215.10 |||haloacid dehalogenase-like hydrolase|Schizosacchar... 27 4.8
SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces p... 27 4.8
SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|... 27 4.8
SPAC14C4.09 |agn1||glucan endo-1,3-alpha-glucosidase Agn1|Schizo... 26 6.4
SPAC3A12.03c |mug145||ubiquitin-protein ligase E3 |Schizosacchar... 26 6.4
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 26 6.4
SPAC16E8.11c |tfb1||transcription factor TFIIH complex subunit T... 26 6.4
SPAC1565.02c |||GTPase activating protein|Schizosaccharomyces po... 26 8.5
SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 26 8.5
SPBP8B7.20c |||RNA methyltransferase Nop2 |Schizosaccharomyces p... 26 8.5
>SPAC32A11.03c |phx1||homeobox transcription factor
Phx1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 942
Score = 52.0 bits (119), Expect = 1e-07
Identities = 30/81 (37%), Positives = 45/81 (55%)
Frame = +2
Query: 158 SFPAKKSKRIRSAFTTEQINYLENEFKKSHYISAVQRKEIANIVNVPEKVIKIWFQNRRM 337
S A KSK+ R T +Q+ YL EF K R++I +N+PE+ + IWFQNRR
Sbjct: 162 STSAPKSKKQR--LTADQLAYLLREFSKDTNPPPAIREKIGRELNIPERSVTIWFQNRRA 219
Query: 338 REKKELCLIDNYEEDESSQMI 400
+ K LI +E+E +++
Sbjct: 220 KSK----LISRRQEEERQRIL 236
>SPBC21B10.13c |||transcription factor, homeobox type
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 42.3 bits (95), Expect = 9e-05
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Frame = +2
Query: 179 KRIRSAFTTEQINYLENEFKKSHYISAVQRKEIANIV--NVPEKVIKIWFQNRRMREKKE 352
K+ R T + LE F K+ S ++R+E++ + ++ + ++IWFQN+R ++
Sbjct: 34 KKRRRRTTDAEATLLEQYFLKTPKPSLIERQELSKKLKSSMTPRELQIWFQNKRQSLRRS 93
Query: 353 LCLIDNYEEDESSQMIPFVQDPSSYASTSTQDASV---SLPLMSNTVETIPQPGTSKQID 523
CL N E + + + TST A + S PL S +V + I
Sbjct: 94 NCLSRNRLEGTGENSLLRRKSTLTLCETSTGQAELFFQSWPLHSQSV-------VGEMIH 146
Query: 524 DLNKSYDKDNEEQFLI 571
Y+K+N++Q ++
Sbjct: 147 HEQDDYNKENKQQKVV 162
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 33.5 bits (73), Expect = 0.042
Identities = 33/160 (20%), Positives = 68/160 (42%), Gaps = 5/160 (3%)
Frame = +2
Query: 206 EQINYLENEF--KKSHYISAVQRKEIANIVNVPEKVIKIWFQNRRMREKKELCLIDNYEE 379
E+++ LE++ K ++ K+ A+I + K+ ++ QNRR++ +K L E
Sbjct: 338 ERVSSLESQLSNKPANQPLGANEKDAAHITELETKLKELHEQNRRLQRQKSLA---TQEI 394
Query: 380 DESSQMIPFVQDPSSYASTSTQDASVSLPLMSNTVETIPQPGTSKQIDDLNKSYDKDNEE 559
D + + D + S D L + V+ + + + ++ D+ ++E
Sbjct: 395 DLLRENLKSYDDEEAILSEKNTDMK-KLERIEGLVKLVDEYKLKLESMPVSLDVDETSDE 453
Query: 560 QFLITNEGSTLFP---YYIDLSKKNEHIKQNYPEKANMKA 670
L Y +L +KN+H+ EK N++A
Sbjct: 454 VSLQKRRRKNEHKDAGYVTELYRKNQHLLFQVKEKTNIEA 493
>SPBC887.02 |||ClC chloride channel|Schizosaccharomyces pombe|chr
2|||Manual
Length = 667
Score = 31.1 bits (67), Expect = 0.23
Identities = 24/119 (20%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
Frame = +2
Query: 437 STQDASVSLPL---MSNTVETIPQPGTSKQIDDLNKSYDKDNEEQFLITNEGSTLFPYYI 607
S+ S+PL + + + + P S I++L ++ ++ F++ + F +I
Sbjct: 512 SSNSLKFSIPLNFPVRSPEQLVRLPIRSCSIEELERAMHDSSQSFFVVLKNDTEFFEGFI 571
Query: 608 DLSKKNEHIKQNYPEKANMKATGNTTKSINHDRENPLDLSLKNSVVXNQGDITATADSP 784
+K +E + + P +NM+ T NT P+D + + T D+P
Sbjct: 572 SRNKVSELLNRR-PMSSNMQTTDNTGLDPLRSASAPVDSTFDLFDYIHPTTFTLNYDTP 629
>SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 659
Score = 29.9 bits (64), Expect = 0.52
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Frame = +2
Query: 416 PSSYASTS-----TQDASVSLPLMSNTVETIPQPGTSKQIDDLNKSYDKDNEEQFLITNE 580
PS + ST+ T +A VS + +E +P G K++DDL + E+ L
Sbjct: 413 PSQWMSTAKDIALTLEAIVSSLREKSLLEELPDLG--KKVDDLCSFTNSLMEQVRLAVIN 470
Query: 581 GSTLFPYYIDLSKKNEHIK-QNYPEKANMKATGNTTKSINHDRENPLD 721
G+ L Y++D S + I + + + TG ++ S+ + +P+D
Sbjct: 471 GALLPIYHVDASACSISISLMDIAKTYGLTNTGKSSLSVGRNSLHPVD 518
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 29.5 bits (63), Expect = 0.69
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = -3
Query: 506 YQVVE*FPQYYSLMAMKRTRPVLMYWRSSMDLEQM 402
Y +++ P+Y +L+ + P+ ++W + +DLE M
Sbjct: 435 YPIIKDDPRYLNLLGQSGSTPLDLFWDTIVDLENM 469
>SPAC637.10c |rpn10|pus1|19S proteasome regulatory subunit
Rpn10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 243
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 167 AKKSKRIRSAFTTEQINYLENEFKKSHYISAVQRKEIANIVNVP 298
AK+ K+ A I L+NE H+I A + ++V++P
Sbjct: 129 AKRMKKNNVAIDIIHIGELQNESALQHFIDAANSSDSCHLVSIP 172
>SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual
Length = 415
Score = 27.9 bits (59), Expect = 2.1
Identities = 21/78 (26%), Positives = 32/78 (41%)
Frame = +2
Query: 368 NYEEDESSQMIPFVQDPSSYASTSTQDASVSLPLMSNTVETIPQPGTSKQIDDLNKSYDK 547
N E + + +P V+ P S Q + +L L V+ IP +DD +S K
Sbjct: 280 NNERELTKHKLPIVK-PKLAVFPSNQATASTLQLAPPPVQAIPTLRNPVNLDDKKESLLK 338
Query: 548 DNEEQFLITNEGSTLFPY 601
IT +G +F Y
Sbjct: 339 YYATHPTITPDGFPIFAY 356
>SPAC12G12.08 |mrpl6||mitochondrial ribosomal protein subunit
L16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 213
Score = 27.5 bits (58), Expect = 2.8
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +2
Query: 503 GTSKQIDDLNKSYDKDNEEQFLITNEGSTL---FPYYIDLSKKNEHIKQNYPEKANMKAT 673
G + I N +D + E Q IT TL FP Y++LSK N+ +K +AT
Sbjct: 35 GKKEIIVPKNIQFDLEGE-QLQITGPHGTLNMRFPNYLNLSKTNDILKVGMDANIEKQAT 93
>SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regulator
protein Rif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1400
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 605 IDLS-KKNEHIKQNYPEKANMKATGNTTKSINHD--RENPLDLSLKNSVVXNQG 757
ID++ N +K+N ++N KA N T S+N+ N + S +NS + +G
Sbjct: 1173 IDVADNSNALLKENISSQSNRKADNNGTPSVNNSFTTANNDECSKENSQIEPEG 1226
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 26.6 bits (56), Expect = 4.8
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +2
Query: 347 KELCLIDNYEEDESSQMIPFVQDPSS--YASTSTQDASVSLPLMSNT-VETIPQPGTS 511
KE+ N E D S+ PF +D SS YA + D+ L N + P P S
Sbjct: 97 KEIESSKNQETDAKSEQAPFTEDASSSNYAHHRSADSQTKSALPPNVPASSSPLPPMS 154
>SPBC215.10 |||haloacid dehalogenase-like
hydrolase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 26.6 bits (56), Expect = 4.8
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Frame = +2
Query: 509 SKQIDDLNKS--YDKDNEEQFLITNEGSTLF-----PYYIDLSKKNEHIKQNYPEKANMK 667
SK+ID K K + Q +I + TL P+ +L + +++++NYP+ +
Sbjct: 3 SKEIDINQKKNVLPKPEDIQLIICDVDGTLLGPDHKPHPRNL-RALKYLRENYPQLPFVL 61
Query: 668 ATGNTTKSINHDRENPLDL------SLKNSVVXNQGDITATA 775
ATG S+ + RE L L L VV ++G+I A A
Sbjct: 62 ATGRQRTSVGNIRE-ALGLHVFPCVHLNGCVVYDKGEIVACA 102
>SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 438
Score = 26.6 bits (56), Expect = 4.8
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 185 IRSAFTTEQINYLENEFKKSHY 250
+ + F+TEQI LENE+ +Y
Sbjct: 7 LHNTFSTEQIEVLENEYAAHNY 28
>SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 612
Score = 26.6 bits (56), Expect = 4.8
Identities = 16/81 (19%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +2
Query: 122 ISI*TMQRFQQLSFPA-KKSKRIRSAFTTEQINYLENEFKKSHYISAVQRKEIANIVNVP 298
IS+ + F L PA +K A + NY++ ++ Y++ +Q N++ P
Sbjct: 93 ISVKDLDEFHLLDKPAANNTKADAEACLLKSKNYIKKSLQEIVYLTNMQPNVSWNVLQEP 152
Query: 299 EKVIKIWFQNRRMREKKELCL 361
+ IK+ ++ ++ + +
Sbjct: 153 TRGIKVPKESNNTQQNNQFVM 173
>SPAC14C4.09 |agn1||glucan endo-1,3-alpha-glucosidase
Agn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 424
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2
Query: 771 VAVISPWFXTTLFFSDKSSGFSRSWLI 691
VA +SPWF T L S K+ + WLI
Sbjct: 213 VAPVSPWFYTHL--SYKNWAYKSDWLI 237
>SPAC3A12.03c |mug145||ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 26.2 bits (55), Expect = 6.4
Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 3/108 (2%)
Frame = +2
Query: 257 AVQRKEIANIVNVPEKVIKIWFQNRRMREKKELCLIDNYEEDESSQMIPFVQDPS---SY 427
+V KE + +++ IK W + R+ K E +DN E++S + + PS +Y
Sbjct: 101 SVVSKEALSCISLEIPYIK-WLKKRKGHAKGESTFLDNRSENQSVIVQGQGETPSVIITY 159
Query: 428 ASTSTQDASVSLPLMSNTVETIPQPGTSKQIDDLNKSYDKDNEEQFLI 571
S S MS+ + I S D + S ++EE F I
Sbjct: 160 DVRRPNLGSTSFVEMSSALSNIYNTDASDG-DSSDDSCLLEDEEDFCI 206
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 26.2 bits (55), Expect = 6.4
Identities = 15/77 (19%), Positives = 34/77 (44%)
Frame = +2
Query: 329 RRMREKKELCLIDNYEEDESSQMIPFVQDPSSYASTSTQDASVSLPLMSNTVETIPQPGT 508
R + ++ + + E+ +++PS S + DAS+ + ++ I +
Sbjct: 58 RETQRNRKFSSLQKHLNTETPSFSVSIENPSK-PSAAFNDASLGKKSTEHQIDGIRNGSS 116
Query: 509 SKQIDDLNKSYDKDNEE 559
+ Q++ +K D DN E
Sbjct: 117 NLQMEGNDKELDTDNNE 133
>SPAC16E8.11c |tfb1||transcription factor TFIIH complex subunit
Tfb1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 477
Score = 26.2 bits (55), Expect = 6.4
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +2
Query: 521 DDLNKSYDKDNEEQFLITNEGSTLFPYYIDLSKKNEHIKQNYPEKANMKATGNT---TKS 691
DD+ Y KDNEE +++E + ++ + +N ++ M+ K+
Sbjct: 198 DDIMDKYLKDNEEVTKVSDEPIASHLFDLEGNDQNANVIAELRPDITMRIDKEALPFMKN 257
Query: 692 INHDRENPLDLSLKNS 739
IN E L+ SL NS
Sbjct: 258 INQLSERLLEKSLGNS 273
>SPAC1565.02c |||GTPase activating protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 374
Score = 25.8 bits (54), Expect = 8.5
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +2
Query: 539 YDKDNEEQFLITNEGSTLFPYYIDLSKKNEHIKQNYPEKANMKATGNTTKSINHDRE--N 712
YD DN++ ++ + LF Y D++ E N+ K K T HD +
Sbjct: 14 YDNDNDKVIVVVTKNLELFKKYDDINLIKE--AYNHVHKLIQKDERYTAVFFAHDSTVFS 71
Query: 713 PLDLSLK 733
L LSLK
Sbjct: 72 YLGLSLK 78
>SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 649
Score = 25.8 bits (54), Expect = 8.5
Identities = 38/188 (20%), Positives = 79/188 (42%), Gaps = 4/188 (2%)
Frame = +2
Query: 161 FPAKKSKRIRSAFTTEQINYLEN-EFKKSHYISAVQRKEIANIVNVPEKVIKIWFQNRRM 337
FP K + T YL + +F+++ +++ + N P + I + +
Sbjct: 248 FPVPNIKHAPISLTASLEEYLNDPDFEEN------RKQYLQNKSGSPVEETAILNRKPTL 301
Query: 338 REKKELCLIDNYEEDESSQMIPFVQDPSSYASTSTQDASVSLPLMSNTVETIPQPGTSKQ 517
R+KK + +++ESS I AS+S ++A SLP T I +
Sbjct: 302 RKKKSI----PKKQNESSSTIQKENTVQQEASSSEEEAVKSLPETQRTTSRIETQEEEIK 357
Query: 518 IDDLNKSYDKDNEE--QFLITNE-GSTLFPYYIDLSKKNEHIKQNYPEKANMKATGNTTK 688
+++ +++ EE + NE + + L + + + E+ N+ A G T+
Sbjct: 358 EEEMEGEEEEEEEEVPNYESENELEDKVGDLSLSLGVASSFVDEMLRERNNLSAEG-TSA 416
Query: 689 SINHDREN 712
S + D+++
Sbjct: 417 SPSLDKKS 424
>SPBP8B7.20c |||RNA methyltransferase Nop2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 608
Score = 25.8 bits (54), Expect = 8.5
Identities = 19/75 (25%), Positives = 31/75 (41%)
Frame = +2
Query: 224 ENEFKKSHYISAVQRKEIANIVNVPEKVIKIWFQNRRMREKKELCLIDNYEEDESSQMIP 403
EN K+ H Q + EK K F+N +K+L D +EE E+ +
Sbjct: 27 ENAKKRKHSKEKPQNSRKRQLAE--EK--KSLFENSDSENEKDLIDADEFEEAETLSDLE 82
Query: 404 FVQDPSSYASTSTQD 448
++P ++A D
Sbjct: 83 HDEEPQTFADEFIDD 97
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,400,835
Number of Sequences: 5004
Number of extensions: 68098
Number of successful extensions: 227
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 226
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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