Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_G15
         (938 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039...    33   0.33 
12_02_1194 - 26903802-26904127,26904209-26905091,26905131-269054...    32   0.76 
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430...    31   1.0  
05_07_0354 - 29507068-29507170,29507406-29507431,29508264-295083...    30   2.3  
06_01_0246 - 1856617-1856658,1856756-1856797,1856908-1857035,185...    29   7.1  
01_06_0192 + 27347369-27348826,27349124-27349264,27349350-273510...    29   7.1  
12_02_0888 + 24027358-24027565,24027858-24027868                       28   9.3  
02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,329...    28   9.3  

>02_05_0484 -
           29401195-29401404,29401572-29401755,29401866-29403973,
           29404320-29404403,29404507-29404777,29404864-29405117,
           29405513-29405722,29406357-29406503
          Length = 1155

 Score = 33.1 bits (72), Expect = 0.33
 Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
 Frame = +3

Query: 387 LTETRKKISEADAD-SPNLNSLXKMLAELENDEKKILKRDEELRKKDKHTPWNVDTISEP 563
           L E++KK+ E   D     N+L K    L+NDEK++   +++L+ +++     +  +   
Sbjct: 386 LNESKKKLEEWQNDLDTKSNALKKWEESLQNDEKQL--SEQKLQIENERKQAEMYKLELE 443

Query: 564 GFNKTVI--NTKALRPSNE-NLTEEEKE------AKMKKFIKE 665
               TV+    K L+  N   LTEEE++      A++KK I E
Sbjct: 444 SLKATVVAEKEKILQEQNNLKLTEEERQEHIMLTAQLKKEIDE 486



 Score = 29.5 bits (63), Expect = 4.0
 Identities = 20/71 (28%), Positives = 35/71 (49%)
 Frame = +3

Query: 462 AELENDEKKILKRDEELRKKDKHTPWNVDTISEPGFNKTVINTKALRPSNENLTEEEKEA 641
           A+L   EK +   +E+L KK++    +   + E   N     + AL+   E+L  +EK+ 
Sbjct: 363 ADLVQREKDVRSSEEKLSKKEQVLNESKKKLEE-WQNDLDTKSNALKKWEESLQNDEKQL 421

Query: 642 KMKKFIKENEK 674
             +K   ENE+
Sbjct: 422 SEQKLQIENER 432


>12_02_1194 -
           26903802-26904127,26904209-26905091,26905131-26905427,
           26905638-26905709
          Length = 525

 Score = 31.9 bits (69), Expect = 0.76
 Identities = 23/94 (24%), Positives = 46/94 (48%)
 Frame = +3

Query: 393 ETRKKISEADADSPNLNSLXKMLAELENDEKKILKRDEELRKKDKHTPWNVDTISEPGFN 572
           E  KK  E  AD    +        +END ++++  ++E R +   +  N+++     F 
Sbjct: 314 EKTKKTQEGMADKSGTSQ------RVENDSEEVIYDEDEPRVQLVGSEENMESQESSDFA 367

Query: 573 KTVINTKALRPSNENLTEEEKEAKMKKFIKENEK 674
             V     L  +NE++TEE+++  ++   KE++K
Sbjct: 368 AAV--RVVLSQTNEHMTEEKRKKSLRLLEKEDKK 399


>01_05_0487 +
           22641133-22642182,22642276-22642863,22642961-22643068,
           22643582-22643692,22643784-22643849,22644858-22644917,
           22644990-22645119,22645159-22645547,22645783-22645902,
           22645957-22646022,22646190-22646255
          Length = 917

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 17/45 (37%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
 Frame = +3

Query: 393 ETRKKISEADADSP--NLNSLXKMLAELENDEKKILKRDEELRKK 521
           +T  K++EADA  P  ++  + ++LA+ +  E+ + KR+EELRK+
Sbjct: 156 KTTSKVAEADAKKPPRHVRVMLEVLAKRKEAEE-LRKREEELRKR 199


>05_07_0354 -
           29507068-29507170,29507406-29507431,29508264-29508301,
           29508722-29508825,29509005-29509024,29509251-29509299,
           29510319-29510406,29510463-29510562,29510660-29510737,
           29512688-29512804,29513718-29513821,29514497-29514569,
           29514904-29514981,29515091-29515215,29515278-29515341,
           29515439-29515597,29515950-29516048,29516496-29516624,
           29517010-29517075,29517160-29517304,29517379-29517500,
           29517683-29517838,29517918-29518029,29518891-29519036,
           29519148-29519252,29519391-29519540,29519703-29519776,
           29519902-29520055,29520142-29520408
          Length = 1016

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
 Frame = +3

Query: 438 LNSLXKMLAELENDEKKILKRDEELRKKD---KHTPW 539
           LN+L  + AELE D +++ +RD  L+K +   K  PW
Sbjct: 224 LNNLKALNAELEKDVERVRQRDRLLKKAELMKKKLPW 260


>06_01_0246 -
           1856617-1856658,1856756-1856797,1856908-1857035,
           1857311-1857518,1857617-1857797,1858227-1858271,
           1858565-1858918,1860282-1860325
          Length = 347

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
 Frame = +3

Query: 396 TRKKISEADAD---SPNLNSLXKMLAELENDEKKILK 497
           TRKK S+A+A    + N+N L K++ ++ ND+  +L+
Sbjct: 172 TRKKCSKAEAFQNVNNNMNQLAKVILDMYNDDHNLLE 208


>01_06_0192 + 27347369-27348826,27349124-27349264,27349350-27351081,
            27353739-27354606,27354784-27355957
          Length = 1790

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +2

Query: 278  YPIIVSMAAPGPCGTHGRATPRERGTGAKKERKPTTSNRDQEKN 409
            YP+  +M     CG   R  P + GT + ++  PT++  D+E N
Sbjct: 1190 YPL--NMDKHPSCGVSSREHPTQLGTCSAQQEPPTSNVEDKEDN 1231


>12_02_0888 + 24027358-24027565,24027858-24027868
          Length = 72

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2

Query: 296 MAAPGPCGTHGRATPRERGTG 358
           + APG CG  GRA  R R  G
Sbjct: 16  LGAPGACGAAGRAVGRRRAAG 36


>02_01_0459 +
           3298780-3298788,3298900-3299037,3299174-3299207,
           3299528-3299531,3299814-3299949,3300034-3300090,
           3301689-3301786,3301876-3301947,3302056-3302228,
           3302552-3302698,3303113-3303336,3305300-3305306,
           3305634-3305800,3306033-3306068,3306787-3307004,
           3307115-3307172,3307761-3307842,3308045-3308207,
           3308594-3308598,3308700-3308885,3308969-3309548,
           3309642-3309774,3309880-3309948,3310184-3310395,
           3310654-3310891,3311228-3311386,3311501-3311926,
           3312010-3312447,3312593-3312712,3312784-3313266,
           3313471-3314009,3314178-3314667,3314836-3314904,
           3315735-3315839,3315940-3316158,3316254-3316508,
           3316602-3316651,3317175-3317284,3317372-3317454,
           3317560-3317772,3317870-3318040
          Length = 2391

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
 Frame = +3

Query: 390 TETRKKISEADADSPNLNSLXKMLAELENDEKKI--LKRDEELRKKDKHTPWNV---DTI 554
           T + + +S +D +            E E+ EK++  ++ D E  + DK T   V   + I
Sbjct: 75  TNSSRSLSLSDNNDEKKKDKFSSGDEKEDHEKQLKQIRLDMEALRDDK-TQMEVILDEKI 133

Query: 555 SEPGFNKTVINTKALRPSNENLTEEEKEAKMKKFIKENEKFLK 683
            E     + +N   ++   E        +KMKKFIK + +FLK
Sbjct: 134 DEVRKISSKVNDLEVQLRREKDECHRMTSKMKKFIKAHARFLK 176


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,103,510
Number of Sequences: 37544
Number of extensions: 464876
Number of successful extensions: 1367
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1366
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2694390200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)