Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_G15
(938 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000266-4|ABB51177.1| 403|Caenorhabditis elegans Hypothetical ... 119 3e-27
AF000266-5|AAC71172.1| 370|Caenorhabditis elegans Hypothetical ... 118 6e-27
U64833-5|AAK95860.1| 402|Caenorhabditis elegans Hypothetical pr... 35 0.073
Z73426-2|CAA97794.1| 119|Caenorhabditis elegans Hypothetical pr... 33 0.39
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 32 0.51
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 32 0.51
Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical pr... 32 0.51
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 32 0.51
U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z66564-8|CAM84731.1| 892|Caenorhabditis elegans Hypothetical pr... 31 1.6
AL032659-3|CAA21749.2| 892|Caenorhabditis elegans Hypothetical ... 31 1.6
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr... 30 2.7
AF068717-4|AAC17764.2| 357|Caenorhabditis elegans Serpentine re... 30 2.7
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein. 30 2.7
Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical pr... 29 3.6
U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical p... 29 3.6
U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical p... 29 3.6
AF098989-2|AAK18954.3| 346|Caenorhabditis elegans Hypothetical ... 29 3.6
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr... 29 6.3
U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical pr... 29 6.3
U00050-3|AAL02480.1| 556|Caenorhabditis elegans Hypothetical pr... 29 6.3
U00050-2|AAL02479.1| 582|Caenorhabditis elegans Hypothetical pr... 29 6.3
U00050-1|AAA50697.1| 583|Caenorhabditis elegans Hypothetical pr... 29 6.3
AF022976-9|AAC69088.2| 404|Caenorhabditis elegans Hypothetical ... 29 6.3
Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical pr... 28 8.4
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 28 8.4
U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 28 8.4
AF067950-2|AAG24155.2| 365|Caenorhabditis elegans Serpentine re... 28 8.4
>AF000266-4|ABB51177.1| 403|Caenorhabditis elegans Hypothetical
protein W08F4.8b protein.
Length = 403
Score = 119 bits (286), Expect = 3e-27
Identities = 61/168 (36%), Positives = 89/168 (52%)
Frame = +3
Query: 198 SQTMVDYSKWKDIEISDDEDETHPNIDTPSLFRWRHXXXXXXXXXXXXXXXXXXXXXXXX 377
S+ +DYSKWKDIE+SDDED+THPNIDTPSLFRWRH
Sbjct: 32 SKMPIDYSKWKDIEVSDDEDDTHPNIDTPSLFRWRHQARLERMAEKKMEQEKIDKEKGTT 91
Query: 378 XXXLTETRKKISEADADSPNLNSLXKMLAELENDEKKILKRDEELRKKDKHTPWNVDTIS 557
+ E KK+ A AD + + + K + E++ E+ K++ EL +K++ PWNVDTI
Sbjct: 92 SKKMEELEKKL--AAADVTDKSDIQKQIDEVKAQEEAWRKKEAELEEKERLEPWNVDTIG 149
Query: 558 EPGFNKTVINTKALRPSNENLTEEEKEAKMKKFIKENEKFLKQFGLLR 701
F+ + IN + T+EE M F + +E L++ +L+
Sbjct: 150 HEAFSTSRINKITEKKPQAPKTDEEDTHAMSTFFETHESLLEKMAVLK 197
>AF000266-5|AAC71172.1| 370|Caenorhabditis elegans Hypothetical
protein W08F4.8a protein.
Length = 370
Score = 118 bits (284), Expect = 6e-27
Identities = 60/164 (36%), Positives = 87/164 (53%)
Frame = +3
Query: 210 VDYSKWKDIEISDDEDETHPNIDTPSLFRWRHXXXXXXXXXXXXXXXXXXXXXXXXXXXL 389
+DYSKWKDIE+SDDED+THPNIDTPSLFRWRH +
Sbjct: 3 IDYSKWKDIEVSDDEDDTHPNIDTPSLFRWRHQARLERMAEKKMEQEKIDKEKGTTSKKM 62
Query: 390 TETRKKISEADADSPNLNSLXKMLAELENDEKKILKRDEELRKKDKHTPWNVDTISEPGF 569
E KK+ A AD + + + K + E++ E+ K++ EL +K++ PWNVDTI F
Sbjct: 63 EELEKKL--AAADVTDKSDIQKQIDEVKAQEEAWRKKEAELEEKERLEPWNVDTIGHEAF 120
Query: 570 NKTVINTKALRPSNENLTEEEKEAKMKKFIKENEKFLKQFGLLR 701
+ + IN + T+EE M F + +E L++ +L+
Sbjct: 121 STSRINKITEKKPQAPKTDEEDTHAMSTFFETHESLLEKMAVLK 164
>U64833-5|AAK95860.1| 402|Caenorhabditis elegans Hypothetical
protein B0507.10 protein.
Length = 402
Score = 35.1 bits (77), Expect = 0.073
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 5/104 (4%)
Frame = +3
Query: 387 LTETRKKISEADADSPNLNSLXKMLAELENDEKK--ILKRDEELRKKDKHTPWNVDTISE 560
L + K+I E +A LN++ + + ND K + KR EL K K + I
Sbjct: 61 LNQRAKQIEEMEALQERLNAITREKLNVRNDSNKMEVEKRKFELEKLQKELEEKLQ-IRR 119
Query: 561 PGFNKT---VINTKALRPSNENLTEEEKEAKMKKFIKENEKFLK 683
N + + N + +R N EE+ A+ KKF NE+ LK
Sbjct: 120 QQLNDSAEIIKNGEKIRQEMCNKIREERNAEQKKF---NEEVLK 160
>Z73426-2|CAA97794.1| 119|Caenorhabditis elegans Hypothetical
protein F40F11.3 protein.
Length = 119
Score = 32.7 bits (71), Expect = 0.39
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 570 NKTVINTKALRPSNENLTEEEKEAKMKKFIKENEK 674
N+ ++ + S+ NLT+EE + KMK F+ EN K
Sbjct: 47 NEMLVKVDEIIASSANLTQEEIQRKMKDFMNENAK 81
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 32.3 bits (70), Expect = 0.51
Identities = 23/104 (22%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Frame = +3
Query: 387 LTETRKKISEADADSPNLNSLXKMLAELENDEKKILKRDEELRKKDK---HTPWNVDTIS 557
++E KK+ +A+A + K E E+ E+K+ + ++E+++K + ++
Sbjct: 542 ISELEKKLRDAEASRTDKEQKWKQ--EKESFERKLAEAEDEIKRKGERFVEMEKEMEEER 599
Query: 558 EPGFNKTVINTKALRPSNENLTEEEKEAK-MKKFIKENEKFLKQ 686
+ ++T+ AL S +NL +KE++ +K ++E + L++
Sbjct: 600 QKATDRTLKLKDALVNSEKNLETIKKESEDREKIVREKDAHLEE 643
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 32.3 bits (70), Expect = 0.51
Identities = 23/104 (22%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Frame = +3
Query: 387 LTETRKKISEADADSPNLNSLXKMLAELENDEKKILKRDEELRKKDK---HTPWNVDTIS 557
++E KK+ +A+A + K E E+ E+K+ + ++E+++K + ++
Sbjct: 544 ISELEKKLRDAEASRTDKEQKWKQ--EKESFERKLAEAEDEIKRKGERFVEMEKEMEEER 601
Query: 558 EPGFNKTVINTKALRPSNENLTEEEKEAK-MKKFIKENEKFLKQ 686
+ ++T+ AL S +NL +KE++ +K ++E + L++
Sbjct: 602 QKATDRTLKLKDALVNSEKNLETIKKESEDREKIVREKDAHLEE 645
>Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical
protein T12G3.1 protein.
Length = 693
Score = 32.3 bits (70), Expect = 0.51
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +3
Query: 390 TETRKKISEADADSPNLNSLXKMLAELENDEKKILKRDEELRKK 521
TET KK S+AD +S + +SL + +EN+++ LK E+L+K+
Sbjct: 106 TETAKKASDADRESKSRSSLKR----IENNQELTLKTLEKLQKE 145
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 32.3 bits (70), Expect = 0.51
Identities = 23/104 (22%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Frame = +3
Query: 387 LTETRKKISEADADSPNLNSLXKMLAELENDEKKILKRDEELRKKDK---HTPWNVDTIS 557
++E KK+ +A+A + K E E+ E+K+ + ++E+++K + ++
Sbjct: 544 ISELEKKLRDAEASRTDKEQKWKQ--EKESFERKLAEAEDEIKRKGERFVEMEKEMEEER 601
Query: 558 EPGFNKTVINTKALRPSNENLTEEEKEAK-MKKFIKENEKFLKQ 686
+ ++T+ AL S +NL +KE++ +K ++E + L++
Sbjct: 602 QKATDRTLKLKDALVNSEKNLETIKKESEDREKIVREKDAHLEE 645
>U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical
protein F55F8.7 protein.
Length = 518
Score = 31.1 bits (67), Expect = 1.2
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Frame = +3
Query: 393 ETRKKISEADADSPNLNSLXKMLAEL-ENDEKKILKRDEELRKKDKHTPWNV----DTIS 557
+ R + +E D N NS K A E +K L EE++K+ K + ++ T+S
Sbjct: 46 DKRPQTAELVKDEKNSNSEEKKTASANEVPAQKKLNSKEEVKKEKKKSEDDLLDVKKTVS 105
Query: 558 EPGFNKTVINTKALRPSNENLTEEEKEAKMKKFIKENE 671
+ K V + ++ +EEK+ K KK KE +
Sbjct: 106 KEDDKKKVDKKDGSKKLSKKKLKEEKKEKSKKVNKEKK 143
>Z66564-8|CAM84731.1| 892|Caenorhabditis elegans Hypothetical
protein Y71H9A.1 protein.
Length = 892
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 301 GTRPVWNAWKSDAARKRNWSKERKKTNDV*PRPGKKFRKLMP 426
G R +W AWK + ++ + K DV + + F K++P
Sbjct: 603 GAREMWRAWKKRRGKLKDGLERAKGARDVANKASENFVKMLP 644
>AL032659-3|CAA21749.2| 892|Caenorhabditis elegans Hypothetical
protein Y71H9A.1 protein.
Length = 892
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 301 GTRPVWNAWKSDAARKRNWSKERKKTNDV*PRPGKKFRKLMP 426
G R +W AWK + ++ + K DV + + F K++P
Sbjct: 603 GAREMWRAWKKRRGKLKDGLERAKGARDVANKASENFVKMLP 644
>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/62 (22%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 99 FLASFLEPINFFLNLLVKFKIFEYYQSE*PNQVSQTMVDYS--KWKDIEISDDEDETHPN 272
F+ ++PI + L + K+FE+++ E Q ++++S ++ + +D PN
Sbjct: 225 FIFPNMDPITLEIGLFLDSKLFEHFEREYIQDAEQHLLEFSLALINNVHVLYQQDTLTPN 284
Query: 273 ID 278
+D
Sbjct: 285 LD 286
>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/62 (22%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 99 FLASFLEPINFFLNLLVKFKIFEYYQSE*PNQVSQTMVDYS--KWKDIEISDDEDETHPN 272
F+ ++PI + L + K+FE+++ E Q ++++S ++ + +D PN
Sbjct: 225 FIFPNMDPITLEIGLFLDSKLFEHFEREYIQDAEQHLLEFSLALINNVHVLYQQDTLTPN 284
Query: 273 ID 278
+D
Sbjct: 285 LD 286
>AF068717-4|AAC17764.2| 357|Caenorhabditis elegans Serpentine
receptor, class w protein144 protein.
Length = 357
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 223 NGKISKFPTMKTRPIQTLIPHHCFDGGTR-PVWNAWKSDAARKRNWSKERKKTND 384
+G+I K T+ + T+IP F T V WK++A RKR +S KK ND
Sbjct: 213 DGRILKISTLINAIVSTIIPCFIFPIVTVFLVKELWKAEANRKRLFSS--KKVND 265
>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
Length = 1461
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/62 (22%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 99 FLASFLEPINFFLNLLVKFKIFEYYQSE*PNQVSQTMVDYS--KWKDIEISDDEDETHPN 272
F+ ++PI + L + K+FE+++ E Q ++++S ++ + +D PN
Sbjct: 225 FIFPNMDPITLEIGLFLDSKLFEHFEREYIQDAEQHLLEFSLALINNVHVLYQQDTLTPN 284
Query: 273 ID 278
+D
Sbjct: 285 LD 286
>Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical
protein C11E4.6 protein.
Length = 1170
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +3
Query: 762 LPITLVIWCINLEMEEKHDLMXHGGPSDYLHAVHIGTVXPLDVDPXAC 905
LPI L W NLE+ + L P+D L+AV+I PL + C
Sbjct: 98 LPIHLAAWNGNLEIVKMLLLQTMEKPADILNAVNIFNETPLHLAVQRC 145
>U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical
protein F29B9.2b protein.
Length = 897
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 42 DFGGSGMSNNVLKGERIFXFLA 107
DFGGS + ++LKGE+IF A
Sbjct: 497 DFGGSSVYYHILKGEKIFYIAA 518
>U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical
protein F29B9.2a protein.
Length = 910
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 42 DFGGSGMSNNVLKGERIFXFLA 107
DFGGS + ++LKGE+IF A
Sbjct: 510 DFGGSSVYYHILKGEKIFYIAA 531
>AF098989-2|AAK18954.3| 346|Caenorhabditis elegans Hypothetical
protein F47G6.3 protein.
Length = 346
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 465 ELENDEKKILKRDEELRKKDKHTPWNVDTISEPGFNKTV-INTK 593
E ++ E K+ K+ EE++KK N T PG NK V +N K
Sbjct: 140 EQKSKESKVEKK-EEIKKKTVRRETNFITYKRPGINKNVEVNRK 182
>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical
protein W02B8.2 protein.
Length = 1256
Score = 28.7 bits (61), Expect = 6.3
Identities = 29/104 (27%), Positives = 47/104 (45%)
Frame = +3
Query: 387 LTETRKKISEADADSPNLNSLXKMLAELENDEKKILKRDEELRKKDKHTPWNVDTISEPG 566
L +K I E AD+ L + L E+ ++ K+L+ + +LRK ++ I E
Sbjct: 537 LRSAKKTIQEVKADNKKLQQI---LEEVRQNQSKVLEENVKLRKGMAEA---IEKIEE-- 588
Query: 567 FNKTVINTKALRPSNENLTEEEKEAKMKKFIKENEKFLKQFGLL 698
F + N + R + E L E KE + K E E K+ +L
Sbjct: 589 FKR---NWHSSREAGERLQLEAKENEEKVLKVEEELQEKRLEVL 629
>U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical
protein F59A6.5 protein.
Length = 1286
Score = 28.7 bits (61), Expect = 6.3
Identities = 23/96 (23%), Positives = 43/96 (44%)
Frame = +3
Query: 387 LTETRKKISEADADSPNLNSLXKMLAELENDEKKILKRDEELRKKDKHTPWNVDTISEPG 566
L +K I E AD+ + ML E+ ++KIL+ + LRK ++
Sbjct: 552 LRSAKKTIQEVKADNQKVQL---MLVEVRQHQEKILEENVRLRKGMADALAKIEEYKRSW 608
Query: 567 FNKTVINTKALRPSNENLTEEEKEAKMKKFIKENEK 674
N R E+ T+E+K K+++ ++E ++
Sbjct: 609 QNS---QETCERLERESATKEDKLDKLEEELQEKKQ 641
>U00050-3|AAL02480.1| 556|Caenorhabditis elegans Hypothetical
protein F09F7.5c protein.
Length = 556
Score = 28.7 bits (61), Expect = 6.3
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +3
Query: 435 NLNSLXKMLAEL-ENDEKKILKRDEELRKKDKHTPWNVDTISEPGFNKTVINTKALRPSN 611
N +++ +L+ + E+D+ ++LKRD E+ ++ V + +P KTV +T+ L+
Sbjct: 457 NADTVSSILSTVGEDDDVEVLKRDREVEEE------FVPPVPKPRSRKTV-STEPLKEEE 509
Query: 612 ENLTEEE 632
E EEE
Sbjct: 510 EENVEEE 516
>U00050-2|AAL02479.1| 582|Caenorhabditis elegans Hypothetical
protein F09F7.5b protein.
Length = 582
Score = 28.7 bits (61), Expect = 6.3
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +3
Query: 435 NLNSLXKMLAEL-ENDEKKILKRDEELRKKDKHTPWNVDTISEPGFNKTVINTKALRPSN 611
N +++ +L+ + E+D+ ++LKRD E+ ++ V + +P KTV +T+ L+
Sbjct: 456 NADTVSSILSTVGEDDDVEVLKRDREVEEE------FVPPVPKPRSRKTV-STEPLKEEE 508
Query: 612 ENLTEEE 632
E EEE
Sbjct: 509 EENVEEE 515
>U00050-1|AAA50697.1| 583|Caenorhabditis elegans Hypothetical
protein F09F7.5a protein.
Length = 583
Score = 28.7 bits (61), Expect = 6.3
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +3
Query: 435 NLNSLXKMLAEL-ENDEKKILKRDEELRKKDKHTPWNVDTISEPGFNKTVINTKALRPSN 611
N +++ +L+ + E+D+ ++LKRD E+ ++ V + +P KTV +T+ L+
Sbjct: 457 NADTVSSILSTVGEDDDVEVLKRDREVEEE------FVPPVPKPRSRKTV-STEPLKEEE 509
Query: 612 ENLTEEE 632
E EEE
Sbjct: 510 EENVEEE 516
>AF022976-9|AAC69088.2| 404|Caenorhabditis elegans Hypothetical
protein R11G11.14 protein.
Length = 404
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Frame = -3
Query: 495 SVFFFHHSQAQLASFX-MNLD*GC-RHQLPKFFSWSRL----DVVGFLSFFA 358
S+++ HSQ L F ++ D G ++ KFF+ + + D+ GFLSFFA
Sbjct: 161 SLYYMGHSQGTLTMFSHLSKDDGIFAKKIKKFFALAPVGSVKDIKGFLSFFA 212
>Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical
protein K07A12.2 protein.
Length = 961
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = +2
Query: 722 NFLLDHNQLVCEETAN-YLGHLV 787
N LLD NQL+C+E+ N +L +L+
Sbjct: 439 NILLDGNQLICDESFNEFLTYLI 461
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 28.3 bits (60), Expect = 8.4
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +3
Query: 393 ETRKKISEADADSPNLNSLXKMLAELENDEKKIL--KRDEELRKKDKHTPWNVDTISEPG 566
E +K + D D + + E + DEKK K+DEE +K DK + E
Sbjct: 89 EEKKDEEKKDGDKKEDDKKDEKKDEDKKDEKKDADEKKDEE-KKDDKKDEKKDEKKDEKK 147
Query: 567 FNKTVINTKALRPSNENLTEEEKEAKMKKFIKENEK 674
K + K+ + S +++ K K + KE++K
Sbjct: 148 DEKKEKSKKSKKSSKSKKSKKSKREKKDEEKKEDDK 183
>U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical
protein ZC449.5 protein.
Length = 493
Score = 28.3 bits (60), Expect = 8.4
Identities = 20/68 (29%), Positives = 28/68 (41%)
Frame = +3
Query: 390 TETRKKISEADADSPNLNSLXKMLAELENDEKKILKRDEELRKKDKHTPWNVDTISEPGF 569
TE KK + D K +E ++D+KK K D+ + D+ SE
Sbjct: 296 TEKPKKEDKKDKKDKKDKKQKKEDSEEDDDDKKSKSSSSSDSKTDEKSTSESDSSSEASS 355
Query: 570 NKTVINTK 593
KTV TK
Sbjct: 356 EKTVEGTK 363
>AF067950-2|AAG24155.2| 365|Caenorhabditis elegans Serpentine
receptor, class w protein143 protein.
Length = 365
Score = 28.3 bits (60), Expect = 8.4
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 223 NGKISKFPTMKTRPIQTLIPHHCFDGGTR-PVWNAWKSDAARKRNWSKERKKTND 384
+G I K T+ + T+IP F T V WK++A RKR +S KK ND
Sbjct: 213 DGMILKIYTLINSVVSTIIPCFIFPIVTVFLVKELWKAEANRKRLFSS--KKVND 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,088,589
Number of Sequences: 27780
Number of extensions: 420176
Number of successful extensions: 1582
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1573
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2423194158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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