Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_G14
(813 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.3
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.3
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 30 2.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.3
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.3
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical pr... 29 5.2
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 5.2
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 5.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 9.1
U58758-7|AAO38576.1| 220|Caenorhabditis elegans Hypothetical pr... 28 9.1
U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical pr... 28 9.1
U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical pr... 28 9.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 9.1
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Frame = +1
Query: 523 PPPPGGXXKKXGPPXFXXX-PPPKKXXGGEXXKXXFFFFXXXXXXPXXXXPPPPPP 687
PPPPG PP F PPP GG P PPPPPP
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGG-----------IPPPPPMFGAPPPPPP 119
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +1
Query: 523 PPPPGGXXKKXGPPXFXXXPPPKKXXGGEXXKXXFFFFXXXXXXPXXXXPPPPPP 687
PPPPGG PP PPP G P PPPPPP
Sbjct: 729 PPPPGGL-----PPITGGPPPPPPPGGLPPISGG----PPPPPPPPGGCPPPPPP 774
Score = 28.3 bits (60), Expect = 6.9
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = +1
Query: 505 GXXKKXPPPPGGXXKKXGPPXFXXXPPPKKXXGGEXXKXXFFFFXXXXXXPXXXXPPPPP 684
G PP GG G P PPP GG P PPPPP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGG--------------LPPITGGPPPPP 746
Query: 685 P 687
P
Sbjct: 747 P 747
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +1
Query: 523 PPPPGGXXKKXGPPXFXXXPPPKKXXGGEXXKXXFFFFXXXXXXPXXXXPPPPPP 687
PPPPGG PP PPP G P PPPPPP
Sbjct: 729 PPPPGGL-----PPITGGPPPPPPPGGLPPISGG----PPPPPPPPGGCPPPPPP 774
Score = 28.3 bits (60), Expect = 6.9
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = +1
Query: 505 GXXKKXPPPPGGXXKKXGPPXFXXXPPPKKXXGGEXXKXXFFFFXXXXXXPXXXXPPPPP 684
G PP GG G P PPP GG P PPPPP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGG--------------LPPITGGPPPPP 746
Query: 685 P 687
P
Sbjct: 747 P 747
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
Frame = -3
Query: 607 PPXXXFLGGGXXKKXGXPXFXXXPPGGGGXFXGXPPXXFXG-GXXXPXGGGXPXG 446
PP G G P PP GG G PP F G P G P G
Sbjct: 413 PPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGG 467
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +1
Query: 523 PPPPGGXXKKXGPPXFXXXPPPKKXXGGEXXKXXFFFFXXXXXXPXXXXPPPPPP 687
PPPPGG PP PPP G P PPPPPP
Sbjct: 312 PPPPGGL-----PPITGGPPPPPPPGGLPPISGG----PPPPPPPPGGCPPPPPP 357
Score = 28.3 bits (60), Expect = 6.9
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = +1
Query: 505 GXXKKXPPPPGGXXKKXGPPXFXXXPPPKKXXGGEXXKXXFFFFXXXXXXPXXXXPPPPP 684
G PP GG G P PPP GG P PPPPP
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGG--------------LPPITGGPPPPP 329
Query: 685 P 687
P
Sbjct: 330 P 330
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 523 PPPPGGXXKKXGPPXFXXXPPPK 591
PPPP G GPP PPP+
Sbjct: 1573 PPPPRGGSHCQGPPPLMGGPPPR 1595
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/55 (30%), Positives = 19/55 (34%)
Frame = -2
Query: 686 GGGGGGXXXXGXXXFXXKKKKXIXFXSPPXXFFGGGXXXKXGGPXFFXXPPGGGG 522
GGGGGG G + P G G GG + P GGGG
Sbjct: 157 GGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGG 211
Score = 27.9 bits (59), Expect = 9.1
Identities = 22/76 (28%), Positives = 24/76 (31%)
Frame = -3
Query: 685 GGGGXXXXGXGXXXXXXKKKXXFXFXPPXXXFLGGGXXKKXGXPXFXXXPPGGGGXFXGX 506
GGGG G G + P GGG G + P GGGG G
Sbjct: 159 GGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGG--YAVAPSGGGG-CGGG 215
Query: 505 PPXXFXGGXXXPXGGG 458
G P GGG
Sbjct: 216 GSSGGGGYASAPSGGG 231
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/55 (30%), Positives = 19/55 (34%)
Frame = -2
Query: 686 GGGGGGXXXXGXXXFXXKKKKXIXFXSPPXXFFGGGXXXKXGGPXFFXXPPGGGG 522
GGGGGG G + P G G GG + P GGGG
Sbjct: 157 GGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGG 211
Score = 27.9 bits (59), Expect = 9.1
Identities = 22/76 (28%), Positives = 24/76 (31%)
Frame = -3
Query: 685 GGGGXXXXGXGXXXXXXKKKXXFXFXPPXXXFLGGGXXKKXGXPXFXXXPPGGGGXFXGX 506
GGGG G G + P GGG G + P GGGG G
Sbjct: 159 GGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGG--YAVAPSGGGG-CGGG 215
Query: 505 PPXXFXGGXXXPXGGG 458
G P GGG
Sbjct: 216 GSSGGGGYASAPSGGG 231
>Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical
protein F54D5.8 protein.
Length = 331
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/55 (32%), Positives = 20/55 (36%)
Frame = -2
Query: 686 GGGGGGXXXXGXXXFXXKKKKXIXFXSPPXXFFGGGXXXKXGGPXFFXXPPGGGG 522
GG G G G + + F S FFGG GGP F G GG
Sbjct: 75 GGPGAGGGGGGGMHYEFRGDPMNIFSS----FFGGSDPFGAGGPGMFDLGGGAGG 125
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 28.7 bits (61), Expect = 5.2
Identities = 29/106 (27%), Positives = 30/106 (28%), Gaps = 1/106 (0%)
Frame = -3
Query: 760 GGPPPP-PXXXXXXXXXXXXXXXXXXGGGGXXXXGXGXXXXXXKKKXXFXFXPPXXXFLG 584
GGPPP P GG G + P L
Sbjct: 99 GGPPPGMPGGVPPQAQPFNPHGGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLM 158
Query: 583 GGXXKKXGXPXFXXXPPGGGGXFXGXPPXXFXGGXXXPXGGGXPXG 446
GG G P PPG GG G PP GG P G G G
Sbjct: 159 GGGGDPRGPPGGMGGPPGHGG--MGGPPG--HGGQGGPPGHGGMGG 200
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 28.7 bits (61), Expect = 5.2
Identities = 29/106 (27%), Positives = 30/106 (28%), Gaps = 1/106 (0%)
Frame = -3
Query: 760 GGPPPP-PXXXXXXXXXXXXXXXXXXGGGGXXXXGXGXXXXXXKKKXXFXFXPPXXXFLG 584
GGPPP P GG G + P L
Sbjct: 379 GGPPPGMPGGVPPQAQPFNPHGGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLM 438
Query: 583 GGXXKKXGXPXFXXXPPGGGGXFXGXPPXXFXGGXXXPXGGGXPXG 446
GG G P PPG GG G PP GG P G G G
Sbjct: 439 GGGGDPRGPPGGMGGPPGHGG--MGGPPG--HGGQGGPPGHGGMGG 480
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +1
Query: 523 PPPPGGXXKKXGPPXFXXXPPP 588
PPPP + GPP PPP
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPP 319
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = +1
Query: 523 PPPPGGXXKKXGPPXFXXXPPPKKXXGGEXXKXXFFFFXXXXXXPXXXXPPPPPP 687
PPPPG G P PPP + G PPPPPP
Sbjct: 301 PPPPGRTPGPPGMPGMPPPPPPSRF--GPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
>U58758-7|AAO38576.1| 220|Caenorhabditis elegans Hypothetical
protein ZK1127.9d protein.
Length = 220
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 548 FXXPPGGGGXFFXXPP 501
F PPGG G FF PP
Sbjct: 40 FNGPPGGAGSFFGVPP 55
>U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical
protein ZK1127.9a protein.
Length = 914
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 548 FXXPPGGGGXFFXXPP 501
F PPGG G FF PP
Sbjct: 49 FNGPPGGAGSFFGVPP 64
>U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical
protein ZK1127.9b protein.
Length = 905
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 548 FXXPPGGGGXFFXXPP 501
F PPGG G FF PP
Sbjct: 40 FNGPPGGAGSFFGVPP 55
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +1
Query: 523 PPPPGGXXKKXGPPXFXXXPPP 588
PPPP + GPP PPP
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPPP 329
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = +1
Query: 523 PPPPGGXXKKXGPPXFXXXPPPKKXXGGEXXKXXFFFFXXXXXXPXXXXPPPPPP 687
PPPPG G P PPP + G PPPPPP
Sbjct: 311 PPPPGRTPGPPGMPGMPPPPPPSRF--GPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,223,025
Number of Sequences: 27780
Number of extensions: 333881
Number of successful extensions: 1775
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1556
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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