Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_G05
(893 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1005 + 33723743-33723946,33724035-33724256,33724789-337249... 81 9e-16
01_03_0216 + 13870364-13870472,13871406-13871477,13871603-138716... 70 3e-12
05_04_0012 + 17145112-17145205,17145681-17145752,17145832-171459... 58 7e-09
02_02_0418 + 10000744-10000840,10000952-10001023,10001786-100018... 58 7e-09
05_01_0400 - 3159370-3159385,3159599-3159703,3159972-3160006,316... 54 2e-07
06_01_0080 + 644021-645463 30 2.2
05_06_0085 + 25441460-25443504,25444263-25444536,25445091-25445468 29 5.0
04_03_0515 + 16698589-16701066 29 5.0
01_05_0431 - 22084474-22084635,22084740-22084844,22084931-220850... 29 5.0
11_06_0703 + 26444128-26446215,26446525-26447226 29 6.6
03_01_0110 - 865605-866004,866094-866712,867659-867863 29 6.6
01_06_0663 - 30991390-30992340 29 6.6
05_01_0436 + 3466397-3466654,3467336-3467410,3468321-3469571 28 8.7
>01_06_1005 +
33723743-33723946,33724035-33724256,33724789-33724901,
33725581-33725950
Length = 302
Score = 81.4 bits (192), Expect = 9e-16
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 3/204 (1%)
Frame = +1
Query: 124 IGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLL-RGELK 300
+G++G+G +G A L A+ G V + D ++ A++ I L L G L + +
Sbjct: 13 VGVIGAGQMGSGIAQLAAAAGCGVLLLDSDTAALSRAVDSISSSLRRLVAKGQLSQASCE 72
Query: 301 AS-EQFQCIKGSTDLATAVKGAVFVQECVPENLDLKKKVFQNLDSVVDDNTIXXXXXXXX 477
S EQ +C+ +L + A V E + E+ D+KKK+F LD + + I
Sbjct: 73 HSIEQIKCVSSVQEL----RDADLVIEAIVESEDIKKKLFVELDKITKPSAILASNTSSI 128
Query: 478 XXXXXXEGLKHKSQVIVSHPVNPPYYVPLVEIVPAPWTKPEVAKKTXEIMEEIGQQPVSL 657
QVI H NPP + L+EI+ T EV K E +G + V
Sbjct: 129 SITRLASATNRPCQVIGMHFFNPPPIMKLIEIIRGADTSEEVFTKVKSFSERLG-KTVIC 187
Query: 658 TREIDGFVLNRIQYAILDEV-WRL 726
+++ GF++NRI +++E W L
Sbjct: 188 SQDYPGFIVNRILMPMINEAFWAL 211
>01_03_0216 +
13870364-13870472,13871406-13871477,13871603-13871668,
13871767-13871823,13871917-13871984,13872068-13872149,
13872445-13872500,13872645-13872947,13873042-13873128,
13873199-13873373,13873481-13873602,13873689-13873852,
13873925-13874179,13874312-13874433,13874542-13874663,
13875111-13875259,13875346-13875484,13875715-13875750
Length = 727
Score = 69.7 bits (163), Expect = 3e-12
Identities = 48/194 (24%), Positives = 87/194 (44%)
Frame = +1
Query: 112 KSEKIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRG 291
K K+ I+G GL+G A Y V + +V K + I+ IK L + G +
Sbjct: 313 KVTKVAILGGGLMGSGIATAMILSNYPVILKEVNEKFLNAGIDRIKANLQSRVRKGKMTE 372
Query: 292 ELKASEQFQCIKGSTDLATAVKGAVFVQECVPENLDLKKKVFQNLDSVVDDNTIXXXXXX 471
E + + + G D K V E V EN+ LK+++F +L+ + +
Sbjct: 373 E-RYEKAMSLVTGVLDYER-FKDVDLVIEAVIENVKLKQQIFSDLEKYCPSHCVLATNTS 430
Query: 472 XXXXXXXXEGLKHKSQVIVSHPVNPPYYVPLVEIVPAPWTKPEVAKKTXEIMEEIGQQPV 651
E + K +++ +H +P + +PL+EIV T P+V ++ ++I + P+
Sbjct: 431 TIDLNLIGEKTRSKDRIVGAHFFSPAHVMPLLEIVRTQHTSPQVVVDLLDVGKKIKKTPI 490
Query: 652 SLTREIDGFVLNRI 693
+ GF +NR+
Sbjct: 491 -VVGNCTGFAVNRM 503
>05_04_0012 +
17145112-17145205,17145681-17145752,17145832-17145911,
17146059-17146175,17146282-17146363,17147086-17147141,
17147258-17147560,17147658-17147744,17148118-17148292,
17148370-17148491,17149028-17149191,17149277-17149531,
17150419-17150540,17150656-17150777,17151302-17151450,
17151565-17151703,17151831-17151866
Length = 724
Score = 58.4 bits (135), Expect = 7e-09
Identities = 45/191 (23%), Positives = 82/191 (42%)
Frame = +1
Query: 121 KIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRGELK 300
K+ IVG GL+G A S V + +V + + I +K L +L G + E
Sbjct: 313 KVAIVGGGLMGSGIATALISNNLLVILKEVNEQFLDAGISRVKANLQSLVKRGQMTKE-D 371
Query: 301 ASEQFQCIKGSTDLATAVKGAVFVQECVPENLDLKKKVFQNLDSVVDDNTIXXXXXXXXX 480
+ + G D + V + E V E+L LK+K+F +L+ N I
Sbjct: 372 YENKLSLLSGVLDYEQFREADVVI-EAVIEDLSLKQKIFADLEKYCHSNCILATNTSTID 430
Query: 481 XXXXXEGLKHKSQVIVSHPVNPPYYVPLVEIVPAPWTKPEVAKKTXEIMEEIGQQPVSLT 660
+ + ++ +H +P + +PL+EI+ T +V + ++I + P+ +
Sbjct: 431 LHLIGQKTSCQDRIAGAHFFSPAHAMPLLEIIRTHRTSSQVVIDLLNVAKQIRKTPI-VV 489
Query: 661 REIDGFVLNRI 693
GF +NR+
Sbjct: 490 GNCTGFAVNRM 500
>02_02_0418 +
10000744-10000840,10000952-10001023,10001786-10001848,
10001952-10002008,10002159-10002226,10002327-10002408,
10002517-10002572,10002934-10003236,10003638-10003724,
10004454-10004628,10004813-10004934,10005171-10005334,
10006201-10006455,10006979-10007100,10007220-10007341,
10007452-10007600,10007649-10007652
Length = 665
Score = 58.4 bits (135), Expect = 7e-09
Identities = 47/193 (24%), Positives = 82/193 (42%)
Frame = +1
Query: 112 KSEKIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRG 291
K K+ ++G GL+G A V + +V + + + I L L G L
Sbjct: 308 KIRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNPQFLQRGQKMIAANLEGLVKRGSLTK 367
Query: 292 ELKASEQFQCIKGSTDLATAVKGAVFVQECVPENLDLKKKVFQNLDSVVDDNTIXXXXXX 471
+ K ++ +KG+ D + K V E V E + LK+ +F +L+ V + I
Sbjct: 368 D-KMNKAMSLLKGALDYSD-FKDVDMVIEAVIEKIPLKQSIFSDLEKVCPPHCILATNTS 425
Query: 472 XXXXXXXXEGLKHKSQVIVSHPVNPPYYVPLVEIVPAPWTKPEVAKKTXEIMEEIGQQPV 651
E + ++I +H +P + +PL+EIV T P+ + + I + PV
Sbjct: 426 TIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITVGKMIKKVPV 485
Query: 652 SLTREIDGFVLNR 690
+ GF +NR
Sbjct: 486 -VVGNCTGFAVNR 497
>05_01_0400 -
3159370-3159385,3159599-3159703,3159972-3160006,
3160134-3160272,3160457-3160605,3161052-3161173,
3161296-3161417,3161779-3162033,3162108-3162271,
3162311-3162489,3162593-3162767,3162916-3163002,
3163144-3163446,3163539-3163594,3163813-3163894,
3163972-3164039,3164779-3164835,3164926-3164991,
3165121-3165192,3167363-3167459
Length = 782
Score = 53.6 bits (123), Expect = 2e-07
Identities = 47/211 (22%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Frame = +1
Query: 112 KSEKIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRG 291
K K+ IVG GL+G A Y V + +V K + I+ IK L + +G +
Sbjct: 309 KVSKVAIVGGGLMGSGIATALMLSNYPVVLKEVNDKFLDAGIDRIKANLQSRVRNGKMTK 368
Query: 292 ELKAS-----------EQFQCIK---GSTDLATAVKGAVFVQE---CVPENLDLKKKVFQ 420
E+ E+F+ + ++ + F+++ V EN+ +K++VF
Sbjct: 369 EIYEKTLSLLTGVVDYERFKDVDLVIEESNTSNCYLAIYFIEQYWMAVVENVKVKQQVFA 428
Query: 421 NLDSVVDDNTIXXXXXXXXXXXXXXEGLKHKSQVIVSHPVNPPYYVPLVEIVPAPWTKPE 600
+L+ + + E + ++ +H +P + +PL+EIV + T P+
Sbjct: 429 DLERYCPSHCVLATNTSTIDLDLIGEKTNSQDRIAGAHFFSPAHVMPLLEIVRSNHTSPQ 488
Query: 601 VAKKTXEIMEEIGQQPVSLTREIDGFVLNRI 693
V ++ ++I + PV + GF +NR+
Sbjct: 489 VVVDLLDVGKKIKKTPV-VVGNCTGFAVNRM 518
>06_01_0080 + 644021-645463
Length = 480
Score = 30.3 bits (65), Expect = 2.2
Identities = 10/45 (22%), Positives = 27/45 (60%)
Frame = +1
Query: 121 KIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQ 255
+IG+ G ++G++ A+ A G+ ++VY+ ++ + ++ K +
Sbjct: 5 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVQRAKVE 49
>05_06_0085 + 25441460-25443504,25444263-25444536,25445091-25445468
Length = 898
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 496 EGLKHKSQVIVSHPVNPPYYVPLVEIVPAPWTKPEVAKKTXEIMEEIGQ 642
E L H V+ + PV+ +VE+ P TK +A+K M+E GQ
Sbjct: 745 EMLDHLESVLANEPVSVKSGQFIVEVKPQGVTKGLIAEKVLTSMKEKGQ 793
>04_03_0515 + 16698589-16701066
Length = 825
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 472 YLLNLIISCYRQLRCRDSGTPFF 404
Y N++I+CYR+ R D G P F
Sbjct: 190 YTYNILINCYRRARRPDLGLPVF 212
>01_05_0431 -
22084474-22084635,22084740-22084844,22084931-22085003,
22085109-22085179,22085429-22085548,22085631-22085715,
22085812-22085867,22085978-22086053,22086546-22086611,
22086843-22087060
Length = 343
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 52 SREVLSCGTVASTVIMASKFKSEKIGIVGSGLIGRSWAMLFASVGYQVTVYD 207
+R V SC +S+ F S K+G +G G++G A + G VTV++
Sbjct: 30 ARLVFSCSASSSSPSGEGGF-SGKVGFLGLGIMGAPMASNLINAGCDVTVWN 80
>11_06_0703 + 26444128-26446215,26446525-26447226
Length = 929
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 61 VLSCGTVASTVIMASKFKSEKIGIVGSGLIGRS 159
+L+C + VI + K K+GIVG+G +G++
Sbjct: 173 ILACRELVDLVIENKEKKDYKLGIVGTGGVGKT 205
>03_01_0110 - 865605-866004,866094-866712,867659-867863
Length = 407
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Frame = +1
Query: 535 PVNPPYYVPL---VEIVPAPWTKPE 600
PV PP Y+ L ++VP PW +PE
Sbjct: 317 PVKPPTYLRLNSKAQLVPNPWRQPE 341
>01_06_0663 - 30991390-30992340
Length = 316
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1
Query: 121 KIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQ 222
++ VG+G++G+S A + GY +TVY+ A +
Sbjct: 21 RVAWVGTGVMGQSMAGHLLAAGYALTVYNRTASK 54
>05_01_0436 + 3466397-3466654,3467336-3467410,3468321-3469571
Length = 527
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/63 (23%), Positives = 32/63 (50%)
Frame = +1
Query: 79 VASTVIMASKFKSEKIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDIKYQL 258
V+ST +A +K+ ++G+G IG ++ +G +VTV + + + +I+ Q
Sbjct: 222 VSSTGALALSEIPKKLVVIGAGYIGLEMGSVWNRLGSEVTVVEFASDIVPSMDGEIRKQF 281
Query: 259 HTL 267
+
Sbjct: 282 QRM 284
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,963,682
Number of Sequences: 37544
Number of extensions: 444761
Number of successful extensions: 1240
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1238
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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