Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_F24
         (903 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    26   1.4  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   3.1  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   4.2  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           24   5.5  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    24   5.5  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          24   7.3  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   7.3  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    24   7.3  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -1

Query: 561  KPFITLTYDEAQLILNTKGSGTGGDFNKEQELIL 460
            KPFI   +     IL+T  +GT G+ +K Q   L
Sbjct: 2299 KPFILQMFGSVSAILDTDENGTYGEAHKVQSSCL 2332


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 108 FTCHSYEAILGKE 146
           F+CHSYE  +G+E
Sbjct: 484 FSCHSYELFVGQE 496


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 146 SVSFILLTPQSTCSNLSKPKPNPP 217
           S S  +L     C  + +PKPNPP
Sbjct: 382 SFSSFMLQAFVVCVPVQRPKPNPP 405


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 811 IXRGMXNGXTLGPTFWSRKLQGL 743
           I  G+  G  LGPT W+    G+
Sbjct: 689 ITAGVPQGSILGPTLWNTMYDGV 711


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 811 IXRGMXNGXTLGPTFWSRKLQGL 743
           I  G+  G  LGPT W+    G+
Sbjct: 697 ISAGVPQGSILGPTLWNMMYDGV 719


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +1

Query: 391 FHIKRLHVFGPFCYKYRTSTVIYQN*FLFFIKIPSGPRPL 510
           F +K + V  P C  YR  TV   + +  FIKI  G R L
Sbjct: 244 FFLKAIRVESPPCLHYRAITV--NSEWRSFIKIFEGVRCL 281


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 811 IXRGMXNGXTLGPTFWSRKLQGL 743
           +  G+  G  LGPT W+    G+
Sbjct: 601 VTSGVPQGSVLGPTLWNLMYDGV 623


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 811 IXRGMXNGXTLGPTFWSRKLQGL 743
           +  G+  G  LGPT W+    G+
Sbjct: 622 VTAGVPQGSILGPTLWNTMYDGV 644


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 865,235
Number of Sequences: 2352
Number of extensions: 17873
Number of successful extensions: 40
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97574436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)