Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_F23
(882 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y08421-1|CAA69698.1| 627|Homo sapiens nicotinic acetylcholine r... 32 3.2
X89741-1|CAA61893.1| 627|Homo sapiens neuronal acetylcholine re... 32 3.2
X87629-1|CAA60959.1| 602|Homo sapiens nicotinic acetylcholine r... 32 3.2
U62433-1|AAB40111.1| 627|Homo sapiens nicotinic acetylcholine r... 32 3.2
L35901-1|AAA64743.1| 627|Homo sapiens nicotinic acetylcholine r... 32 3.2
DQ093071-1|AAY88737.1| 627|Homo sapiens cholinergic receptor, n... 32 3.2
BC096293-1|AAH96293.1| 451|Homo sapiens CHRNA4 protein protein. 32 3.2
BC096292-1|AAH96292.1| 451|Homo sapiens CHRNA4 protein protein. 32 3.2
BC096291-1|AAH96291.1| 556|Homo sapiens CHRNA4 protein protein. 32 3.2
BC096290-1|AAH96290.1| 627|Homo sapiens cholinergic receptor, n... 32 3.2
AB209359-1|BAD92596.1| 533|Homo sapiens cholinergic receptor, n... 32 3.2
CR533476-1|CAG38507.1| 208|Homo sapiens AWP1 protein. 31 4.2
BC073131-1|AAH73131.1| 213|Homo sapiens zinc finger, AN1-type d... 31 4.2
BC027707-1|AAH27707.1| 213|Homo sapiens ZFAND5 protein protein. 31 4.2
BC011018-1|AAH11018.1| 213|Homo sapiens zinc finger, AN1-type d... 31 4.2
BC005283-1|AAH05283.1| 208|Homo sapiens zinc finger, AN1-type d... 31 4.2
AL135924-4|CAD13440.1| 213|Homo sapiens zinc finger, AN1-type d... 31 4.2
AL135924-3|CAI16263.1| 211|Homo sapiens zinc finger, AN1-type d... 31 4.2
AJ251095-1|CAC14876.1| 208|Homo sapiens PRK1-associated protein... 31 4.2
AF261138-1|AAG44674.1| 208|Homo sapiens HT032 protein. 31 4.2
AF062347-1|AAC42602.1| 213|Homo sapiens zinc finger protein 216... 31 4.2
AF062346-1|AAC42601.1| 213|Homo sapiens zinc finger protein 216... 31 4.2
AF062072-1|AAC61801.1| 213|Homo sapiens zinc finger protein 216... 31 4.2
AF061739-1|AAD17528.1| 186|Homo sapiens unknown protein. 31 4.2
Y16281-1|CAA76154.1| 529|Homo sapiens nicotinic acetylcholine r... 31 5.5
U62431-1|AAB40109.1| 529|Homo sapiens nicotinic acetylcholine r... 31 5.5
>Y08421-1|CAA69698.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha4 subunit precursor protein.
Length = 627
Score = 31.9 bits (69), Expect = 3.2
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 397 SYTTNKENCCAQHXPDVTWAYI 462
+Y T K CCA+ PD+T+A++
Sbjct: 217 TYNTRKYECCAEIYPDITYAFV 238
>X89741-1|CAA61893.1| 627|Homo sapiens neuronal acetylcholine
receptor alpha-4 subunit protein.
Length = 627
Score = 31.9 bits (69), Expect = 3.2
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 397 SYTTNKENCCAQHXPDVTWAYI 462
+Y T K CCA+ PD+T+A++
Sbjct: 217 TYNTRKYECCAEIYPDITYAFV 238
>X87629-1|CAA60959.1| 602|Homo sapiens nicotinic acetylcholine
receptor protein.
Length = 602
Score = 31.9 bits (69), Expect = 3.2
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 397 SYTTNKENCCAQHXPDVTWAYI 462
+Y T K CCA+ PD+T+A++
Sbjct: 192 TYNTRKYECCAEIYPDITYAFV 213
>U62433-1|AAB40111.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha4 subunit precursor protein.
Length = 627
Score = 31.9 bits (69), Expect = 3.2
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 397 SYTTNKENCCAQHXPDVTWAYI 462
+Y T K CCA+ PD+T+A++
Sbjct: 217 TYNTRKYECCAEIYPDITYAFV 238
>L35901-1|AAA64743.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha 4 subunit protein.
Length = 627
Score = 31.9 bits (69), Expect = 3.2
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 397 SYTTNKENCCAQHXPDVTWAYI 462
+Y T K CCA+ PD+T+A++
Sbjct: 217 TYNTRKYECCAEIYPDITYAFV 238
>DQ093071-1|AAY88737.1| 627|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 4 protein.
Length = 627
Score = 31.9 bits (69), Expect = 3.2
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 397 SYTTNKENCCAQHXPDVTWAYI 462
+Y T K CCA+ PD+T+A++
Sbjct: 217 TYNTRKYECCAEIYPDITYAFV 238
>BC096293-1|AAH96293.1| 451|Homo sapiens CHRNA4 protein protein.
Length = 451
Score = 31.9 bits (69), Expect = 3.2
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 397 SYTTNKENCCAQHXPDVTWAYI 462
+Y T K CCA+ PD+T+A++
Sbjct: 41 TYNTRKYECCAEIYPDITYAFV 62
>BC096292-1|AAH96292.1| 451|Homo sapiens CHRNA4 protein protein.
Length = 451
Score = 31.9 bits (69), Expect = 3.2
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 397 SYTTNKENCCAQHXPDVTWAYI 462
+Y T K CCA+ PD+T+A++
Sbjct: 41 TYNTRKYECCAEIYPDITYAFV 62
>BC096291-1|AAH96291.1| 556|Homo sapiens CHRNA4 protein protein.
Length = 556
Score = 31.9 bits (69), Expect = 3.2
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 397 SYTTNKENCCAQHXPDVTWAYI 462
+Y T K CCA+ PD+T+A++
Sbjct: 146 TYNTRKYECCAEIYPDITYAFV 167
>BC096290-1|AAH96290.1| 627|Homo sapiens cholinergic receptor,
nicotinic, alpha 4 protein.
Length = 627
Score = 31.9 bits (69), Expect = 3.2
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 397 SYTTNKENCCAQHXPDVTWAYI 462
+Y T K CCA+ PD+T+A++
Sbjct: 217 TYNTRKYECCAEIYPDITYAFV 238
>AB209359-1|BAD92596.1| 533|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 4 precursor variant
protein.
Length = 533
Score = 31.9 bits (69), Expect = 3.2
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 397 SYTTNKENCCAQHXPDVTWAYI 462
+Y T K CCA+ PD+T+A++
Sbjct: 123 TYNTRKYECCAEIYPDITYAFV 144
>CR533476-1|CAG38507.1| 208|Homo sapiens AWP1 protein.
Length = 208
Score = 31.5 bits (68), Expect = 4.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +1
Query: 655 GFYGNPSTDGLCSV 696
GFYGNP T+G+CSV
Sbjct: 19 GFYGNPRTNGMCSV 32
>BC073131-1|AAH73131.1| 213|Homo sapiens zinc finger, AN1-type
domain 5 protein.
Length = 213
Score = 31.5 bits (68), Expect = 4.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +1
Query: 655 GFYGNPSTDGLCSV 696
GFYGNP T+G+CSV
Sbjct: 19 GFYGNPRTNGMCSV 32
>BC027707-1|AAH27707.1| 213|Homo sapiens ZFAND5 protein protein.
Length = 213
Score = 31.5 bits (68), Expect = 4.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +1
Query: 655 GFYGNPSTDGLCSV 696
GFYGNP T+G+CSV
Sbjct: 19 GFYGNPRTNGMCSV 32
>BC011018-1|AAH11018.1| 213|Homo sapiens zinc finger, AN1-type
domain 5 protein.
Length = 213
Score = 31.5 bits (68), Expect = 4.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +1
Query: 655 GFYGNPSTDGLCSV 696
GFYGNP T+G+CSV
Sbjct: 19 GFYGNPRTNGMCSV 32
>BC005283-1|AAH05283.1| 208|Homo sapiens zinc finger, AN1-type
domain 6 protein.
Length = 208
Score = 31.5 bits (68), Expect = 4.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +1
Query: 655 GFYGNPSTDGLCSV 696
GFYGNP T+G+CSV
Sbjct: 19 GFYGNPRTNGMCSV 32
>AL135924-4|CAD13440.1| 213|Homo sapiens zinc finger, AN1-type
domain 5 protein.
Length = 213
Score = 31.5 bits (68), Expect = 4.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +1
Query: 655 GFYGNPSTDGLCSV 696
GFYGNP T+G+CSV
Sbjct: 19 GFYGNPRTNGMCSV 32
>AL135924-3|CAI16263.1| 211|Homo sapiens zinc finger, AN1-type
domain 5 protein.
Length = 211
Score = 31.5 bits (68), Expect = 4.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +1
Query: 655 GFYGNPSTDGLCSV 696
GFYGNP T+G+CSV
Sbjct: 71 GFYGNPRTNGMCSV 84
>AJ251095-1|CAC14876.1| 208|Homo sapiens PRK1-associated protein
AWP1 protein.
Length = 208
Score = 31.5 bits (68), Expect = 4.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +1
Query: 655 GFYGNPSTDGLCSV 696
GFYGNP T+G+CSV
Sbjct: 19 GFYGNPRTNGMCSV 32
>AF261138-1|AAG44674.1| 208|Homo sapiens HT032 protein.
Length = 208
Score = 31.5 bits (68), Expect = 4.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +1
Query: 655 GFYGNPSTDGLCSV 696
GFYGNP T+G+CSV
Sbjct: 19 GFYGNPRTNGMCSV 32
>AF062347-1|AAC42602.1| 213|Homo sapiens zinc finger protein 216
splice variant 2 protein.
Length = 213
Score = 31.5 bits (68), Expect = 4.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +1
Query: 655 GFYGNPSTDGLCSV 696
GFYGNP T+G+CSV
Sbjct: 19 GFYGNPRTNGMCSV 32
>AF062346-1|AAC42601.1| 213|Homo sapiens zinc finger protein 216
splice variant 1 protein.
Length = 213
Score = 31.5 bits (68), Expect = 4.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +1
Query: 655 GFYGNPSTDGLCSV 696
GFYGNP T+G+CSV
Sbjct: 19 GFYGNPRTNGMCSV 32
>AF062072-1|AAC61801.1| 213|Homo sapiens zinc finger protein 216
protein.
Length = 213
Score = 31.5 bits (68), Expect = 4.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +1
Query: 655 GFYGNPSTDGLCSV 696
GFYGNP T+G+CSV
Sbjct: 19 GFYGNPRTNGMCSV 32
>AF061739-1|AAD17528.1| 186|Homo sapiens unknown protein.
Length = 186
Score = 31.5 bits (68), Expect = 4.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +1
Query: 655 GFYGNPSTDGLCSV 696
GFYGNP T+G+CSV
Sbjct: 19 GFYGNPRTNGMCSV 32
>Y16281-1|CAA76154.1| 529|Homo sapiens nicotinic acetylcholine
receptor alpha2 subunit precursor protein.
Length = 529
Score = 31.1 bits (67), Expect = 5.5
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 397 SYTTNKENCCAQHXPDVTWAYI 462
+Y + K +CCA+ PDVT+A++
Sbjct: 239 TYNSKKYDCCAEIYPDVTYAFV 260
>U62431-1|AAB40109.1| 529|Homo sapiens nicotinic acetylcholine
receptor alpha2 subunit precursor protein.
Length = 529
Score = 31.1 bits (67), Expect = 5.5
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 397 SYTTNKENCCAQHXPDVTWAYI 462
+Y + K +CCA+ PDVT+A++
Sbjct: 239 TYNSKKYDCCAEIYPDVTYAFV 260
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,688,944
Number of Sequences: 237096
Number of extensions: 1852441
Number of successful extensions: 6303
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 6238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6303
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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