Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_F19
         (868 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79759-3|CAB02136.1|  225|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z72506-2|CAA96621.1|  434|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z72506-1|CAA96618.1|  432|Caenorhabditis elegans Hypothetical pr...    31   1.4  
AC006733-8|AAF60490.1|  600|Caenorhabditis elegans Hypothetical ...    31   1.4  

>Z79759-3|CAB02136.1|  225|Caenorhabditis elegans Hypothetical
           protein ZK858.3 protein.
          Length = 225

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 11/39 (28%), Positives = 23/39 (58%)
 Frame = +2

Query: 257 TTFSLVLLSYFLVTGGIIYDVIVEPPSVGSTTDEHGHSR 373
           +T+ L+++   ++ GG++ D   E P +  ++DE  H R
Sbjct: 3   STYILIIVPLIIIGGGVVADNTNETPVLAHSSDEQPHQR 41


>Z72506-2|CAA96621.1|  434|Caenorhabditis elegans Hypothetical
           protein F07A5.1b protein.
          Length = 434

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 170 LPFHCFWYKSSLVTLTKIKLVDVNGKITQEPAF 72
           LPF C+ Y   L+ +    +VD +GKI  E  F
Sbjct: 120 LPFWCWAYMQKLIYIDMAFIVDYSGKINSEKTF 152


>Z72506-1|CAA96618.1|  432|Caenorhabditis elegans Hypothetical
           protein F07A5.1a protein.
          Length = 432

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 170 LPFHCFWYKSSLVTLTKIKLVDVNGKITQEPAF 72
           LPF C+ Y   L+ +    +VD +GKI  E  F
Sbjct: 120 LPFWCWAYMQKLIYIDMAFIVDYSGKINSEKTF 152


>AC006733-8|AAF60490.1|  600|Caenorhabditis elegans Hypothetical
           protein Y32H12A.7 protein.
          Length = 600

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 19/66 (28%), Positives = 32/66 (48%)
 Frame = +2

Query: 89  LSCR*RQQVLFLLK*QVRICTKSSEMEGLFAIPFTVLEIPNIKIKKPTWLQAPSAMTTFS 268
           L C    Q  +LL  Q ++  + S M G+  +P T++ +    I+K    +  S    FS
Sbjct: 45  LKCEAEHQDPWLLVPQKKVVVEKSTMMGIITLPITLIVVTYKAIRK--MFRCISLFLRFS 102

Query: 269 LVLLSY 286
            +LL+Y
Sbjct: 103 PILLTY 108


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,640,616
Number of Sequences: 27780
Number of extensions: 388643
Number of successful extensions: 819
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)