Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_F18
(805 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0059 - 394001-394708 30 2.5
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 30 2.5
03_05_1153 + 30787574-30787608,30787982-30788089,30788651-307886... 29 4.3
01_06_1377 + 36764461-36765339 29 4.3
01_06_0046 + 25943183-25943590 26 4.5
07_01_0080 + 587674-588510 28 7.6
02_05_0686 - 30900748-30902167,30903442-30904742 28 7.6
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 28 7.6
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 28 10.0
08_02_1084 - 24232968-24234779 28 10.0
06_01_0893 - 6834350-6834464,6835042-6835218,6835301-6835350,683... 28 10.0
04_04_1046 + 30405805-30405858,30405991-30407950,30408460-30408476 28 10.0
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 28 10.0
01_01_0898 + 7078900-7079079,7080269-7080301,7080480-7080653,708... 28 10.0
>08_01_0059 - 394001-394708
Length = 235
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +2
Query: 533 PPXKKKPPXKXFXXPPPPGEXXXFXPPP 616
PP + PP PPPP + PPP
Sbjct: 20 PPRRAPPPPSPPIRPPPPPTPRPYAPPP 47
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +2
Query: 533 PPXKKKPPXKXFXXPPPPGEXXXFXPPP 616
PP +PP + PPPP PPP
Sbjct: 75 PPPAPRPPRRHHRIPPPPPPLLPTPPPP 102
>03_05_1153 +
30787574-30787608,30787982-30788089,30788651-30788689,
30789181-30789184,30789496-30789580,30789609-30790321
Length = 327
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 533 PPXKKKPPXKXFXXPPPPGEXXXFXPPP 616
P + +PP K PPPP E PPP
Sbjct: 179 PEPEPEPPKKEEPQPPPPKEEEKPEPPP 206
>01_06_1377 + 36764461-36765339
Length = 292
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/67 (23%), Positives = 23/67 (34%)
Frame = +2
Query: 542 KKKPPXKXFXXPPPPGEXXXFXPPPXXXFFFXXXXKKXXXXFXXXXXXXGGXXXXXPPPP 721
++ PP PPP F PPP + + + GG PPPP
Sbjct: 152 ERSPPPPEPQYPPPSSSPYYFPPPPPPAYSAPPPPQYGSEQY----YRSGGYYSAPPPPP 207
Query: 722 XFFFXXG 742
+ + G
Sbjct: 208 QYEYTAG 214
>01_06_0046 + 25943183-25943590
Length = 135
Score = 26.2 bits (55), Expect(2) = 4.5
Identities = 11/29 (37%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = +2
Query: 533 PPXKKKPPXKXFXXPPPPG-EXXXFXPPP 616
PP PP + PPPP + PPP
Sbjct: 52 PPALPPPPPYYYYSPPPPAYYPGSYCPPP 80
Score = 21.4 bits (43), Expect(2) = 4.5
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +2
Query: 710 PPPPXFFFXXGGG 748
PPPP + GGG
Sbjct: 78 PPPPAAYVQFGGG 90
>07_01_0080 + 587674-588510
Length = 278
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +2
Query: 524 FFXPPXKKKPPXKXFXXPPPPGEXXXFXPPPXXXFF 631
F PP PP PPPP PPP F
Sbjct: 88 FRRPPPPPPPPPSSGSPPPPPPPPPPPPPPPPPPLF 123
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 533 PPXKKKPPXKXFXXPPPPGEXXXFXPPP 616
PP K PP PPPP PPP
Sbjct: 339 PPPKGPPPPPPAKGPPPPPPPKGPSPPP 366
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 533 PPXKKKPPXKXFXXPPPPGEXXXFXPPP 616
PP K PP PPPP PPP
Sbjct: 330 PPPKAAPPPPPPKGPPPPPPAKGPPPPP 357
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +2
Query: 533 PPXKKKPPXKXFXXPPPPGEXXXFXPPP 616
PP + PP + PPPP PPP
Sbjct: 432 PPPEHPPPPESTSPPPPPTSDPPPVPPP 459
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 533 PPXKKKPPXKXFXXPPPPGEXXXFXPPP 616
PP +PP PPPPG+ PPP
Sbjct: 614 PPPPPRPPGAP-PPPPPPGKPGGPPPPP 640
>08_02_1084 - 24232968-24234779
Length = 603
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +2
Query: 497 PXXXPXGEXFFXPPXKKKPPXKXFXXPPPP 586
P P + PP +++PP + PPPP
Sbjct: 69 PQKQPPSQQLPPPPQQQQPPPQHSLPPPPP 98
>06_01_0893 -
6834350-6834464,6835042-6835218,6835301-6835350,
6836348-6836416,6836495-6836593,6836681-6836759,
6837604-6837704,6838645-6838713,6839548-6839588,
6839793-6841159,6841472-6841575,6841914-6842351,
6843040-6843567
Length = 1078
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3
Query: 749 PPPPXKKKXXGGGG 708
PPPP KK GGGG
Sbjct: 23 PPPPVSKKGGGGGG 36
>04_04_1046 + 30405805-30405858,30405991-30407950,30408460-30408476
Length = 676
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +2
Query: 533 PPXKKKPPXKXFXXPPPPGEXXXFXPPP 616
PP + PP PPP G + PPP
Sbjct: 490 PPPRGNPPSWVPLPPPPGGNAPSWVPPP 517
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 27.9 bits (59), Expect = 10.0
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = +2
Query: 497 PXXXPXGEXFFXPPXKKKPPXKXFXXPPPPGEXXXFXPPP 616
P P G + P +PP PPPPG PPP
Sbjct: 423 PPPPPPGS--YAPVPWGQPPPYASYPPPPPGSSMYNPPPP 460
>01_01_0898 + 7078900-7079079,7080269-7080301,7080480-7080653,
7080866-7083890,7084253-7084596
Length = 1251
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 23 TIGNSLRFDIWIFVI*SFEYLHHRNYE 103
++G R DI + V + EYLHH +YE
Sbjct: 1059 SLGLLKRLDIMLDVSMAMEYLHHEHYE 1085
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,227,514
Number of Sequences: 37544
Number of extensions: 364293
Number of successful extensions: 1292
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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