Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_F14
         (904 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0438 - 18200329-18200430,18201203-18201335,18201964-182020...    99   4e-21
10_08_1034 + 22461397-22461702,22462311-22462524,22464936-224649...    30   2.9  
10_08_0985 - 22042801-22042963,22043019-22043138,22043261-220435...    30   2.9  
12_01_0227 - 1718726-1721183,1721804-1721957,1722090-1722165,172...    29   5.1  
11_01_0229 - 1771701-1774164,1774694-1774847,1774980-1775055,177...    29   5.1  
07_03_0270 + 16094334-16094539,16095067-16095177,16095431-16095896     29   6.7  
03_06_0060 + 31341233-31342009,31342752-31342871,31343401-313435...    29   6.7  

>07_03_0438 -
           18200329-18200430,18201203-18201335,18201964-18202034,
           18202377-18202466,18203200-18203288,18203886-18203961,
           18204094-18204264
          Length = 243

 Score = 99.1 bits (236), Expect = 4e-21
 Identities = 53/130 (40%), Positives = 74/130 (56%), Gaps = 3/130 (2%)
 Frame = +3

Query: 237 LEQFVLLAKGAKGSA--CAELIKQVLEAPGVHVFGELLEMPNIKELESGPYATHLKTLNL 410
           +EQF   A     SA   A L+ +    P +  F ELL +P + +L    YA+ L  L L
Sbjct: 13  IEQFSAQAAALSSSAPQLAALVLEATSHPALFAFSELLSLPALSKLTGTQYASSLDVLRL 72

Query: 411 FAYGTYKDYIENKSDYLELTTVQCKKLQHLTIATLATQEKCIPYSVLLEELDIKNVRDLE 590
           FAYGT KDY  N  +   L   Q +KL+ L++ TLA   K +PY  L++ELD+ NVR+LE
Sbjct: 73  FAYGTLKDYKSNSGNLPALLPDQVRKLKQLSVLTLAESTKVLPYDQLMQELDVSNVRELE 132

Query: 591 DLII-EAIYA 617
           D +I E +Y+
Sbjct: 133 DFLINECMYS 142


>10_08_1034 +
           22461397-22461702,22462311-22462524,22464936-22464997,
           22465035-22465381,22465495-22465591
          Length = 341

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 501 SDAVISCTGLWLILNSPICSQCSPYMC 421
           +DAV  C+GL+ I N+P  SQ   + C
Sbjct: 74  ADAVHGCSGLFAIFNTPSSSQSQSHSC 100


>10_08_0985 -
           22042801-22042963,22043019-22043138,22043261-22043562,
           22044055-22044351,22044448-22044556,22044826-22045358,
           22045446-22045644,22045741-22045865,22045937-22046020,
           22046093-22046221,22046337-22046465,22046593-22046739,
           22047106-22047346,22047859-22047980
          Length = 899

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
 Frame = +3

Query: 378 PYATHLKTLNLFAYGTYKDYIENKSDYLELTT---VQCKKLQHLTIATLATQEKCIPYSV 548
           P    L+  NLF+    K Y +N  +YL +      + KK  +        +E+ IP  V
Sbjct: 399 PGKEELRQKNLFSVSDCKMYWQNSGEYLAVQVDRYTKTKKSTYTGFELFRIKERDIPIEV 458

Query: 549 LLEELDIKN 575
           L  ELD KN
Sbjct: 459 L--ELDNKN 465


>12_01_0227 - 1718726-1721183,1721804-1721957,1722090-1722165,
            1722327-1722485,1722552-1722662,1722791-1722841,
            1722948-1723192,1723745-1725278
          Length = 1595

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 561  IPQVTHCKGYISLVLQVLQWSDA 493
            +P+VTHC   + L+++  +W DA
Sbjct: 940  LPEVTHCNRLLKLLVEQRRWDDA 962


>11_01_0229 -
           1771701-1774164,1774694-1774847,1774980-1775055,
           1775439-1775477,1778516-1778674,1778741-1778851,
           1779014-1779064,1779173-1779256
          Length = 1045

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 561 IPQVTHCKGYISLVLQVLQWSDA 493
           +P+VTHC   + L+++  +W DA
Sbjct: 389 LPEVTHCNRLLKLLVEQRRWDDA 411


>07_03_0270 + 16094334-16094539,16095067-16095177,16095431-16095896
          Length = 260

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 498 DAVISCTGLWLILNSPICSQ 439
           D +++CT  WL + SP CSQ
Sbjct: 190 DMMMACTPSWLFIPSPACSQ 209


>03_06_0060 +
           31341233-31342009,31342752-31342871,31343401-31343517,
           31343615-31343704,31344279-31344386,31345124-31345306
          Length = 464

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +3

Query: 195 DEPSSLLS-FSSNHPLEQFVLLAKGAKGSACAELIKQVLEAPGVHVFGELLEMP 353
           D+   LLS  +S HPL  +  L +GA G+A    +K V    GV++  +    P
Sbjct: 391 DQSRELLSTLASMHPLSAYERLRRGALGTAVDADVKPVPARDGVNLMEKARPKP 444


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,444,535
Number of Sequences: 37544
Number of extensions: 401956
Number of successful extensions: 977
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)