Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_F09
         (920 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.4  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   5.9  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   5.9  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   5.9  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   7.7  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   7.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 6/37 (16%), Positives = 21/37 (56%)
 Frame = -3

Query: 186 FFFFLDTIVIVILVQKVICKGFLFGCIKY*MCVYYYF 76
           ++F+   I+  + +  ++C  +    + + +C+YY++
Sbjct: 114 YYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFY 150



 Score = 22.2 bits (45), Expect = 5.9
 Identities = 7/28 (25%), Positives = 15/28 (53%)
 Frame = -3

Query: 159 IVILVQKVICKGFLFGCIKY*MCVYYYF 76
           I+  V  ++C  + +      +CVYY++
Sbjct: 90  IIFTVHFLLCTYYFYYAFIILLCVYYFY 117


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 538 GVSFLYYVINVYFWIVPQKLSHLAIFSL 455
           GVSF+  VI ++F+    +   L   SL
Sbjct: 532 GVSFVVIVITIFFFTANVQAGELYFMSL 559


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -2

Query: 229 CFSGHKLSSFSGRILLLLFGHHCDCYPC 146
           C  G  + S S ++L LLF      Y C
Sbjct: 212 CLCGASVHSESSKVLPLLFSVSSSSYNC 239


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 538 GVSFLYYVINVYFWIVPQKLSHLAIFSL 455
           GVSF+  VI ++F+    +   L   SL
Sbjct: 257 GVSFVVIVITIFFFTANVQAGELYFMSL 284


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = -1

Query: 551 RQQTWGIFPLLCDQCLFLDSPAKTFSSCHILAVLLHDEFFVDKPL 417
           R +TW +   +C    F++      S   ILA+     + + KPL
Sbjct: 132 RPETWVLGREMCKAVPFVELTVAHASVLTILAISFERYYAICKPL 176


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = -1

Query: 551 RQQTWGIFPLLCDQCLFLDSPAKTFSSCHILAVLLHDEFFVDKPL 417
           R +TW +   +C    F++      S   ILA+     + + KPL
Sbjct: 132 RPETWVLGREMCKAVPFVELTVAHASVLTILAISFERYYAICKPL 176


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,210
Number of Sequences: 336
Number of extensions: 5214
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25754817
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)