Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_F09
(920 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006679-7|AAK84463.1| 531|Caenorhabditis elegans Lipid deplete... 162 4e-40
Z92830-12|CAE17777.1| 191|Caenorhabditis elegans Hypothetical p... 34 0.16
Z81109-12|CAE17917.2| 364|Caenorhabditis elegans Hypothetical p... 33 0.29
Z82055-7|CAB04849.1| 387|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z77663-4|CAB01213.1| 605|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z72512-8|CAH04717.1| 583|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z72512-7|CAA96668.3| 568|Caenorhabditis elegans Hypothetical pr... 29 4.7
U23511-5|AAC46794.1| 578|Caenorhabditis elegans Hypothetical pr... 29 6.2
>AC006679-7|AAK84463.1| 531|Caenorhabditis elegans Lipid depleted
protein 7 protein.
Length = 531
Score = 162 bits (393), Expect = 4e-40
Identities = 81/215 (37%), Positives = 118/215 (54%)
Frame = +2
Query: 188 YSSGEGAQFMTRXXXXXXXXXXXXDFRRICILKGIYPREPRNRKRAQKGAGGIKTLYHTK 367
Y++G +M+R DFRR+CI+KGIYP EP ++K+A KG+ K Y+ K
Sbjct: 9 YTAGAAVAYMSRKQALKKLQLTLKDFRRLCIIKGIYPHEPAHKKQANKGSTANKVFYYRK 68
Query: 368 DIKFLLHEPIIWKLRELKVYQQKIRRARAQREYGKMRKFLRDYPEINIDHIVKERYPTFV 547
DI FL HEPII K R+ KV+ +K+ +A++E K++K + P ++D IVKER+PTF
Sbjct: 69 DINFLAHEPIINKFRDYKVFLRKLNHLKAKKEEDKLKKLYENKPVYSLDTIVKERFPTFG 128
Query: 548 XXXXXXXXXXXXXXXXSTFPSLKKVPRDQSFLCRRLTVEFMHAVIAAKALRKVFVSVKGF 727
+ P + + CR+LT EFMH VI +++LR F+S+KG
Sbjct: 129 SALRDMDDALSLCFTFAMLPHTRVLKEGMIDSCRKLTAEFMHYVIESQSLRNTFISIKGI 188
Query: 728 YYQVEFEGQTIHGLFHIISHSSHKQDEVDFKIMAT 832
YYQ E G+ I + H D VDF ++ T
Sbjct: 189 YYQAEVHGEKITWVVPHERGLPHVTD-VDFTVLVT 222
>Z92830-12|CAE17777.1| 191|Caenorhabditis elegans Hypothetical
protein F11A5.15 protein.
Length = 191
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = -2
Query: 550 VNKRGVSFLYYVINVYFWIVPQKLSHLAIFSLCSCTTNFLL 428
++KR ++ + N++F+I+P L + I+ L SC +N LL
Sbjct: 7 ISKRKSIYILIISNIFFFIIPLYLIVIGIWKLTSCPSNQLL 47
>Z81109-12|CAE17917.2| 364|Caenorhabditis elegans Hypothetical
protein R10D12.17 protein.
Length = 364
Score = 33.1 bits (72), Expect = 0.29
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 744 LKDKQYMDCSTSFLIPATSKMK*TSKLWRHCGIYTMMLGFCEFKLY 881
L D +Y C SF+I + T K R IY +++G C +LY
Sbjct: 11 LSDHEYTVCFFSFIINIVHLLILTRKYMRTASIYVLLIGVCIAELY 56
>Z82055-7|CAB04849.1| 387|Caenorhabditis elegans Hypothetical
protein T26H2.8 protein.
Length = 387
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -2
Query: 154 YPCSESNM*RFFVWLY*ILNVRLLLFHKFAHFRKIQPKILRIPYSE 17
Y CS SN RF ++ +L+ L+F + F +I IL + ++E
Sbjct: 30 YNCSRSNPIRFLFVIFSLLSFLALIFRAYWMFFQISSTILSLGWAE 75
>Z77663-4|CAB01213.1| 605|Caenorhabditis elegans Hypothetical
protein F53F4.4 protein.
Length = 605
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +1
Query: 142 LNKDNNHN--GVQKEEEVFFRRRSSVYDQKSSA*ETTTILERFQTYLYFERNIPPRT*KP 315
LN D+ + GV KEEEV S+ + S T+ +LE T + E I ++ +
Sbjct: 177 LNVDDKNTTLGVSKEEEVIATTESTKEKKLKSGEVTSHVLESTTTVEFLENKISEKSNEI 236
Query: 316 KEGS 327
EGS
Sbjct: 237 VEGS 240
>Z72512-8|CAH04717.1| 583|Caenorhabditis elegans Hypothetical
protein R07B5.8b protein.
Length = 583
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 298 PRT*KPKEGSKRCRRNQNTLSH*RYKIFTTRANNMETEGTKGLSTKNSSC 447
PRT +P+ + RR + LS I T R+N++ +G+ S+ +SC
Sbjct: 13 PRTPRPRYSPEAQRRTNSRLS--ALTIDTNRSNDLNVDGSAPSSSSAASC 60
>Z72512-7|CAA96668.3| 568|Caenorhabditis elegans Hypothetical
protein R07B5.8a protein.
Length = 568
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 298 PRT*KPKEGSKRCRRNQNTLSH*RYKIFTTRANNMETEGTKGLSTKNSSC 447
PRT +P+ + RR + LS I T R+N++ +G+ S+ +SC
Sbjct: 58 PRTPRPRYSPEAQRRTNSRLS--ALTIDTNRSNDLNVDGSAPSSSSAASC 105
>U23511-5|AAC46794.1| 578|Caenorhabditis elegans Hypothetical
protein C32D5.6 protein.
Length = 578
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 329 KGAGGIKTLYHT-KDIKFLLHEPIIWKLRELKVYQQ 433
KGA I+T Y T + + L++EP +W R KV +Q
Sbjct: 164 KGALNIRTCYQTYRYCEKLMNEPSVWVGRNKKVQEQ 199
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,345,979
Number of Sequences: 27780
Number of extensions: 470096
Number of successful extensions: 1038
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -