Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_F05
(896 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22180-1|CAA80176.2| 371|Caenorhabditis elegans Hypothetical pr... 221 5e-58
Z22180-2|CAD54146.1| 392|Caenorhabditis elegans Hypothetical pr... 212 3e-55
Z22180-10|CAO82052.1| 360|Caenorhabditis elegans Hypothetical p... 208 4e-54
Z99171-3|CAB16310.1| 374|Caenorhabditis elegans Hypothetical pr... 168 5e-42
Z22180-9|CAO82051.1| 304|Caenorhabditis elegans Hypothetical pr... 97 2e-20
>Z22180-1|CAA80176.2| 371|Caenorhabditis elegans Hypothetical
protein K11H3.1a protein.
Length = 371
Score = 221 bits (540), Expect = 5e-58
Identities = 117/245 (47%), Positives = 154/245 (62%), Gaps = 3/245 (1%)
Frame = +1
Query: 115 FKYFVRDCNILDMADKQPKNKVCIVGSGNWGSAIAKIVGRNAASLSN-FEDRVTMWVYEE 291
F+YF I M+ K KV I+GSGNWGSAIA+IVG S + F+ V MWV+EE
Sbjct: 9 FRYFGTTSTIATMSPK----KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEE 64
Query: 292 IIEGKKLTEIINETHENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICS 471
I+ G+KL+E+IN HEN+KYLPG LP+NVVAV D+VE+ + +++L+FVVPHQFV+ IC
Sbjct: 65 IVNGEKLSEVINNRHENIKYLPGKVLPNNVVAVTDLVESCEGSNVLVFVVPHQFVKGICE 124
Query: 472 TLLGKIKPTAAALSLIKGFDIAEGGGIDLISHIITRCLKIPCAVLMGANIASEVAEEKFC 651
L+GKI A+SLIKG + GG+ LIS I LKI +VLMGAN+A EVA + FC
Sbjct: 125 KLVGKIPADTQAISLIKGVSTEKRGGLKLISEEIKEILKIEVSVLMGANLAPEVANDNFC 184
Query: 652 ETXIGL--SGRNAGSVNAGYHTDRLLQGRGWWTMKNPFKIFGTVKNIVAVGAGFVDGLGY 825
E IG + + +HTD + ++ G +KN+VA AGF DGLGY
Sbjct: 185 EATIGCKRKAEDGPLLKKLFHTDNF--RINVVEDAHTVELCGALKNVVACAAGFTDGLGY 242
Query: 826 XDTQR 840
D +
Sbjct: 243 GDNTK 247
>Z22180-2|CAD54146.1| 392|Caenorhabditis elegans Hypothetical
protein K11H3.1b protein.
Length = 392
Score = 212 bits (517), Expect = 3e-55
Identities = 119/254 (46%), Positives = 156/254 (61%), Gaps = 12/254 (4%)
Frame = +1
Query: 115 FKYFVRDCNILDMADKQPKNKVCIVGSGNWGSAIAKIVGRNAASLSN-FEDRVTMWVYEE 291
F+YF I M+ K KV I+GSGNWGSAIA+IVG S + F+ V MWV+EE
Sbjct: 21 FRYFGTTSTIATMSPK----KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEE 76
Query: 292 IIEGKKLTEIINETHENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICS 471
I+ G+KL+E+IN HEN+KYLPG LP+NVVAV D+VE+ + +++L+FVVPHQFV+ IC
Sbjct: 77 IVNGEKLSEVINNRHENIKYLPGKVLPNNVVAVTDLVESCEGSNVLVFVVPHQFVKGICE 136
Query: 472 TLLGKIKPTAAALSLIKG--FD-------IAEGGGIDLISHIITRCLKIPCAVLMGANIA 624
L+GKI A+SLIKG FD + GG+ LIS I LKI +VLMGAN+A
Sbjct: 137 KLVGKIPADTQAISLIKGISFDKTNQGVSTEKRGGLKLISEEIKEILKIEVSVLMGANLA 196
Query: 625 SEVAEEKFCETXIGL--SGRNAGSVNAGYHTDRLLQGRGWWTMKNPFKIFGTVKNIVAVG 798
EVA + FCE IG + + +HTD + ++ G +KN+VA
Sbjct: 197 PEVANDNFCEATIGCKRKAEDGPLLKKLFHTDNF--RINVVEDAHTVELCGALKNVVACA 254
Query: 799 AGFVDGLGYXDTQR 840
AGF DGLGY D +
Sbjct: 255 AGFTDGLGYGDNTK 268
>Z22180-10|CAO82052.1| 360|Caenorhabditis elegans Hypothetical
protein K11H3.1d protein.
Length = 360
Score = 208 bits (508), Expect = 4e-54
Identities = 115/237 (48%), Positives = 150/237 (63%), Gaps = 12/237 (5%)
Frame = +1
Query: 166 PKNKVCIVGSGNWGSAIAKIVGRNAASLSN-FEDRVTMWVYEEIIEGKKLTEIINETHEN 342
PK KV I+GSGNWGSAIA+IVG S + F+ V MWV+EEI+ G+KL+E+IN HEN
Sbjct: 3 PK-KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEEIVNGEKLSEVINNRHEN 61
Query: 343 VKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAALSLIK 522
+KYLPG LP+NVVAV D+VE+ + +++L+FVVPHQFV+ IC L+GKI A+SLIK
Sbjct: 62 IKYLPGKVLPNNVVAVTDLVESCEGSNVLVFVVPHQFVKGICEKLVGKIPADTQAISLIK 121
Query: 523 G--FD-------IAEGGGIDLISHIITRCLKIPCAVLMGANIASEVAEEKFCETXIGL-- 669
G FD + GG+ LIS I LKI +VLMGAN+A EVA + FCE IG
Sbjct: 122 GISFDKTNQGVSTEKRGGLKLISEEIKEILKIEVSVLMGANLAPEVANDNFCEATIGCKR 181
Query: 670 SGRNAGSVNAGYHTDRLLQGRGWWTMKNPFKIFGTVKNIVAVGAGFVDGLGYXDTQR 840
+ + +HTD + ++ G +KN+VA AGF DGLGY D +
Sbjct: 182 KAEDGPLLKKLFHTDNF--RINVVEDAHTVELCGALKNVVACAAGFTDGLGYGDNTK 236
>Z99171-3|CAB16310.1| 374|Caenorhabditis elegans Hypothetical
protein F47G4.3 protein.
Length = 374
Score = 168 bits (408), Expect = 5e-42
Identities = 99/227 (43%), Positives = 131/227 (57%), Gaps = 8/227 (3%)
Frame = +1
Query: 169 KNKVCIVGSGNWGSAIAKIVGRNAASLSN-FEDRVTMWVYEEIIEGK---KLTEIINETH 336
+ K+ IVG GNWGSAIA +VG+ + F+ V++W + G + E IN TH
Sbjct: 21 RKKIAIVGGGNWGSAIACVVGKTVKAQDEVFQPIVSIWCRDSRKPGDLSPSIAETINSTH 80
Query: 337 ENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAALSL 516
EN KYLPG ++P NVVA ++EA + A +LI VVPHQ + IC L GK++ A A+SL
Sbjct: 81 ENPKYLPGRRIPDNVVATSSLLEACQSAHILILVVPHQGIPQICDELRGKLQKGAHAISL 140
Query: 517 IKGFDIA-EGGGI--DLISHIITRCLKIPCAVLMGANIASEVAEEKFCETXIGL-SGRNA 684
KG + E G I LIS I R L + C+VLMGAN+A EVA+ KFCE IG S +N
Sbjct: 141 TKGISSSCENGEIKMQLISEDIERALGVQCSVLMGANLAGEVADGKFCEATIGCKSLKNG 200
Query: 685 GSVNAGYHTDRLLQGRGWWTMKNPFKIFGTVKNIVAVGAGFVDGLGY 825
+ + T T ++ G +KNIVA AGF DGLG+
Sbjct: 201 EELKKVFDTPNF--RIRVTTDYEAVELCGALKNIVACAAGFADGLGW 245
>Z22180-9|CAO82051.1| 304|Caenorhabditis elegans Hypothetical
protein K11H3.1c protein.
Length = 304
Score = 97.1 bits (231), Expect = 2e-20
Identities = 45/73 (61%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
Frame = +1
Query: 166 PKNKVCIVGSGNWGSAIAKIVGRNAASLSN-FEDRVTMWVYEEIIEGKKLTEIINETHEN 342
PK KV I+GSGNWGSAIA+IVG S + F+ V MWV+EEI+ G+KL+E+IN HEN
Sbjct: 3 PK-KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEEIVNGEKLSEVINNRHEN 61
Query: 343 VKYLPGHKLPSNV 381
+KYLPG LP+NV
Sbjct: 62 IKYLPGKVLPNNV 74
Score = 71.3 bits (167), Expect = 9e-13
Identities = 42/108 (38%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Frame = +1
Query: 523 GFDIAEGGGIDLISHIITRCLKIPCAVLMGANIASEVAEEKFCETXIGL--SGRNAGSVN 696
G + GG+ LIS I LKI +VLMGAN+A EVA + FCE IG + +
Sbjct: 75 GVSTEKRGGLKLISEEIKEILKIEVSVLMGANLAPEVANDNFCEATIGCKRKAEDGPLLK 134
Query: 697 AGYHTDRLLQGRGWWTMKNPFKIFGTVKNIVAVGAGFVDGLGYXDTQR 840
+HTD + ++ G +KN+VA AGF DGLGY D +
Sbjct: 135 KLFHTDNF--RINVVEDAHTVELCGALKNVVACAAGFTDGLGYGDNTK 180
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,973,859
Number of Sequences: 27780
Number of extensions: 396496
Number of successful extensions: 1136
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -