Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_F04
(899 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 280 3e-74
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 272 6e-72
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 215 1e-54
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 213 5e-54
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 197 3e-49
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 192 8e-48
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 188 2e-46
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 183 5e-45
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 176 5e-43
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 173 4e-42
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 173 7e-42
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 173 7e-42
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 172 9e-42
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 166 6e-40
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 165 1e-39
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 152 1e-35
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 142 1e-32
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 124 2e-27
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 121 3e-26
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 112 1e-23
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 101 2e-20
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 98 2e-19
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 95 2e-18
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 90 6e-17
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 89 2e-16
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 87 6e-16
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 80 9e-14
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 80 9e-14
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 80 9e-14
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 75 3e-12
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 73 1e-11
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 69 1e-10
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 66 2e-09
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 52 3e-05
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 47 6e-04
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 47 6e-04
UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole gen... 42 0.021
UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole gen... 38 0.35
UniRef50_Q9VDD2 Cluster: CG17299-PF, isoform F; n=18; Diptera|Re... 36 1.4
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 1.9
UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein DKFZp4... 34 4.3
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 34 5.7
UniRef50_A2QMQ0 Cluster: Contig An07c0080, complete genome; n=11... 34 5.7
UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;... 33 7.5
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 280 bits (687), Expect = 3e-74
Identities = 141/240 (58%), Positives = 162/240 (67%), Gaps = 1/240 (0%)
Frame = +2
Query: 170 SVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESW 349
SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESW
Sbjct: 9 SVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESW 67
Query: 350 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 529
GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 68 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSA 127
Query: 530 XXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQ 709
++GH IE++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQ
Sbjct: 128 LAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQ 187
Query: 710 RLRAGKGKMRNRRRIXVRGPS*XSXRXR-VXRALXKIPGWGPVILKTXPX*XWXPXGHFG 886
R+RAGKGKMRNRRRI RGP + +A IPG + + P GH G
Sbjct: 188 RMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVG 247
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 272 bits (668), Expect = 6e-72
Identities = 136/240 (56%), Positives = 163/240 (67%), Gaps = 1/240 (0%)
Frame = +2
Query: 170 SVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESW 349
SVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+ AGHQTSAESW
Sbjct: 11 SVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESW 70
Query: 350 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 529
GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 71 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSA 130
Query: 530 XXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQ 709
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQ
Sbjct: 131 IAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQ 190
Query: 710 RLRAGKGKMRNRRRIXVRGPS*XSXRXR-VXRALXKIPGWGPVILKTXPX*XWXPXGHFG 886
R RAG+G MR+RRRI RGP + + +A IPG + + P GH G
Sbjct: 191 RFRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVG 250
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 215 bits (526), Expect = 1e-54
Identities = 110/218 (50%), Positives = 135/218 (61%)
Frame = +2
Query: 170 SVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESW 349
SVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++ +G SA SW
Sbjct: 8 SVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNHSAHSW 66
Query: 350 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 529
GTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 67 GTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRFAVVSA 126
Query: 530 XXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQ 709
+RGH I +PE+PLVV D +Q KTK+A+ FL+ + A D+ +V S+
Sbjct: 127 LAASSVPSLVMSRGHQIGNVPEVPLVVEDSIQGYEKTKEAMAFLKAIAAIDDVNRVNDSR 186
Query: 710 RLRAGKGKMRNRRRIXVRGPS*XSXRXRVXRALXKIPG 823
+RAG+GKMRNRR + RGP + RA I G
Sbjct: 187 EIRAGRGKMRNRRYVARRGPMLVMPNNKGTRAFRNIFG 224
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 213 bits (520), Expect = 5e-54
Identities = 114/238 (47%), Positives = 138/238 (57%), Gaps = 7/238 (2%)
Frame = +2
Query: 194 TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVAR 373
T G PLP VF +PIRPD+V VH M+KN RQPY VS++AGHQTSAESWGTGRAVAR
Sbjct: 15 TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQTSAESWGTGRAVAR 74
Query: 374 IPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXX 553
IPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 75 IPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLGQKRFATVSALAASGVPA 134
Query: 554 XXQARGHIIEKIPELPLVVADKVQE---INKTKQAVIFLRRLKAWSDILKVYKSQRLRAG 724
ARGH I ++ E+PLV+ +V E I +T A L+ + A D+ KV S++LRAG
Sbjct: 135 LLFARGHQISEVAEVPLVINSEVFEGAKIARTAAAAGLLKTVGALKDVEKVKDSRKLRAG 194
Query: 725 KGKMRNRRRIXVRGP----S*XSXRXRVXRALXKIPGWGPVILKTXPX*XWXPXGHFG 886
KGK+R RR RGP + + RA +PG + + P GH G
Sbjct: 195 KGKLRGRRHRQRRGPLVVYDGATDGKELVRAFRNLPGVETCDVYSLNLLQLAPGGHLG 252
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 197 bits (481), Expect = 3e-49
Identities = 102/202 (50%), Positives = 124/202 (61%), Gaps = 2/202 (0%)
Frame = +2
Query: 170 SVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESW 349
SV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS +AGHQ SAESW
Sbjct: 9 SVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAGHQHSAESW 68
Query: 350 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 529
GTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 69 GTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTEKRHAVAAA 128
Query: 530 XXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRL-KAWSDILK-VYK 703
ARGH I +PELPLV+++++Q INKT AV F + K + +K +
Sbjct: 129 IAATGCPSLVMARGHRINNVPELPLVISNEIQNINKTSTAVEFFKNFGKGLEEEMKRIES 188
Query: 704 SQRLRAGKGKMRNRRRIXVRGP 769
S +R GKGKMRNRRR+ GP
Sbjct: 189 SIAIRCGKGKMRNRRRVCAVGP 210
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 192 bits (469), Expect = 8e-48
Identities = 99/221 (44%), Positives = 130/221 (58%), Gaps = 3/221 (1%)
Frame = +2
Query: 170 SVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 346
SV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q SAES
Sbjct: 8 SVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHSAES 67
Query: 347 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 526
WGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K WRRWH
Sbjct: 68 WGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVWRRWHRRVNIKQKRHAAAT 127
Query: 527 XXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKS 706
ARGH I ++P++PLVV DK++ KT A+ FL+R A+ D+ KV +
Sbjct: 128 AVAATGIVPLVLARGHRISQVPQIPLVVEDKIESYEKTTDALNFLKRFGAFEDVQKVVST 187
Query: 707 QRLRAGKGKMRNRRRIXVRGP--S*XSXRXRVXRALXKIPG 823
+ +RAG K R ++ +GP + ++ +A +PG
Sbjct: 188 KVVRAGISKQRGKKYRVRKGPLVVYFNENAKLLKAFRNVPG 228
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 188 bits (457), Expect = 2e-46
Identities = 101/219 (46%), Positives = 128/219 (58%), Gaps = 1/219 (0%)
Frame = +2
Query: 170 SVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESW 349
+VY + V G + +P VF+ PIR DL+ + +MSKN R PY V AG++TSAESW
Sbjct: 9 NVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAGYETSAESW 67
Query: 350 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 529
GTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 68 GTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRWGRKINLKEKRYAVCSS 127
Query: 530 XXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQ 709
ARGH I + E+PLV ++ ++ + KTK A+ FL L ++ ++ KS
Sbjct: 128 IAASGITSLVLARGHRISNLKEVPLVASNDIESMQKTKDALKFLISLGLRDEVNRLIKSX 187
Query: 710 RLRAGKGKMRNRRRIXVRGP-S*XSXRXRVXRALXKIPG 823
+LRA GKMRNR+ GP S + +A IPG
Sbjct: 188 KLRARXGKMRNRKYKISNGPLIIYSXDSGIKKAFRNIPG 226
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 183 bits (446), Expect = 5e-45
Identities = 91/184 (49%), Positives = 116/184 (63%), Gaps = 1/184 (0%)
Frame = +2
Query: 218 LPFVFK-APIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 394
+P V + +PIRPD+V+ VH++++KN RQP+ AGHQ SAESWGTGRAVAR+PR+ G
Sbjct: 23 VPSVIRYSPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAESWGTGRAVARVPRISGS 82
Query: 395 GTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGH 574
GT R+GQ AF N RGG M++P K WRRWH ARGH
Sbjct: 83 GTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVNVTQRRFAMCSAIAASSNPSLVLARGH 142
Query: 575 IIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRI 754
I+ +PELPLVV+D V++I KTK+AV L LKA D+ +S+R+R G GK RNRR
Sbjct: 143 KIDNVPELPLVVSDDVEQIKKTKEAVKVLAALKASDDVKHSAESKRIRVGSGKARNRRYT 202
Query: 755 XVRG 766
RG
Sbjct: 203 QRRG 206
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 176 bits (429), Expect = 5e-43
Identities = 92/185 (49%), Positives = 118/185 (63%), Gaps = 1/185 (0%)
Frame = +2
Query: 218 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 397
LP VF APIR D+V+ V+ + SKN+RQP VS +AG Q SA SWGTGRAVARIPR+ G G
Sbjct: 24 LPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQHSAISWGTGRAVARIPRISGSG 83
Query: 398 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 577
+ R+GQGAFGNM R G MF+P K +R+W ARGH
Sbjct: 84 SGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMRRFAVASCIAASAVPALVSARGHH 143
Query: 578 IEKIPELPLVVADK-VQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRI 754
I +P++PLVV K + I KTKQAV L+++ A+SD+LKV S+ +RAG+GKMR R+
Sbjct: 144 IAGVPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDVLKVIASKTVRAGQGKMRGRKIK 203
Query: 755 XVRGP 769
+GP
Sbjct: 204 ERKGP 208
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 173 bits (422), Expect = 4e-42
Identities = 83/173 (47%), Positives = 110/173 (63%), Gaps = 1/173 (0%)
Frame = +2
Query: 218 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 397
+P VF AP+R DLV VH +MSKN RQ Y VSK +G+QTSA SWGTGRA+AR+PRV+GGG
Sbjct: 23 MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTSARSWGTGRAMARVPRVKGGG 82
Query: 398 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 577
THR+GQ A+ N CR G M+APT+ WRRWH +RGH
Sbjct: 83 THRAGQAAYANFCRAGGMYAPTRVWRRWHRKVNLKEKRQALASALAATAVVPVVMSRGHR 142
Query: 578 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYK-SQRLRAGKGK 733
IE + E+P+VV D +++INKTK AV L + +++ ++ K + R R G+ K
Sbjct: 143 IEALREVPMVVDDAIEQINKTKDAVKLLETIGLGAELKRIDKVTGRARDGRKK 195
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 173 bits (420), Expect = 7e-42
Identities = 84/190 (44%), Positives = 115/190 (60%)
Frame = +2
Query: 170 SVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESW 349
SV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+ +G+QTSA SW
Sbjct: 8 SVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQTSARSW 66
Query: 350 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 529
GTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ WR WH
Sbjct: 67 GTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWHRKINLKEKRLALAVS 126
Query: 530 XXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQ 709
+RGH +E +PELPLV+ D ++ + KT+ AV L + ++ +V ++
Sbjct: 127 VAATASVPLVMSRGHRVESVPELPLVLDDTMETLTKTRDAVELLNSMGLADELKRVSVTK 186
Query: 710 RLRAGKGKMR 739
R + KGK R
Sbjct: 187 RTKR-KGKKR 195
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 173 bits (420), Expect = 7e-42
Identities = 88/183 (48%), Positives = 107/183 (58%)
Frame = +2
Query: 218 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 397
LP VF PIR DLV + +RQPY VSK AG Q SAESWGTGRA+AR+PRV+GGG
Sbjct: 21 LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAESWGTGRAIARVPRVKGGG 80
Query: 398 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 577
T R+GQGAF N CR GRM PTK RRW +ARGH
Sbjct: 81 TRRAGQGAFANFCRKGRMAHPTKTHRRWARKVVENTKKIAEAMAVAASAQASLVEARGHR 140
Query: 578 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIX 757
I + LP++V+D + + KTK AV LR L ++ +V KS+ +R GKGKMRNRR
Sbjct: 141 ISDVKMLPIIVSDDIAKARKTKDAVEILRNLNMTEELKRVEKSRGVRCGKGKMRNRRYTQ 200
Query: 758 VRG 766
+G
Sbjct: 201 RKG 203
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 172 bits (419), Expect = 9e-42
Identities = 79/104 (75%), Positives = 88/104 (84%)
Frame = +2
Query: 173 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG 352
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTSAESWG
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWG 185
Query: 353 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 484
TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 186 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 166 bits (404), Expect = 6e-40
Identities = 90/208 (43%), Positives = 113/208 (54%), Gaps = 7/208 (3%)
Frame = +2
Query: 284 KNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 463
++++ V +AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPT
Sbjct: 22 ESTKDTLTVPNKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPT 81
Query: 464 KPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKV---QEIN 634
K WR+WH ARGH + +PE+PLV++ I
Sbjct: 82 KVWRKWHQKINLNQKRFATASALAASGSPALLMARGHNVSTVPEVPLVISSTAFADAAIR 141
Query: 635 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIXVRGP----S*XSXRXRVXR 802
KT AV L+ + A +D K S++LRAGKGK+R RR RGP + + +
Sbjct: 142 KTSAAVALLKAVGAGADCEKAKNSRKLRAGKGKLRGRRHKQRRGPLVIYNPDEDGKELVK 201
Query: 803 ALXKIPGWGPVILKTXPX*XWXPXGHFG 886
A IPG + + P GH G
Sbjct: 202 AFRNIPGVETSSVYSMNLLQLAPGGHLG 229
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 165 bits (401), Expect = 1e-39
Identities = 83/184 (45%), Positives = 109/184 (59%)
Frame = +2
Query: 218 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 397
+P VF + IR D+V VH +M KN RQ Y VS AG TSA SWGTGRAV+R+PRV G G
Sbjct: 19 IPKVFFSKIRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSWGTGRAVSRVPRVPGSG 78
Query: 398 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 577
THRSGQGA N CRGGR+F PT WR+WH +RG+
Sbjct: 79 THRSGQGAIANFCRGGRIFNPTTIWRKWHHKINKNQRKSAIFSAIASSSIVSIIVSRGYR 138
Query: 578 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIX 757
++ IPE+P V+ D +++I KT+ + L L + I++ ++L++GKGKMRNRR
Sbjct: 139 VKTIPEIPFVIEDSIEKIPKTRDLIKILTTL-GINSIVRNKLKRKLKSGKGKMRNRRFKK 197
Query: 758 VRGP 769
GP
Sbjct: 198 PTGP 201
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 152 bits (369), Expect = 1e-35
Identities = 78/210 (37%), Positives = 115/210 (54%), Gaps = 1/210 (0%)
Frame = +2
Query: 218 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 397
LP VF PIR ++V +V+V+++KN++QP+ AG + SA SWGTGRA A +PRV G G
Sbjct: 21 LPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKKVSAISWGTGRAKACVPRVNGSG 80
Query: 398 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 577
++R+GQGA+ N CRGG F P RRW QARGH+
Sbjct: 81 SNRNGQGAYANFCRGGHRFNPPTLLRRWFRPVPSRQRKFAIASAIAATAVVPLVQARGHV 140
Query: 578 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIX 757
+ ++ E+P+VV D VQEI +T+ AV L+++ + D+ +V R+ KGK R
Sbjct: 141 LGEVKEVPIVVVDAVQEIKRTRDAVELLKKVGVYGDVQRVLDGSVHRSSKGKFRRAAYKT 200
Query: 758 VRGPS*XSXRXR-VXRALXKIPGWGPVILK 844
+GP + + +A IPG + +K
Sbjct: 201 KKGPLVIYNEDKGIVKAFRNIPGVETISVK 230
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 142 bits (344), Expect = 1e-32
Identities = 81/208 (38%), Positives = 104/208 (50%)
Frame = +2
Query: 200 QGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIP 379
Q A P P VF P+RPD++N VH + K R PY VS+ AG Q +A SWG GRAVAR+P
Sbjct: 14 QVAELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTAHSWGPGRAVARLP 73
Query: 380 RVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXX 559
R G G GA+ N RGG M PT RRW
Sbjct: 74 RKHG------GIGAYANFARGGHMAHPTTVIRRWCRKVNLNQRRYAVASALAASANAALV 127
Query: 560 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 739
+ARGH I +P +PLVV + KTK A+ ++ + D+ + S+ +RAG+GKMR
Sbjct: 128 EARGHRIADVPSIPLVV--DTDNVTKTKDALAIIKAVGVLRDVERCKDSRHIRAGRGKMR 185
Query: 740 NRRRIXVRGPS*XSXRXRVXRALXKIPG 823
NRR I +GP V R +PG
Sbjct: 186 NRRYITRKGPLVIYNTEDVARGFRNLPG 213
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 124 bits (300), Expect = 2e-27
Identities = 61/108 (56%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Frame = +2
Query: 566 RGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 745
RG++++ + E+PLVV+DK+QEINKTKQAVIFLRR+KAWSD+LKVYKSQRLRAGKGKMRNR
Sbjct: 5 RGYVVDNVSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNR 64
Query: 746 RRIXVRGPS*XSXRXR-VXRALXKIPGWGPVILKTXPX*XWXPXGHFG 886
RR+ +GP + + + R+ IPG V + P GH G
Sbjct: 65 RRLHRKGPLIIYNKDQGLTRSFRNIPGVDMVNVNKLNLLHLAPGGHVG 112
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 121 bits (291), Expect = 3e-26
Identities = 62/180 (34%), Positives = 94/180 (52%), Gaps = 1/180 (0%)
Frame = +2
Query: 218 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 397
LP F+ P+R DL+ ++ N RQPY AG +TSAESWG G VA +PRV+G
Sbjct: 18 LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSAESWGAGHGVAMVPRVKGRR 77
Query: 398 THRSGQGAFGNMCRGG-RMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGH 574
+G+ A GG + APT P + W + RGH
Sbjct: 78 HPAAGRAARVAQAVGGQKAHAPT-PEKDWTQRVNRKERRAALRSALAATAKPEFVKERGH 136
Query: 575 IIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRI 754
+I+ +P LP+VV D+++ +NK ++ F + + W+D+ + ++R+RAGKGK R RR +
Sbjct: 137 VIDDVPHLPVVVVDELKSLNKAREVREFFKSVGLWADVERAKSNRRIRAGKGKRRGRRYV 196
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 112 bits (269), Expect = 1e-23
Identities = 63/176 (35%), Positives = 86/176 (48%)
Frame = +2
Query: 221 PFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 400
P F PIRPDL+ ++S QP V + AG + S ES+G G +ARIPR +G
Sbjct: 45 PLHFLEPIRPDLIRRAYLSALSARFQPKGVYEGAGKEHSCESFGVGLGIARIPRYKGSLW 104
Query: 401 HRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHII 580
R G F RGGR P K ++ H ARGH++
Sbjct: 105 PR---GCFAPNTRGGRRAHPPKVEKKLHEEINKKEKKLAIRSAIAATAYRSWVAARGHVV 161
Query: 581 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRR 748
EK+P LP+VV ++IN+ K+A L W D+ + + ++RAGKGKMR RR
Sbjct: 162 EKVPSLPVVVVGDAEKINRAKEAKKLFEALGLWPDVERAAEGVKIRAGKGKMRGRR 217
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 101 bits (243), Expect = 2e-20
Identities = 78/238 (32%), Positives = 102/238 (42%), Gaps = 10/238 (4%)
Frame = +2
Query: 203 GAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPR 382
GA+ +P VF +PIR D+VN VH ++KN + + + A PR
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKNDSTTDEIQLCFLLDSQGKRTPCTDVPATKPR 74
Query: 383 VRGGGTHRSGQGAFGNMCRGGRMFAPTK---------PWRRWHXXXXXXXXXXXXXXXXX 535
G + +CR AP K WRRWH
Sbjct: 75 PSPGAP--VARSLVFRVCRAVVPTAPVKGRSVTCAAVTWRRWHRRVNIKEKRYAVCSAIA 132
Query: 536 XXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRL 715
ARGH +E +PE+PLVV D I KT +AV L++L A++DI KV S+ +
Sbjct: 133 ASAVPSLLLARGHRVEGVPEVPLVVDDSASSIKKTAKAVELLKQLGAYADIEKVKASRNV 192
Query: 716 RAGKGKMRNRRRIXVRGP-S*XSXRXRVXRALXKIPGWGPVILKTXPX*XWXPXGHFG 886
R+GKGKMRNRR + RGP S V RA IPG + P GH G
Sbjct: 193 RSGKGKMRNRRYVQRRGPLVVYSEDNGVTRAFRNIPGVELCSVDRLGLLTLAPGGHVG 250
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 98.3 bits (234), Expect = 2e-19
Identities = 56/200 (28%), Positives = 97/200 (48%)
Frame = +2
Query: 170 SVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESW 349
+VYS K + + LP +F+ RPD++ +SM QP+ AG +T+AES+
Sbjct: 5 NVYSLKGDITEEIE--LPEIFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAESF 62
Query: 350 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 529
G+GR A +PRV+G S + AF GGR P + +H
Sbjct: 63 GSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPRVNTIYHEKINKKERTLAIRSA 117
Query: 530 XXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQ 709
+ RGH + ++ ++P V+ D+++ + TK+ + L DI++ K +
Sbjct: 118 IAATANKELVEQRGHQVSELEQIPFVIDDEIETVKTTKETREIFKDLGIMDDIVRAKKGR 177
Query: 710 RLRAGKGKMRNRRRIXVRGP 769
++++GKGK+R R+ +GP
Sbjct: 178 KIKSGKGKLRGRKYRTPKGP 197
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 95.1 bits (226), Expect = 2e-18
Identities = 56/184 (30%), Positives = 87/184 (47%)
Frame = +2
Query: 218 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 397
LP +F P+R DL+ V ++ +S QP AG +TSAES+G +AR+PRV+
Sbjct: 25 LPIIFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFGINLGMARVPRVKN-- 82
Query: 398 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 577
SG+ A GGR+ P ++ +ARGH+
Sbjct: 83 ---SGEAALAPNTVGGRLAFPPSVNKKLAEEANVKEKRLAVISALSATADIAFVRARGHV 139
Query: 578 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIX 757
+ P+VV D + + T + FL+++ + D+ +V + R+RAGKGKMR R+
Sbjct: 140 FKDSVRFPIVVTDDIVNLKTTSEVEEFLKKIGVYDDVERVKERIRIRAGKGKMRGRKYKE 199
Query: 758 VRGP 769
GP
Sbjct: 200 PIGP 203
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 90.2 bits (214), Expect = 6e-17
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 1/210 (0%)
Frame = +2
Query: 218 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 397
LP VF RPD++ +++ + RQPY + +G S E+WG G AR+PR + G
Sbjct: 18 LPEVFAEEFRPDIIKRAVLALQSHRRQPYGPNPLSGVDYSWENWGPGHGYARVPRWKLG- 76
Query: 398 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 577
+ GGR P KP R+W + R H+
Sbjct: 77 ----RRAVVVPQAVGGRRAHPPKPERKWAEKINKKEMRKALKSAIAATANEELVRQRSHV 132
Query: 578 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIX 757
E ELP VV+++++ + +TK R + ++D+ + + +R RAG+GKMR RR +
Sbjct: 133 FE--GELPKVVSNELESVKRTKDVAEVFRAIGVYADVERAKERKRYRAGRGKMRGRRYVK 190
Query: 758 VRGPS*XSXR-XRVXRALXKIPGWGPVILK 844
+ + V +A +PG V++K
Sbjct: 191 KKSVLLVVGKDDGVVKAAKNLPGVDAVVVK 220
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 88.6 bits (210), Expect = 2e-16
Identities = 39/60 (65%), Positives = 51/60 (85%)
Frame = +2
Query: 563 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 742
++GH I ++PELPLVV DKV+ KT++AV+ L++LKAW+DI KVY SQR+RAGKGKMRN
Sbjct: 2 SKGHRIGEVPELPLVVEDKVEGYKKTEEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 61
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 87.0 bits (206), Expect = 6e-16
Identities = 41/133 (30%), Positives = 67/133 (50%)
Frame = +2
Query: 320 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 499
+G+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 59 SGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWNIKTNR 118
Query: 500 XXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAW 679
+RGH ++ + P+++ ++ I + ++ L+ +
Sbjct: 119 KVKVSAFKTALLSTLFETLVVSRGHSLKDVKNFPMIIDSILKYIWHPSELLMLLKLYGGY 178
Query: 680 SDILKVYKSQRLR 718
SD K S R
Sbjct: 179 SDFKKAMISHAKR 191
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 79.8 bits (188), Expect = 9e-14
Identities = 54/184 (29%), Positives = 82/184 (44%), Gaps = 2/184 (1%)
Frame = +2
Query: 200 QGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG--TGRAVAR 373
+G LP VF P R DL+ + + + QP AG SA+S TG AR
Sbjct: 12 KGKEITLPPVFGTPYRRDLIKKAYTILDTHHFQPKGTHPTAGMDVSADSLNPPTGHGQAR 71
Query: 374 IPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXX 553
I R++GGG R G+ RGGR P K + H
Sbjct: 72 IARMKGGGGRRRGEAGEVASIRGGRQAHPPKVQKVIHKKINKKEKKLALCSAIAATASKS 131
Query: 554 XXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGK 733
RGHII+ I ELP+V++D ++ ++K + L L ++D+ ++ + ++ R GK
Sbjct: 132 TVAGRGHIIDGI-ELPIVISDDIESVSKASEVRKILSALGLFADVNRL-EGRKPRTGKSA 189
Query: 734 MRNR 745
+R R
Sbjct: 190 LRGR 193
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 79.8 bits (188), Expect = 9e-14
Identities = 54/202 (26%), Positives = 88/202 (43%)
Frame = +2
Query: 218 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 397
LP VF +R D++ ++S + RQPY S AG + + G ++R+PR+ GG
Sbjct: 20 LPEVFDTEVREDIIRRAFRAISLSMRQPYGSSPLAGMRRVGHTTRPGLGISRMPRIAGGS 79
Query: 398 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 577
A G G+ + + + + RGH
Sbjct: 80 RVVGIASAVG-----GKSAHSPRTTKNLYVKINDRERKMAKYSAIALTASVEAVKKRGHR 134
Query: 578 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIX 757
++ +LP+VV D V+ INKTK A+ L+ L + DI + + + +RAG+GKMR RR
Sbjct: 135 FKEGLKLPIVVEDGVEGINKTKDAIALLKNLGVYEDIERSREGKHIRAGRGKMRGRRYKQ 194
Query: 758 VRGPS*XSXRXRVXRALXKIPG 823
+ + +A +PG
Sbjct: 195 PKSVLIVARNSSAMKAFRSLPG 216
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 79.8 bits (188), Expect = 9e-14
Identities = 56/178 (31%), Positives = 81/178 (45%), Gaps = 1/178 (0%)
Frame = +2
Query: 218 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 397
LP +F+ P+R DL+ +S QP AG +TSA S G GR VAR+PR++G
Sbjct: 31 LPQIFRFPVRKDLIRRAFLSEFTARLQPKGRDPMAGKRTSAVSLGVGRGVARVPRIKG-- 88
Query: 398 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 577
S + A NM RGGR P + + + RGH
Sbjct: 89 ---SLRAALVNMARGGRAAHPPRVEKVLKEYINKKEKRLATISAISATSREDLVRQRGHR 145
Query: 578 IEKIPELPLVVADKV-QEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRR 748
LP+V+ V +I+ ++A L + + D+L+ + +R AGKGKMR RR
Sbjct: 146 F-SAETLPIVLDSSVLAKISTAREARSLLESVGVYEDVLRAKEGKRYNAGKGKMRGRR 202
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 74.5 bits (175), Expect = 3e-12
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +2
Query: 251 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 397
D+VN VH ++ KN QPY VS+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTSAESWGTGRARGPMPRVRGGG 73
Score = 71.7 bits (168), Expect = 2e-11
Identities = 33/50 (66%), Positives = 40/50 (80%)
Frame = +2
Query: 617 KVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIXVRG 766
KV+ KTK+ V+ L++LKAW+DI KVY SQR+RAGKGKMRNRR I RG
Sbjct: 98 KVEGYKKTKEEVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRPIQRRG 147
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 72.9 bits (171), Expect = 1e-11
Identities = 41/110 (37%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Frame = +2
Query: 563 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 742
ARGH IE +PELPLV+ D + + KT A+ L++ A+ D K S + GKGKMRN
Sbjct: 2 ARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQFDAYLDTEKAKDSHAIHPGKGKMRN 61
Query: 743 RRRIXVRGP--S*XSXRXRVXRALXKIPGWGPVILKTXPX*XWXPXGHFG 886
RR I +GP ++ +A IPG + P GH G
Sbjct: 62 RRYISRKGPLIVYGMEGAKLVKAFRNIPGVEVANVDRLNLLKLAPGGHLG 111
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 69.3 bits (162), Expect = 1e-10
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 13/215 (6%)
Frame = +2
Query: 218 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA------ESWGT--GRAVAR 373
LP F IR D++ +++ + RQPY S AG Q SA SW T GR ++R
Sbjct: 18 LPPQFNEKIRFDVIKRAFLAIQSHKRQPYGASPIAGKQHSAWTSKRRRSWRTSYGRGISR 77
Query: 374 IPRV---RGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXX 544
+ R R G +G + P K + W+
Sbjct: 78 VSRAILRRHGALFYWVARNIAQAVKGKKAHPP-KAEKDWYEKINKKERRLAIRSALAATK 136
Query: 545 XXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAG 724
+ARGHII+K +P+VV D ++++ KTK+ L +L ++ +VY+ +R RAG
Sbjct: 137 ELDLVKARGHIIDK--PVPIVV-DGLEQLRKTKEIQQLLLKLGLEKELERVYEIKR-RAG 192
Query: 725 KGKMRNRRRIXVRGP--S*XSXRXRVXRALXKIPG 823
KGK R R I +GP ++ +A+ IPG
Sbjct: 193 KGKRRGRAYIERKGPLIVVNDYNEQLFKAVDNIPG 227
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 65.7 bits (153), Expect = 2e-09
Identities = 49/177 (27%), Positives = 81/177 (45%)
Frame = +2
Query: 218 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 397
LP VF+ P+R DL+ + N +Q Y + AG +T AES+G+GR A +P+ + G
Sbjct: 18 LPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPK-QDGR 76
Query: 398 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 577
R Q GR P K + RGH
Sbjct: 77 ARRVPQAV------KGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHE 130
Query: 578 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRR 748
++ E+P+VV+D +++ KT++ V L L +DI + ++ +++AG+G R R+
Sbjct: 131 FDR-DEVPVVVSDDFEDLVKTQEVVSLLEALDVHADIDRADET-KIKAGQGSARGRK 185
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 51.6 bits (118), Expect = 3e-05
Identities = 65/255 (25%), Positives = 91/255 (35%), Gaps = 23/255 (9%)
Frame = +2
Query: 191 ETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK-------EAGHQTSAESW 349
E G A LP VF IR DL+ ++ N RQ Y + +AG + S E W
Sbjct: 41 EAKNGKAVTLPDVFSGEIREDLIRRAVLASRANRRQSYGHREHDGKRKPQAGMKHSVEWW 100
Query: 350 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 529
G GR V+RI R G T A RGGR K + W
Sbjct: 101 GKGRGVSRIMRKAGQRT-----AAQNPHTRGGRRAHGPKVDKDWSQKINSKENRIARDSA 155
Query: 530 XXXXXXXXXXQARGHIIEKIPELPLVV---------ADKVQEIN------KTKQAVIFLR 664
RGH E P+++ D+ ++ T++ V +
Sbjct: 156 IAASASSNLVSERGHHFEASLRFPIIIDGYVESREGGDEKYDLESLPLQYSTRKFVAMME 215
Query: 665 RLKAWSDILKVYKSQRLRAGKGKMRNRR-RIXVRGPS*XSXRXRVXRALXKIPGWGPVIL 841
L +D+ + + +RAGKG MR R+ R S + +A IPG V+
Sbjct: 216 GLGLGADLDRARTGRTIRAGKGTMRGRKYRTPKSILLVVSQTNGLAKAARNIPGVDIVVA 275
Query: 842 KTXPX*XWXPXGHFG 886
K P G G
Sbjct: 276 KDLSAEDLAPGGDAG 290
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 47.2 bits (107), Expect = 6e-04
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +2
Query: 608 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIXVRGP--S*XS 781
V DK++ KTK A+ FL+R A+ D+ KV ++ +RAG K R ++ +GP +
Sbjct: 1 VEDKIESYEKTKDALNFLKRFGAFEDVQKVVSTKTIRAGVSKSRGKKYRVRKGPLVVYFN 60
Query: 782 XRXRVXRALXKIPG 823
++ +A +PG
Sbjct: 61 ENAKLLKAFRNVPG 74
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 47.2 bits (107), Expect = 6e-04
Identities = 38/119 (31%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
Frame = +1
Query: 394 WYP*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPAAESGLGSSRCCYRRPSARSG*RT 573
W VR C+R HV WW +VR E L LAP QP A L C R A +G
Sbjct: 134 WNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP--APEALRCGVCARRVVCAVAGDVA 191
Query: 574 HY*KDSRA--SLGCS*QSPGDQQDQTGCHLPEAPQGMV*YP*GVQVSASSCW*G*NAQP 744
RA + G PG ++D+ G +PE + +++ CW +AQP
Sbjct: 192 RPPDRQRAGGAAGGGGLDPGLREDEGGYGVPEGDRCDRRREPRERLARDPCWPRQDAQP 250
>UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_113, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 145
Score = 41.9 bits (94), Expect = 0.021
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +2
Query: 563 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 694
ARGH IE + ELPLV+ D + ++KT + L+++ A D+ K
Sbjct: 24 ARGHRIESVLELPLVIGDSTKSVDKTSTTIDILKQVGACPDVEK 67
>UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_48, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 131
Score = 37.9 bits (84), Expect = 0.35
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -3
Query: 462 VGANIRPPRHMLPKAP*P 409
VGANI PPRHMLPKAP P
Sbjct: 107 VGANILPPRHMLPKAPWP 124
>UniRef50_Q9VDD2 Cluster: CG17299-PF, isoform F; n=18; Diptera|Rep:
CG17299-PF, isoform F - Drosophila melanogaster (Fruit
fly)
Length = 1400
Score = 35.9 bits (79), Expect = 1.4
Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = +2
Query: 194 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 367
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 670 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 728
Query: 368 ARIPRVRGGGTHRSGQGAFGNMCRGGRM 451
+ GG +GQGA G GG M
Sbjct: 729 SSAAGGAGGAAAAAGQGAAGG--AGGLM 754
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 1.9
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +2
Query: 368 ARIPRVRGGGTHRSGQGAFGNMCRGG 445
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein
DKFZp434E026; n=1; Homo sapiens|Rep: Putative
uncharacterized protein DKFZp434E026 - Homo sapiens
(Human)
Length = 158
Score = 34.3 bits (75), Expect = 4.3
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = -2
Query: 565 SLNERWDAGSSNGCCQGRSPLPEVDATVPAPPGL 464
+L +W S+G C G SPL A PAPPGL
Sbjct: 106 ALPGKWHLLLSSGLCGGNSPLSGNGAVCPAPPGL 139
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 33.9 bits (74), Expect = 5.7
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +2
Query: 338 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 448
A+SW TGRA A + R R GG R A N G R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_A2QMQ0 Cluster: Contig An07c0080, complete genome; n=11;
Pezizomycotina|Rep: Contig An07c0080, complete genome -
Aspergillus niger
Length = 598
Score = 33.9 bits (74), Expect = 5.7
Identities = 20/72 (27%), Positives = 32/72 (44%)
Frame = -2
Query: 694 LKDIRPCLEAPQEDDSLFGLVDLLDFVSYNQGKLGNLFNNVSSSLNERWDAGSSNGCCQG 515
++ + PC+ A D F L L+F S N + F+ ++ +E G++NG QG
Sbjct: 282 IQSVDPCISAQVAQDHTFAL---LEFKSPNDATVALAFDGIAMEEHEAAGNGAANGAAQG 338
Query: 514 RSPLPEVDATVP 479
D VP
Sbjct: 339 LEVRRPKDYIVP 350
>UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;
Poaceae|Rep: Golden2-like transcription factor - Zea
mays (Maize)
Length = 469
Score = 33.5 bits (73), Expect = 7.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 441 PRHMLPKAP*PDLWVPPPR 385
PRH+ P+AP P W PPP+
Sbjct: 325 PRHLAPRAPPPPPWAPPPQ 343
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 851,427,018
Number of Sequences: 1657284
Number of extensions: 17087469
Number of successful extensions: 48978
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 46347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48914
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81571813589
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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