Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_F04
(899 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 272 3e-73
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 272 3e-73
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 272 3e-73
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 269 3e-72
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 173 2e-43
BT010233-1|AAQ23551.1| 947|Drosophila melanogaster RE59472p pro... 36 0.076
BT003626-1|AAO39629.1| 947|Drosophila melanogaster GH01416p pro... 36 0.076
AY166752-1|AAN85714.1| 1400|Drosophila melanogaster loechrig iso... 36 0.076
AY070541-1|AAL48012.1| 1400|Drosophila melanogaster LD22662p pro... 36 0.076
AE014297-2948|AAF55864.2| 1400|Drosophila melanogaster CG17299-P... 36 0.076
AE014297-2944|AAF55860.2| 947|Drosophila melanogaster CG17299-P... 36 0.076
AE014297-2943|AAN13851.1| 947|Drosophila melanogaster CG17299-P... 36 0.076
AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p pro... 31 2.8
AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-P... 31 2.8
AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 31 2.8
BT010242-1|AAQ23560.1| 498|Drosophila melanogaster RE48016p pro... 29 8.7
AY071142-1|AAL48764.1| 572|Drosophila melanogaster RE17942p pro... 29 8.7
AF223064-1|AAF34687.1| 571|Drosophila melanogaster putative mic... 29 8.7
AE014297-195|AAF52059.2| 572|Drosophila melanogaster CG10229-PA... 29 8.7
AE013599-2858|AAF57577.1| 537|Drosophila melanogaster CG9811-PA... 29 8.7
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 272 bits (668), Expect = 3e-73
Identities = 136/240 (56%), Positives = 163/240 (67%), Gaps = 1/240 (0%)
Frame = +2
Query: 170 SVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESW 349
SVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+ AGHQTSAESW
Sbjct: 11 SVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESW 70
Query: 350 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 529
GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 71 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSA 130
Query: 530 XXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQ 709
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQ
Sbjct: 131 IAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQ 190
Query: 710 RLRAGKGKMRNRRRIXVRGPS*XSXRXR-VXRALXKIPGWGPVILKTXPX*XWXPXGHFG 886
R RAG+G MR+RRRI RGP + + +A IPG + + P GH G
Sbjct: 191 RFRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVDKLNVLKLAPGGHVG 250
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 272 bits (668), Expect = 3e-73
Identities = 136/240 (56%), Positives = 163/240 (67%), Gaps = 1/240 (0%)
Frame = +2
Query: 170 SVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESW 349
SVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+ AGHQTSAESW
Sbjct: 11 SVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESW 70
Query: 350 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 529
GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 71 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSA 130
Query: 530 XXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQ 709
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQ
Sbjct: 131 IAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQ 190
Query: 710 RLRAGKGKMRNRRRIXVRGPS*XSXRXR-VXRALXKIPGWGPVILKTXPX*XWXPXGHFG 886
R RAG+G MR+RRRI RGP + + +A IPG + + P GH G
Sbjct: 191 RFRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVG 250
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 272 bits (668), Expect = 3e-73
Identities = 136/240 (56%), Positives = 163/240 (67%), Gaps = 1/240 (0%)
Frame = +2
Query: 170 SVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESW 349
SVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+ AGHQTSAESW
Sbjct: 11 SVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESW 70
Query: 350 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 529
GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 71 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSA 130
Query: 530 XXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQ 709
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQ
Sbjct: 131 IAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQ 190
Query: 710 RLRAGKGKMRNRRRIXVRGPS*XSXRXR-VXRALXKIPGWGPVILKTXPX*XWXPXGHFG 886
R RAG+G MR+RRRI RGP + + +A IPG + + P GH G
Sbjct: 191 RFRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVG 250
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 269 bits (660), Expect = 3e-72
Identities = 128/200 (64%), Positives = 150/200 (75%)
Frame = +2
Query: 170 SVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESW 349
SVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+ AGHQTSAESW
Sbjct: 11 SVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESW 70
Query: 350 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 529
GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 71 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSA 130
Query: 530 XXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQ 709
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQ
Sbjct: 131 IAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQ 190
Query: 710 RLRAGKGKMRNRRRIXVRGP 769
R RAG+G MR+RRRI RGP
Sbjct: 191 RFRAGRGTMRDRRRIARRGP 210
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 173 bits (422), Expect = 2e-43
Identities = 80/123 (65%), Positives = 91/123 (73%)
Frame = +2
Query: 326 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 505
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 1 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRRVNVNQ 60
Query: 506 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 685
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+D
Sbjct: 61 RRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWAD 120
Query: 686 ILK 694
I K
Sbjct: 121 IQK 123
>BT010233-1|AAQ23551.1| 947|Drosophila melanogaster RE59472p
protein.
Length = 947
Score = 35.9 bits (79), Expect = 0.076
Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = +2
Query: 194 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 367
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 217 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 275
Query: 368 ARIPRVRGGGTHRSGQGAFGNMCRGGRM 451
+ GG +GQGA G GG M
Sbjct: 276 SSAAGGAGGAAAAAGQGAAGG--AGGLM 301
>BT003626-1|AAO39629.1| 947|Drosophila melanogaster GH01416p
protein.
Length = 947
Score = 35.9 bits (79), Expect = 0.076
Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = +2
Query: 194 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 367
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 217 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 275
Query: 368 ARIPRVRGGGTHRSGQGAFGNMCRGGRM 451
+ GG +GQGA G GG M
Sbjct: 276 SSAAGGAGGAAAAAGQGAAGG--AGGLM 301
>AY166752-1|AAN85714.1| 1400|Drosophila melanogaster loechrig
isoform I protein.
Length = 1400
Score = 35.9 bits (79), Expect = 0.076
Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = +2
Query: 194 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 367
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 670 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 728
Query: 368 ARIPRVRGGGTHRSGQGAFGNMCRGGRM 451
+ GG +GQGA G GG M
Sbjct: 729 SSAAGGAGGAAAAAGQGAAGG--AGGLM 754
>AY070541-1|AAL48012.1| 1400|Drosophila melanogaster LD22662p
protein.
Length = 1400
Score = 35.9 bits (79), Expect = 0.076
Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = +2
Query: 194 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 367
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 670 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 728
Query: 368 ARIPRVRGGGTHRSGQGAFGNMCRGGRM 451
+ GG +GQGA G GG M
Sbjct: 729 SSAAGGAGGAAAAAGQGAAGG--AGGLM 754
>AE014297-2948|AAF55864.2| 1400|Drosophila melanogaster CG17299-PF,
isoform F protein.
Length = 1400
Score = 35.9 bits (79), Expect = 0.076
Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = +2
Query: 194 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 367
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 670 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 728
Query: 368 ARIPRVRGGGTHRSGQGAFGNMCRGGRM 451
+ GG +GQGA G GG M
Sbjct: 729 SSAAGGAGGAAAAAGQGAAGG--AGGLM 754
>AE014297-2944|AAF55860.2| 947|Drosophila melanogaster CG17299-PB,
isoform B protein.
Length = 947
Score = 35.9 bits (79), Expect = 0.076
Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = +2
Query: 194 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 367
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 217 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 275
Query: 368 ARIPRVRGGGTHRSGQGAFGNMCRGGRM 451
+ GG +GQGA G GG M
Sbjct: 276 SSAAGGAGGAAAAAGQGAAGG--AGGLM 301
>AE014297-2943|AAN13851.1| 947|Drosophila melanogaster CG17299-PA,
isoform A protein.
Length = 947
Score = 35.9 bits (79), Expect = 0.076
Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = +2
Query: 194 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 367
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 217 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 275
Query: 368 ARIPRVRGGGTHRSGQGAFGNMCRGGRM 451
+ GG +GQGA G GG M
Sbjct: 276 SSAAGGAGGAAAAAGQGAAGG--AGGLM 301
>AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p
protein.
Length = 872
Score = 30.7 bits (66), Expect = 2.8
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 358 TCCRPNSS-CPWWWYP*VRSGC 420
TCC P S+ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-PB,
isoform B protein.
Length = 271
Score = 30.7 bits (66), Expect = 2.8
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 358 TCCRPNSS-CPWWWYP*VRSGC 420
TCC P S+ CPW WY +GC
Sbjct: 117 TCCMPCSNQCPWSWYYNPCTGC 138
>AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA,
isoform A protein.
Length = 872
Score = 30.7 bits (66), Expect = 2.8
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 358 TCCRPNSS-CPWWWYP*VRSGC 420
TCC P S+ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>BT010242-1|AAQ23560.1| 498|Drosophila melanogaster RE48016p
protein.
Length = 498
Score = 29.1 bits (62), Expect = 8.7
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -2
Query: 655 DDSLFGLVDLLDFVSYNQGKLGNLFNNVSSSLNERWDAGSSN-GCCQGRSPLPEVDATVP 479
D+ L GL+ + N K +LF S ++R N GC +PL + V
Sbjct: 392 DELLVGLLSQIRLKLENPEKSRDLFRKRSIRKSKRRACSPLNAGCLNANTPLGPLGEAVA 451
Query: 478 APPG 467
PPG
Sbjct: 452 TPPG 455
>AY071142-1|AAL48764.1| 572|Drosophila melanogaster RE17942p
protein.
Length = 572
Score = 29.1 bits (62), Expect = 8.7
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 417 P*PDLWVPPPRTRGIRATARPVPHDSAL 334
P PD+W PPP+ + +P P A+
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160
>AF223064-1|AAF34687.1| 571|Drosophila melanogaster putative
microtubule severingprotein katanin p60 subunit protein.
Length = 571
Score = 29.1 bits (62), Expect = 8.7
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 417 P*PDLWVPPPRTRGIRATARPVPHDSAL 334
P PD+W PPP+ + +P P A+
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160
>AE014297-195|AAF52059.2| 572|Drosophila melanogaster CG10229-PA
protein.
Length = 572
Score = 29.1 bits (62), Expect = 8.7
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 417 P*PDLWVPPPRTRGIRATARPVPHDSAL 334
P PD+W PPP+ + +P P A+
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160
>AE013599-2858|AAF57577.1| 537|Drosophila melanogaster CG9811-PA
protein.
Length = 537
Score = 29.1 bits (62), Expect = 8.7
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -2
Query: 655 DDSLFGLVDLLDFVSYNQGKLGNLFNNVSSSLNERWDAGSSN-GCCQGRSPLPEVDATVP 479
D+ L GL+ + N K +LF S ++R N GC +PL + V
Sbjct: 431 DELLVGLLSQIRLKLENPEKSRDLFRKRSIRKSKRRACSPLNAGCLNANTPLGPLGEAVA 490
Query: 478 APPG 467
PPG
Sbjct: 491 TPPG 494
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,681,571
Number of Sequences: 53049
Number of extensions: 822261
Number of successful extensions: 2375
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2363
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4382549442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -