Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_E19
(898 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X97668-1|CAA66258.1| 815|Homo sapiens XLRP3 protein. 41 0.005
U57629-1|AAC50481.1| 815|Homo sapiens retinitis pigmentosa GTPa... 41 0.005
BC031624-1|AAH31624.1| 480|Homo sapiens RPGR protein protein. 41 0.005
AL606748-2|CAI95407.1| 815|Homo sapiens retinitis pigmentosa GT... 41 0.005
AK223491-1|BAD97211.1| 815|Homo sapiens retinitis pigmentosa GT... 41 0.005
AJ318463-1|CAC86116.1| 815|Homo sapiens retinitis pigmentosa GT... 41 0.005
AJ238395-1|CAB54002.1| 646|Homo sapiens RPGR protein protein. 41 0.005
U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein. 38 0.037
BC029052-1|AAH29052.1| 551|Homo sapiens regulator of chromosome... 36 0.20
AY341245-1|AAP88928.1| 551|Homo sapiens chromosome condensation... 36 0.20
AL157813-1|CAH70795.1| 551|Homo sapiens regulator of chromosome... 36 0.20
AF060219-1|AAC79987.1| 551|Homo sapiens RCC1-like G exchanging ... 36 0.20
AB209543-1|BAD92780.1| 556|Homo sapiens RCC1-like G exchanging ... 36 0.20
BC038104-1|AAH38104.1| 355|Homo sapiens RCBTB1 protein protein. 33 1.1
AL162393-4|CAI15243.1| 954|Homo sapiens zinc finger protein 618... 33 1.1
AL162393-3|CAI15242.1| 375|Homo sapiens zinc finger protein 618... 33 1.1
AL139321-5|CAH71047.1| 531|Homo sapiens regulator of chromosome... 33 1.1
AL137850-3|CAI15898.1| 954|Homo sapiens zinc finger protein 618... 33 1.1
AL137850-2|CAI15897.1| 375|Homo sapiens zinc finger protein 618... 33 1.1
AK096654-1|BAC04833.1| 531|Homo sapiens protein ( Homo sapiens ... 33 1.1
AJ319660-1|CAC40027.1| 531|Homo sapiens guanine nucleotide exch... 33 1.1
AF334406-1|AAK38372.1| 531|Homo sapiens CLLL7 protein protein. 33 1.1
AB075832-1|BAB85538.1| 735|Homo sapiens KIAA1952 protein protein. 33 1.1
AF225407-1|AAO27483.1| 409|Homo sapiens HERC2 protein. 33 1.4
AF071172-1|AAD08657.1| 4834|Homo sapiens HERC2 protein. 33 1.4
J05213-1|AAC95490.1| 317|Homo sapiens sialoprotein precursor pr... 33 1.9
BC042047-1|AAH42047.2| 1022|Homo sapiens hect domain and RLD 6 p... 33 1.9
AY653203-1|AAV66897.1| 322|Homo sapiens truncated HERC6 protein. 33 1.9
AY653202-1|AAV66896.1| 364|Homo sapiens truncated HERC6 protein. 33 1.9
AY653201-1|AAV66895.1| 986|Homo sapiens HERC6 splice variant pr... 33 1.9
AK092403-1|BAC03879.1| 184|Homo sapiens protein ( Homo sapiens ... 33 1.9
AF336798-1|AAQ14893.1| 1022|Homo sapiens HERC6 protein. 33 1.9
L24759-1|AAC37560.1| 317|Homo sapiens bone sialoprotein protein. 32 2.5
L09558-1|AAA60549.1| 317|Homo sapiens bone sialoprotein protein. 32 2.5
D25215-1|BAA04945.2| 1054|Homo sapiens KIAA0032 protein. 32 2.5
BC038960-1|AAH38960.1| 368|Homo sapiens HERC3 protein protein. 32 2.5
AY337518-1|AAR00320.1| 1024|Homo sapiens HECT E3 ubiquitin ligas... 32 2.5
AC098582-1|AAY41038.1| 382|Homo sapiens unknown protein. 32 2.5
AB027289-1|BAA88519.1| 1024|Homo sapiens cyclin-E binding protei... 32 2.5
L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein. 30 9.9
BC131742-1|AAI31743.1| 314|Homo sapiens taste receptor, type 2,... 30 9.9
AK057516-1|BAB71517.1| 573|Homo sapiens protein ( Homo sapiens ... 30 9.9
AC016689-1|AAX88865.1| 571|Homo sapiens unknown protein. 30 9.9
AB199242-1|BAD98114.1| 297|Homo sapiens bitter taste receptor T... 30 9.9
>X97668-1|CAA66258.1| 815|Homo sapiens XLRP3 protein.
Length = 815
Score = 41.1 bits (92), Expect = 0.005
Identities = 25/63 (39%), Positives = 32/63 (50%)
Frame = +3
Query: 96 ISDNGLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACGGCHTL 275
I+D GL+YT G+ RH KL L E N + P + IV VACGGCH +
Sbjct: 310 ITDIGLMYTFGDGRHGKLGL-------GLENFTNHFIPTLCSNFLRFIVKLVACGGCHMV 362
Query: 276 LTA 284
+ A
Sbjct: 363 VFA 365
Score = 32.7 bits (71), Expect = 1.9
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +3
Query: 96 ISDNGLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACGGCHTL 275
++ +G LY GE + KL L N+++ N TP+ V+ + ++ VACGG HT+
Sbjct: 205 VTTDGELYVFGEPENGKLGLP-------NQLLGNHRTPQLVSEIPEKVIQ-VACGGEHTV 256
Query: 276 L 278
+
Sbjct: 257 V 257
>U57629-1|AAC50481.1| 815|Homo sapiens retinitis pigmentosa GTPase
regulator protein.
Length = 815
Score = 41.1 bits (92), Expect = 0.005
Identities = 25/63 (39%), Positives = 32/63 (50%)
Frame = +3
Query: 96 ISDNGLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACGGCHTL 275
I+D GL+YT G+ RH KL L E N + P + IV VACGGCH +
Sbjct: 310 ITDIGLMYTFGDGRHGKLGL-------GLENFTNHFIPTLCSNFLRFIVKLVACGGCHMV 362
Query: 276 LTA 284
+ A
Sbjct: 363 VFA 365
Score = 32.7 bits (71), Expect = 1.9
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +3
Query: 96 ISDNGLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACGGCHTL 275
++ +G LY GE + KL L N+++ N TP+ V+ + ++ VACGG HT+
Sbjct: 205 VTTDGELYVFGEPENGKLGLP-------NQLLGNHRTPQLVSEIPEKVIQ-VACGGEHTV 256
Query: 276 L 278
+
Sbjct: 257 V 257
>BC031624-1|AAH31624.1| 480|Homo sapiens RPGR protein protein.
Length = 480
Score = 41.1 bits (92), Expect = 0.005
Identities = 25/63 (39%), Positives = 32/63 (50%)
Frame = +3
Query: 96 ISDNGLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACGGCHTL 275
I+D GL+YT G+ RH KL L E N + P + IV VACGGCH +
Sbjct: 310 ITDIGLMYTFGDGRHGKLGL-------GLENFTNHFIPTLCSNFLRFIVKLVACGGCHMV 362
Query: 276 LTA 284
+ A
Sbjct: 363 VFA 365
Score = 32.7 bits (71), Expect = 1.9
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +3
Query: 96 ISDNGLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACGGCHTL 275
++ +G LY GE + KL L N+++ N TP+ V+ + ++ VACGG HT+
Sbjct: 205 VTTDGELYVFGEPENGKLGLP-------NQLLGNHRTPQLVSEIPEKVIQ-VACGGEHTV 256
Query: 276 L 278
+
Sbjct: 257 V 257
>AL606748-2|CAI95407.1| 815|Homo sapiens retinitis pigmentosa
GTPase regulator protein.
Length = 815
Score = 41.1 bits (92), Expect = 0.005
Identities = 25/63 (39%), Positives = 32/63 (50%)
Frame = +3
Query: 96 ISDNGLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACGGCHTL 275
I+D GL+YT G+ RH KL L E N + P + IV VACGGCH +
Sbjct: 310 ITDIGLMYTFGDGRHGKLGL-------GLENFTNHFIPTLCSNFLRFIVKLVACGGCHMV 362
Query: 276 LTA 284
+ A
Sbjct: 363 VFA 365
Score = 32.7 bits (71), Expect = 1.9
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +3
Query: 96 ISDNGLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACGGCHTL 275
++ +G LY GE + KL L N+++ N TP+ V+ + ++ VACGG HT+
Sbjct: 205 VTTDGELYVFGEPENGKLGLP-------NQLLGNHRTPQLVSEIPEKVIQ-VACGGEHTV 256
Query: 276 L 278
+
Sbjct: 257 V 257
>AK223491-1|BAD97211.1| 815|Homo sapiens retinitis pigmentosa
GTPase regulator variant protein.
Length = 815
Score = 41.1 bits (92), Expect = 0.005
Identities = 25/63 (39%), Positives = 32/63 (50%)
Frame = +3
Query: 96 ISDNGLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACGGCHTL 275
I+D GL+YT G+ RH KL L E N + P + IV VACGGCH +
Sbjct: 310 ITDIGLMYTFGDGRHGKLGL-------GLENFTNHFIPTLCSNFLRFIVKLVACGGCHMV 362
Query: 276 LTA 284
+ A
Sbjct: 363 VFA 365
Score = 32.7 bits (71), Expect = 1.9
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +3
Query: 96 ISDNGLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACGGCHTL 275
++ +G LY GE + KL L N+++ N TP+ V+ + ++ VACGG HT+
Sbjct: 205 VTTDGELYVFGEPENGKLGLP-------NQLLGNHRTPQLVSEIPEKVIQ-VACGGEHTV 256
Query: 276 L 278
+
Sbjct: 257 V 257
>AJ318463-1|CAC86116.1| 815|Homo sapiens retinitis pigmentosa
GTPase regulator protein.
Length = 815
Score = 41.1 bits (92), Expect = 0.005
Identities = 25/63 (39%), Positives = 32/63 (50%)
Frame = +3
Query: 96 ISDNGLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACGGCHTL 275
I+D GL+YT G+ RH KL L E N + P + IV VACGGCH +
Sbjct: 310 ITDIGLMYTFGDGRHGKLGL-------GLENFTNHFIPTLCSNFLRFIVKLVACGGCHMV 362
Query: 276 LTA 284
+ A
Sbjct: 363 VFA 365
Score = 32.7 bits (71), Expect = 1.9
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +3
Query: 96 ISDNGLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACGGCHTL 275
++ +G LY GE + KL L N+++ N TP+ V+ + ++ VACGG HT+
Sbjct: 205 VTTDGELYVFGEPENGKLGLP-------NQLLGNHRTPQLVSEIPEKVIQ-VACGGEHTV 256
Query: 276 L 278
+
Sbjct: 257 V 257
>AJ238395-1|CAB54002.1| 646|Homo sapiens RPGR protein protein.
Length = 646
Score = 41.1 bits (92), Expect = 0.005
Identities = 25/63 (39%), Positives = 32/63 (50%)
Frame = +3
Query: 96 ISDNGLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACGGCHTL 275
I+D GL+YT G+ RH KL L E N + P + IV VACGGCH +
Sbjct: 310 ITDIGLMYTFGDGRHGKLGL-------GLENFTNHFIPTLCSNFLRFIVKLVACGGCHMV 362
Query: 276 LTA 284
+ A
Sbjct: 363 VFA 365
Score = 32.7 bits (71), Expect = 1.9
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +3
Query: 96 ISDNGLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACGGCHTL 275
++ +G LY GE + KL L N+++ N TP+ V+ + ++ VACGG HT+
Sbjct: 205 VTTDGELYVFGEPENGKLGLP-------NQLLGNHRTPQLVSEIPEKVIQ-VACGGEHTV 256
Query: 276 L 278
+
Sbjct: 257 V 257
>U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein.
Length = 4861
Score = 38.3 bits (85), Expect = 0.037
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = +3
Query: 96 ISDNGLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACGGCHTL 275
++ +G L+T G + +L L + N+ P+RVTA+ G+ + VACG HTL
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTS---------NKKLPERVTALEGYQIGQVACGLNHTL 4199
Query: 276 LTATKGS 296
+ GS
Sbjct: 4200 AVSADGS 4206
>BC029052-1|AAH29052.1| 551|Homo sapiens regulator of chromosome
condensation (RCC1) and BTB (POZ) domain containing pro
protein.
Length = 551
Score = 35.9 bits (79), Expect = 0.20
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +3
Query: 195 NQYTPKRVTAMNGHIVDNVACGGCHTLLTATKG 293
NQ TP RV A+ G V VACG HTL+ +G
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 276
>AY341245-1|AAP88928.1| 551|Homo sapiens chromosome condensation
1-like protein.
Length = 551
Score = 35.9 bits (79), Expect = 0.20
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +3
Query: 195 NQYTPKRVTAMNGHIVDNVACGGCHTLLTATKG 293
NQ TP RV A+ G V VACG HTL+ +G
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 276
>AL157813-1|CAH70795.1| 551|Homo sapiens regulator of chromosome
condensation (RCC1) and BTB (POZ) domain containing pro
protein.
Length = 551
Score = 35.9 bits (79), Expect = 0.20
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +3
Query: 195 NQYTPKRVTAMNGHIVDNVACGGCHTLLTATKG 293
NQ TP RV A+ G V VACG HTL+ +G
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 276
>AF060219-1|AAC79987.1| 551|Homo sapiens RCC1-like G exchanging
factor RLG protein.
Length = 551
Score = 35.9 bits (79), Expect = 0.20
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +3
Query: 195 NQYTPKRVTAMNGHIVDNVACGGCHTLLTATKG 293
NQ TP RV A+ G V VACG HTL+ +G
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 276
>AB209543-1|BAD92780.1| 556|Homo sapiens RCC1-like G exchanging
factor RLG variant protein.
Length = 556
Score = 35.9 bits (79), Expect = 0.20
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +3
Query: 195 NQYTPKRVTAMNGHIVDNVACGGCHTLLTATKG 293
NQ TP RV A+ G V VACG HTL+ +G
Sbjct: 249 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 281
>BC038104-1|AAH38104.1| 355|Homo sapiens RCBTB1 protein protein.
Length = 355
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 195 NQYTPKRVTAMNGHIVDNVACGGCHTLLTATKG 293
NQ TP RV A++ V+ + CG HTL +G
Sbjct: 220 NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEG 252
>AL162393-4|CAI15243.1| 954|Homo sapiens zinc finger protein 618
protein.
Length = 954
Score = 33.5 bits (73), Expect = 1.1
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +1
Query: 58 HPKASSVSXFIFEFQTTDYCTRAASRGIINCVWTISTTPTQTRWSPINTPLNGSP 222
HP+ S F+ T+ + A ++ C + TP T+ TP +GSP
Sbjct: 301 HPEVSPSPRFVAAKTQTNQSGKKAPASVVRCATLLHRTPPATQTQTFRTPNSGSP 355
>AL162393-3|CAI15242.1| 375|Homo sapiens zinc finger protein 618
protein.
Length = 375
Score = 33.5 bits (73), Expect = 1.1
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +1
Query: 58 HPKASSVSXFIFEFQTTDYCTRAASRGIINCVWTISTTPTQTRWSPINTPLNGSP 222
HP+ S F+ T+ + A ++ C + TP T+ TP +GSP
Sbjct: 289 HPEVSPSPRFVAAKTQTNQSGKKAPASVVRCATLLHRTPPATQTQTFRTPNSGSP 343
>AL139321-5|CAH71047.1| 531|Homo sapiens regulator of chromosome
condensation (RCC1) and BTB (POZ) domain containing pro
protein.
Length = 531
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 195 NQYTPKRVTAMNGHIVDNVACGGCHTLLTATKG 293
NQ TP RV A++ V+ + CG HTL +G
Sbjct: 220 NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEG 252
>AL137850-3|CAI15898.1| 954|Homo sapiens zinc finger protein 618
protein.
Length = 954
Score = 33.5 bits (73), Expect = 1.1
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +1
Query: 58 HPKASSVSXFIFEFQTTDYCTRAASRGIINCVWTISTTPTQTRWSPINTPLNGSP 222
HP+ S F+ T+ + A ++ C + TP T+ TP +GSP
Sbjct: 301 HPEVSPSPRFVAAKTQTNQSGKKAPASVVRCATLLHRTPPATQTQTFRTPNSGSP 355
>AL137850-2|CAI15897.1| 375|Homo sapiens zinc finger protein 618
protein.
Length = 375
Score = 33.5 bits (73), Expect = 1.1
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +1
Query: 58 HPKASSVSXFIFEFQTTDYCTRAASRGIINCVWTISTTPTQTRWSPINTPLNGSP 222
HP+ S F+ T+ + A ++ C + TP T+ TP +GSP
Sbjct: 289 HPEVSPSPRFVAAKTQTNQSGKKAPASVVRCATLLHRTPPATQTQTFRTPNSGSP 343
>AK096654-1|BAC04833.1| 531|Homo sapiens protein ( Homo sapiens
cDNA FLJ39335 fis, clone OCBBF2017398, moderately
similar to Homo sapiens RCC1-like G exchanging factor
RLG mRNA. ).
Length = 531
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 195 NQYTPKRVTAMNGHIVDNVACGGCHTLLTATKG 293
NQ TP RV A++ V+ + CG HTL +G
Sbjct: 220 NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEG 252
>AJ319660-1|CAC40027.1| 531|Homo sapiens guanine nucleotide
exchange factor protein.
Length = 531
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 195 NQYTPKRVTAMNGHIVDNVACGGCHTLLTATKG 293
NQ TP RV A++ V+ + CG HTL +G
Sbjct: 220 NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEG 252
>AF334406-1|AAK38372.1| 531|Homo sapiens CLLL7 protein protein.
Length = 531
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 195 NQYTPKRVTAMNGHIVDNVACGGCHTLLTATKG 293
NQ TP RV A++ V+ + CG HTL +G
Sbjct: 220 NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEG 252
>AB075832-1|BAB85538.1| 735|Homo sapiens KIAA1952 protein protein.
Length = 735
Score = 33.5 bits (73), Expect = 1.1
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +1
Query: 58 HPKASSVSXFIFEFQTTDYCTRAASRGIINCVWTISTTPTQTRWSPINTPLNGSP 222
HP+ S F+ T+ + A ++ C + TP T+ TP +GSP
Sbjct: 67 HPEVSPSPRFVAAKTQTNQSGKKAPASVVRCATLLHRTPPATQTQTFRTPNSGSP 121
>AF225407-1|AAO27483.1| 409|Homo sapiens HERC2 protein.
Length = 409
Score = 33.1 bits (72), Expect = 1.4
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +3
Query: 108 GLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACG 260
G LYT G+ R+ +L D +D Q PK V A+ GH V ++ACG
Sbjct: 14 GDLYTWGKGRYGRLGHSDSED---------QLKPKLVEALQGHRVVDIACG 55
Score = 32.7 bits (71), Expect = 1.9
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +3
Query: 99 SDNGLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACGGCHTLL 278
+++G +YT G++ +L D +N + P+ V A+ G V+ VACG HTL
Sbjct: 169 TEDGEVYTWGDNDEGQL-----GDGTTNAI----QRPRLVAALQGKKVNRVACGSAHTLA 219
Query: 279 TAT 287
+T
Sbjct: 220 WST 222
>AF071172-1|AAD08657.1| 4834|Homo sapiens HERC2 protein.
Length = 4834
Score = 33.1 bits (72), Expect = 1.4
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +3
Query: 108 GLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACG 260
G LYT G+ R+ +L D +D Q PK V A+ GH V ++ACG
Sbjct: 4110 GDLYTWGKGRYGRLGHSDSED---------QLKPKLVEALQGHRVVDIACG 4151
Score = 32.7 bits (71), Expect = 1.9
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +3
Query: 99 SDNGLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACGGCHTLL 278
+++G +YT G++ +L D +N + P+ V A+ G V+ VACG HTL
Sbjct: 4265 TEDGEVYTWGDNDEGQL-----GDGTTNAI----QRPRLVAALQGKKVNRVACGSAHTLA 4315
Query: 279 TAT 287
+T
Sbjct: 4316 WST 4318
>J05213-1|AAC95490.1| 317|Homo sapiens sialoprotein precursor
protein.
Length = 317
Score = 32.7 bits (71), Expect = 1.9
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +3
Query: 435 TNSNVDDKQKADNLNGNTNEES-GSIDSLEANVSGSHIVNINDLEIENGSTHDLADLNKD 611
T D+++ + GN NEES +D E ++G+ + N E ENG+ D N +
Sbjct: 144 TKEKESDEEEEEEEEGNENEESEAEVDENEQGINGT---STNSTEAENGNGSSGGD-NGE 199
Query: 612 NIDRVSDTGDSAMDVVE 662
+ S TG +A E
Sbjct: 200 EGEEESVTGANAEGTTE 216
>BC042047-1|AAH42047.2| 1022|Homo sapiens hect domain and RLD 6
protein.
Length = 1022
Score = 32.7 bits (71), Expect = 1.9
Identities = 21/94 (22%), Positives = 46/94 (48%)
Frame = +3
Query: 96 ISDNGLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACGGCHTL 275
+S + +++ G++ H +L L + P+Q +P+RV ++ G + VA GG H+
Sbjct: 143 LSKDSQVFSWGKNSHGQLGL--------GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSF 194
Query: 276 LTATKGSNADFTNNDFNIINEATRQITLTELPPL 377
+ G++ + +N + + R + + PL
Sbjct: 195 ALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPL 228
>AY653203-1|AAV66897.1| 322|Homo sapiens truncated HERC6 protein.
Length = 322
Score = 32.7 bits (71), Expect = 1.9
Identities = 21/94 (22%), Positives = 46/94 (48%)
Frame = +3
Query: 96 ISDNGLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACGGCHTL 275
+S + +++ G++ H +L L + P+Q +P+RV ++ G + VA GG H+
Sbjct: 143 LSKDSQVFSWGKNSHGQLGL--------GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSF 194
Query: 276 LTATKGSNADFTNNDFNIINEATRQITLTELPPL 377
+ G++ + +N + + R + + PL
Sbjct: 195 ALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPL 228
>AY653202-1|AAV66896.1| 364|Homo sapiens truncated HERC6 protein.
Length = 364
Score = 32.7 bits (71), Expect = 1.9
Identities = 21/94 (22%), Positives = 46/94 (48%)
Frame = +3
Query: 96 ISDNGLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACGGCHTL 275
+S + +++ G++ H +L L + P+Q +P+RV ++ G + VA GG H+
Sbjct: 143 LSKDSQVFSWGKNSHGQLGL--------GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSF 194
Query: 276 LTATKGSNADFTNNDFNIINEATRQITLTELPPL 377
+ G++ + +N + + R + + PL
Sbjct: 195 ALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPL 228
>AY653201-1|AAV66895.1| 986|Homo sapiens HERC6 splice variant
protein.
Length = 986
Score = 32.7 bits (71), Expect = 1.9
Identities = 21/94 (22%), Positives = 46/94 (48%)
Frame = +3
Query: 96 ISDNGLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACGGCHTL 275
+S + +++ G++ H +L L + P+Q +P+RV ++ G + VA GG H+
Sbjct: 143 LSKDSQVFSWGKNSHGQLGL--------GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSF 194
Query: 276 LTATKGSNADFTNNDFNIINEATRQITLTELPPL 377
+ G++ + +N + + R + + PL
Sbjct: 195 ALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPL 228
>AK092403-1|BAC03879.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ35084 fis, clone PLACE6005482. ).
Length = 184
Score = 32.7 bits (71), Expect = 1.9
Identities = 21/94 (22%), Positives = 46/94 (48%)
Frame = +3
Query: 96 ISDNGLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACGGCHTL 275
+S + +++ G++ H +L L + P+Q +P+RV ++ G + VA GG H+
Sbjct: 21 LSKDSQVFSWGKNSHGQLGL--------GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSF 72
Query: 276 LTATKGSNADFTNNDFNIINEATRQITLTELPPL 377
+ G++ + +N + + R + + PL
Sbjct: 73 ALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPL 106
>AF336798-1|AAQ14893.1| 1022|Homo sapiens HERC6 protein.
Length = 1022
Score = 32.7 bits (71), Expect = 1.9
Identities = 21/94 (22%), Positives = 46/94 (48%)
Frame = +3
Query: 96 ISDNGLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACGGCHTL 275
+S + +++ G++ H +L L + P+Q +P+RV ++ G + VA GG H+
Sbjct: 143 LSKDSQVFSWGKNSHGQLGL--------GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSF 194
Query: 276 LTATKGSNADFTNNDFNIINEATRQITLTELPPL 377
+ G++ + +N + + R + + PL
Sbjct: 195 ALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPL 228
>L24759-1|AAC37560.1| 317|Homo sapiens bone sialoprotein protein.
Length = 317
Score = 32.3 bits (70), Expect = 2.5
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +3
Query: 435 TNSNVDDKQKADNLNGNTNEES-GSIDSLEANVSGSHIVNINDLEIENGSTHDLADLNKD 611
T D+++ + GN NEES +D E ++G+ + N E ENG+ D N +
Sbjct: 144 TKEKESDEEEEEEEEGNENEESEAEVDENEQGINGT---STNSTEAENGNGSSGED-NGE 199
Query: 612 NIDRVSDTGDSAMDVVE 662
+ S TG +A E
Sbjct: 200 EGEEESVTGANAEGTTE 216
>L09558-1|AAA60549.1| 317|Homo sapiens bone sialoprotein protein.
Length = 317
Score = 32.3 bits (70), Expect = 2.5
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +3
Query: 435 TNSNVDDKQKADNLNGNTNEES-GSIDSLEANVSGSHIVNINDLEIENGSTHDLADLNKD 611
T D+++ + GN NEES +D E ++G+ + N E ENG+ D N +
Sbjct: 144 TKEKESDEEEEEEEEGNENEESEAEVDENEQGINGT---STNSTEAENGNGSSGED-NGE 199
Query: 612 NIDRVSDTGDSAMDVVE 662
+ S TG +A E
Sbjct: 200 EGEEESVTGANAEGTTE 216
>D25215-1|BAA04945.2| 1054|Homo sapiens KIAA0032 protein.
Length = 1054
Score = 32.3 bits (70), Expect = 2.5
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +3
Query: 96 ISDNGLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACGGCHTL 275
++ +G +T G++ H +L L + P+Q +P+RV ++ G + VA GG H+
Sbjct: 156 LAADGQFFTWGKNSHGQLGL--------GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSF 207
Query: 276 LTATKGS 296
+ G+
Sbjct: 208 ALSLSGA 214
>BC038960-1|AAH38960.1| 368|Homo sapiens HERC3 protein protein.
Length = 368
Score = 32.3 bits (70), Expect = 2.5
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +3
Query: 96 ISDNGLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACGGCHTL 275
++ +G +T G++ H +L L + P+Q +P+RV ++ G + VA GG H+
Sbjct: 152 LAADGQFFTWGKNSHGQLGL--------GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSF 203
Query: 276 LTATKGS 296
+ G+
Sbjct: 204 ALSLSGA 210
>AY337518-1|AAR00320.1| 1024|Homo sapiens HECT E3 ubiquitin ligase
protein.
Length = 1024
Score = 32.3 bits (70), Expect = 2.5
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +3
Query: 96 ISDNGLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACGGCHTL 275
++ +GLL+T G +H +L NS + N+ P V + G+ V +ACG HTL
Sbjct: 258 LTQDGLLFTFGAGKHGQL------GHNSTQ---NELRPCLVAELVGYRVTQIACGRWHTL 308
>AC098582-1|AAY41038.1| 382|Homo sapiens unknown protein.
Length = 382
Score = 32.3 bits (70), Expect = 2.5
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +3
Query: 96 ISDNGLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACGGCHTL 275
++ +G +T G++ H +L L + P+Q +P+RV ++ G + VA GG H+
Sbjct: 152 LAADGQFFTWGKNSHGQLGL--------GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSF 203
Query: 276 LTATKGS 296
+ G+
Sbjct: 204 ALSLSGA 210
>AB027289-1|BAA88519.1| 1024|Homo sapiens cyclin-E binding protein 1
protein.
Length = 1024
Score = 32.3 bits (70), Expect = 2.5
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +3
Query: 96 ISDNGLLYTCGESRHNKLCLDDIDDTNSNEVVPNQYTPKRVTAMNGHIVDNVACGGCHTL 275
++ +GLL+T G +H +L NS + N+ P V + G+ V +ACG HTL
Sbjct: 258 LTQDGLLFTFGAGKHGQL------GHNSTQ---NELRPCLVAELVGYRVTQIACGRWHTL 308
>L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein.
Length = 1898
Score = 30.3 bits (65), Expect = 9.9
Identities = 27/87 (31%), Positives = 38/87 (43%)
Frame = +2
Query: 287 QRLERGLHEQRFQHY*RSHQTNNSHRITALTENTSDEQNRRESVLN*RRDKL*RGRQTES 466
QRL+R E+R Q RS Q + L + E+ +R + RR++ + Q E
Sbjct: 536 QRLKRQEEEERLQQRLRSEQQLRREQEERLEQLLKREEEKR--LEQERREQRLKREQEER 593
Query: 467 G*LEWKHERGIRINRLVRGQRERITHR 547
K E R RL R Q ER+ R
Sbjct: 594 RDQLLKREEERRQQRLKREQEERLEQR 620
>BC131742-1|AAI31743.1| 314|Homo sapiens taste receptor, type 2,
member 42 protein.
Length = 314
Score = 30.3 bits (65), Expect = 9.9
Identities = 22/85 (25%), Positives = 36/85 (42%)
Frame = -3
Query: 875 NMVFRQRXIAISXTLSGRSKXL*XHRAALCICFRFVNYFFNHFLFLMDCIGDXFYRIMNI 696
++V R + +S +L R HR A+ + F+ F HF L G F N
Sbjct: 206 SLVRHTRNLKLS-SLGSRDSSTEAHRRAMKMVMSFLFLFIVHFFSLQVANGIFFMLWNNK 264
Query: 695 XLHIVKHRVHNFDHVHSRVTCVGNT 621
+ V ++ F HS + +GN+
Sbjct: 265 YIKFVMLALNAFPSCHSFILILGNS 289
>AK057516-1|BAB71517.1| 573|Homo sapiens protein ( Homo sapiens
cDNA FLJ32954 fis, clone TESTI2008139. ).
Length = 573
Score = 30.3 bits (65), Expect = 9.9
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Frame = +3
Query: 306 FTNNDFNIINEATRQITLTELPPLQKIPAMNKTEENPFLIEDVTNSNVDD------KQKA 467
F + DF ++ + + + E+P ++ I A TEE F + N+ V++ QK
Sbjct: 305 FEDEDFAVLFQDEDRSSPIEIPKIRYITANTDTEEQSFPVPKAFNTRVEELNLDVLLQKV 364
Query: 468 DNLNGNTNEESGSIDSL 518
D+L + + +S S + L
Sbjct: 365 DHLRMSESGKSESFELL 381
>AC016689-1|AAX88865.1| 571|Homo sapiens unknown protein.
Length = 571
Score = 30.3 bits (65), Expect = 9.9
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Frame = +3
Query: 306 FTNNDFNIINEATRQITLTELPPLQKIPAMNKTEENPFLIEDVTNSNVDD------KQKA 467
F + DF ++ + + + E+P ++ I A TEE F + N+ V++ QK
Sbjct: 305 FEDEDFAVLFQDEDRSSPIEIPKIRYITANTDTEEQSFPVPKAFNTRVEELNLDVLLQKV 364
Query: 468 DNLNGNTNEESGSIDSL 518
D+L + + +S S + L
Sbjct: 365 DHLRMSESGKSESFELL 381
>AB199242-1|BAD98114.1| 297|Homo sapiens bitter taste receptor
T2R55 protein.
Length = 297
Score = 30.3 bits (65), Expect = 9.9
Identities = 22/85 (25%), Positives = 36/85 (42%)
Frame = -3
Query: 875 NMVFRQRXIAISXTLSGRSKXL*XHRAALCICFRFVNYFFNHFLFLMDCIGDXFYRIMNI 696
++V R + +S +L R HR A+ + F+ F HF L G F N
Sbjct: 201 SLVRHTRNLKLS-SLGSRDSSTEAHRRAMKMVMSFLFLFIVHFFSLQVANGIFFMLWNNK 259
Query: 695 XLHIVKHRVHNFDHVHSRVTCVGNT 621
+ V ++ F HS + +GN+
Sbjct: 260 YIKFVMLALNAFPSCHSFILILGNS 284
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,610,435
Number of Sequences: 237096
Number of extensions: 2462751
Number of successful extensions: 5797
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 5351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5778
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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