Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_E18
(843 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 38 0.001
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 38 0.002
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 29 0.005
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 35 0.017
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.067
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.20
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.62
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.82
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 29 0.82
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 27 0.95
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 4.4
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 4.4
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 4.4
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 7.7
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 7.7
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 38.3 bits (85), Expect = 0.001
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = -2
Query: 797 PPXPAXXXXXGXGGGXGXXXXXXXPXPPPPXXXGGGGXXPPPPXXXXGPPPPP 639
PP P+ G G P PPPP G P PP PPPPP
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPPPP-RSNAAGSIPLPPQGRSAPPPPP 365
Score = 35.5 bits (78), Expect = 0.009
Identities = 20/71 (28%), Positives = 21/71 (29%)
Frame = +3
Query: 450 PPPPPPPXPXXXXXXXXXXXXXXXXXXXXXXPPPPPXAGGGXXXXXXXPPXPPPPXPPPX 629
PPPPPPP PPPPP + PP PPP
Sbjct: 311 PPPPPPPS---RRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPR 367
Query: 630 XXXGGGGGPXP 662
G P P
Sbjct: 368 SAPSTGRQPPP 378
Score = 31.5 bits (68), Expect = 0.15
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 753 PPPPPXPXXPRXXGGXXXXXPXPPPPPAPP 842
P PP P P G P PP PAPP
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Score = 29.1 bits (62), Expect = 0.82
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 3/56 (5%)
Frame = -2
Query: 797 PPXPAXXXXXGXGGGXGXXXXXXXPXPPPPXXXGGGGXXPPP---PXXXXGPPPPP 639
PP P G P PPPP G PPP PP PP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPP 392
Score = 27.1 bits (57), Expect = 3.3
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 3/32 (9%)
Frame = +2
Query: 749 PPPPPXXPXXXXXA---GGXXXXXPXPPPPPR 835
PPPPP G P PPPPPR
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPR 344
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +2
Query: 749 PPPPPXXPXXXXXAGGXXXXXPXPPPPPRP 838
PPPP G PPPPP P
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 23.8 bits (49), Expect(2) = 0.73
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 515 PPPPPPP 495
PPPPPPP
Sbjct: 311 PPPPPPP 317
Score = 23.8 bits (49), Expect(2) = 3.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 512 PPPPPPP 492
PPPPPPP
Sbjct: 311 PPPPPPP 317
Score = 23.8 bits (49), Expect(2) = 0.73
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 512 PPPPPPP 492
PPPPPPP
Sbjct: 337 PPPPPPP 343
Score = 21.4 bits (43), Expect(2) = 3.4
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = -2
Query: 506 PPPPPXPXXXXGG 468
PPPPP P G
Sbjct: 337 PPPPPPPRSNAAG 349
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 37.5 bits (83), Expect = 0.002
Identities = 21/66 (31%), Positives = 22/66 (33%)
Frame = +3
Query: 447 TPPPPPPPXPXXXXXXXXXXXXXXXXXXXXXXPPPPPXAGGGXXXXXXXPPXPPPPXPPP 626
+PPPPPP PPPPP G PPPP PPP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAG-------PPPPPPPPP 783
Query: 627 XXXXGG 644
GG
Sbjct: 784 AVSAGG 789
Score = 37.5 bits (83), Expect = 0.002
Identities = 21/65 (32%), Positives = 21/65 (32%)
Frame = +3
Query: 453 PPPPPPXPXXXXXXXXXXXXXXXXXXXXXXPPPPPXAGGGXXXXXXXPPXPPPPXPPPXX 632
PPPPPP PPPPP G PPPP PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAG-------PPPPPPPPPA 784
Query: 633 XXGGG 647
GG
Sbjct: 785 VSAGG 789
Score = 37.5 bits (83), Expect = 0.002
Identities = 16/30 (53%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 725 PXPPPPXXXGGGGXXPPPP-XXXXGPPPPP 639
P PPP GG PPPP GPPPPP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 33.9 bits (74), Expect = 0.029
Identities = 16/29 (55%), Positives = 16/29 (55%)
Frame = -2
Query: 725 PXPPPPXXXGGGGXXPPPPXXXXGPPPPP 639
P PPPP G G PPPP PPPPP
Sbjct: 762 PPPPPPPGVAGAG--PPPP-----PPPPP 783
Score = 33.1 bits (72), Expect = 0.051
Identities = 29/99 (29%), Positives = 29/99 (29%)
Frame = +3
Query: 543 PPPPPXAGGGXXXXXXXPPXPPPPXPPPXXXXGGGGGPXPXXXGGGXXXXXXXXXXXXXX 722
PPPPP A P P P PPP GG P P G
Sbjct: 732 PPPPPPA-----VIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAG------------ 774
Query: 723 XXXXXXXXXXPPPPPXPXXPRXXGGXXXXXPXPPPPPAP 839
PPPPP P GG P P P P
Sbjct: 775 ----------PPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 31.5 bits (68), Expect = 0.15
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 679 PPPXXXGXGPPPPPXXXXGGGXGG 608
PPP G GPPPPP GG
Sbjct: 766 PPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 31.1 bits (67), Expect = 0.20
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = -3
Query: 679 PPPXXXGXGPPPPPXXXXGGGXGGGGXGGXXXXXXXPPPAXGGGG 545
PPP GPPPPP G G G PPPA GG
Sbjct: 752 PPPAPIMGGPPPPPPPP---GVAGAG----PPPPPPPPPAVSAGG 789
Score = 29.5 bits (63), Expect = 0.62
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 512 PPPPPPPXPXXXXGG 468
PPPPPPP P GG
Sbjct: 775 PPPPPPPPPAVSAGG 789
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 6/36 (16%)
Frame = +3
Query: 753 PPPPPXPXXPRXXGGXXXXXPX------PPPPPAPP 842
PPPPP P P PPPPP PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 28.3 bits (60), Expect = 1.4
Identities = 16/56 (28%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Frame = +3
Query: 450 PPPPPPPXPXXXXXXXXXXXXXXXXXXXXXXPPPPPX-AGGGXXXXXXXPPXPPPP 614
P P PPP P PPPPP + GG P P P
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 26.6 bits (56), Expect = 4.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 515 PPPPPPPP 492
PPPPPPPP
Sbjct: 761 PPPPPPPP 768
Score = 26.6 bits (56), Expect = 4.4
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 509 PPPPPPXPXXXXGGG 465
PPPPPP P GG
Sbjct: 775 PPPPPPPPPAVSAGG 789
Score = 26.2 bits (55), Expect = 5.8
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +1
Query: 655 PXXXXGGGGXXPPPPXXXGGGGXGXXXXXXXPXPPPXPXXXXXAG 789
P GG PPPP G G P PPP P AG
Sbjct: 754 PAPIMGGPPPPPPPPGVAGAG----------PPPPPPPPPAVSAG 788
Score = 26.2 bits (55), Expect = 5.8
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 449 PPPPPPPXP 475
PPPPPPP P
Sbjct: 775 PPPPPPPPP 783
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 29.5 bits (63), Expect(2) = 0.005
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 512 PPPPPPPXPXXXXGGG 465
PPPPPPP P GG
Sbjct: 945 PPPPPPPPPLVSAAGG 960
Score = 28.7 bits (61), Expect = 1.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 594 PPXPPPPXPPPXXXXGGGG 650
P PPPP PPP GG
Sbjct: 942 PAFPPPPPPPPPLVSAAGG 960
Score = 28.3 bits (60), Expect = 1.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 515 PPPPPPPPXPXXXXGG 468
PPPPPPPP GG
Sbjct: 945 PPPPPPPPPLVSAAGG 960
Score = 26.6 bits (56), Expect = 4.4
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -2
Query: 509 PPPPPPXPXXXXGGGG 462
PPPPPP P GG
Sbjct: 945 PPPPPPPPPLVSAAGG 960
Score = 26.2 bits (55), Expect = 5.8
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 449 PPPPPPPXP 475
PPPPPPP P
Sbjct: 945 PPPPPPPPP 953
Score = 25.8 bits (54), Expect(2) = 0.005
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 515 PPPPPPPPXP 486
P PPPPPP P
Sbjct: 905 PTPPPPPPLP 914
Score = 23.4 bits (48), Expect(2) = 6.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 819 PPPPPAPP 842
PPPPP PP
Sbjct: 946 PPPPPPPP 953
Score = 20.6 bits (41), Expect(2) = 6.6
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +3
Query: 753 PPPPPXP 773
PPPPP P
Sbjct: 908 PPPPPLP 914
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 34.7 bits (76), Expect = 0.017
Identities = 19/60 (31%), Positives = 19/60 (31%), Gaps = 1/60 (1%)
Frame = +3
Query: 450 PPPPPPPXPXXXXXXXXXXXXXXXXXXXXXXPPP-PPXAGGGXXXXXXXPPXPPPPXPPP 626
PPPPPPP P P PP PP PPPP PP
Sbjct: 189 PPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPPTLPP 248
Score = 27.1 bits (57), Expect = 3.3
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 749 PPPPPXXPXXXXXAGGXXXXXPXPPPPPRPP 841
PPP P A PPPPP PP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 27.1 bits (57), Expect(2) = 0.19
Identities = 19/79 (24%), Positives = 19/79 (24%)
Frame = +3
Query: 546 PPPPXAGGGXXXXXXXPPXPPPPXPPPXXXXGGGGGPXPXXXGGGXXXXXXXXXXXXXXX 725
PP A PP PPPP P P G
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSG----RAVSPEIPPTYT 228
Query: 726 XXXXXXXXXPPPPPXPXXP 782
PPPPP P P
Sbjct: 229 PKQADPLPAPPPPPPPTLP 247
Score = 26.6 bits (56), Expect = 4.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 515 PPPPPPPP 492
PPPPPPPP
Sbjct: 189 PPPPPPPP 196
Score = 26.6 bits (56), Expect = 4.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 515 PPPPPPPP 492
PPPPPPPP
Sbjct: 190 PPPPPPPP 197
Score = 26.2 bits (55), Expect = 5.8
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 512 PPPPPPPXP 486
PPPPPPP P
Sbjct: 189 PPPPPPPPP 197
Score = 25.8 bits (54), Expect = 7.7
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 515 PPPPPPPPXP 486
PPPPPPP P
Sbjct: 238 PPPPPPPTLP 247
Score = 22.6 bits (46), Expect(2) = 0.19
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 813 PXPPPPPAPP 842
P PPPP PP
Sbjct: 239 PPPPPPTLPP 248
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 32.7 bits (71), Expect = 0.067
Identities = 25/72 (34%), Positives = 25/72 (34%), Gaps = 3/72 (4%)
Frame = -3
Query: 655 GPPPPPXXXXG-GGXGGGG--XGGXXXXXXXPPPAXGGGGGXXXXXXXXXXXXXXXXXXP 485
GPPP P G GG GG G GG P GG GG P
Sbjct: 199 GPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGP 258
Query: 484 KXXGXGGGGGGG 449
G G GG GG
Sbjct: 259 GGFGGGPGGHGG 270
Score = 32.3 bits (70), Expect = 0.089
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -3
Query: 619 GXGGGGXGGXXXXXXXPPPAXGGGGGXXXXXXXXXXXXXXXXXXPKXXGXGGGGGG 452
G GGG GG PPP GG GG G GG GG
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGG 239
Score = 28.7 bits (61), Expect = 1.1
Identities = 24/82 (29%), Positives = 24/82 (29%)
Frame = -3
Query: 838 GAGGGGGXGXXXXXPPXXRGXXGXGGGGGXXXXXXXXXXXXXXXXXXXXXXXXPPPXXXG 659
G G GG G PP G G GG GG P G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGG-----PGGFG 241
Query: 658 XGPPPPPXXXXGGGXGGGGXGG 593
GP G G G GG GG
Sbjct: 242 GGPGGFGGGLGGFGGGPGGFGG 263
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +1
Query: 646 GGGPXXXXGGGGXXPPPPXXXGG-GGXG 726
GGG GG G PP P GG GG G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFG 214
Score = 27.1 bits (57), Expect = 3.3
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -3
Query: 661 GXGPPPPPXXXXGGGXGGGGXGGXXXXXXXPPPAXGGGGG 542
G GP G G G GG GG P GGG G
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPG 266
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 640 GGGGGPXXXXGGGGXXPPPPXXXGGGGXG 726
G GGGP GG G P GGG G
Sbjct: 225 GFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 640 GGGGGPXXXXGGGGXXPPPPXXXGGGGXG 726
G GGGP GG G P GGG G
Sbjct: 239 GFGGGPGGFGGGLGGFGGGPGGFGGGPGG 267
Score = 25.8 bits (54), Expect = 7.7
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = -3
Query: 841 GGAGG-GGGXGXXXXXPPXXRGXXGXGGGG 755
GG GG GGG G P G G GGG
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGFGGG 250
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.1 bits (67), Expect = 0.20
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +3
Query: 543 PPPPPXAGGGXXXXXXXPPXPPPPXPPP 626
PPPPP G PP PPP PPP
Sbjct: 9 PPPPPPPPG------FEPPSQPPPPPPP 30
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 753 PPPPPXPXXPRXXGGXXXXXPXPPPPP 833
PPPPP P G P PPPPP
Sbjct: 9 PPPPPPPP-----GFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +3
Query: 594 PPXPPPPXPPPXXXXGGGGGPXPXXXG 674
PP PPP PPP P P G
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 26.6 bits (56), Expect = 4.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 515 PPPPPPPP 492
PPPPPPPP
Sbjct: 9 PPPPPPPP 16
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.5 bits (63), Expect = 0.62
Identities = 24/99 (24%), Positives = 25/99 (25%)
Frame = +3
Query: 546 PPPPXAGGGXXXXXXXPPXPPPPXPPPXXXXGGGGGPXPXXXGGGXXXXXXXXXXXXXXX 725
P P A PP P P P G P P
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPK 1183
Query: 726 XXXXXXXXXPPPPPXPXXPRXXGGXXXXXPXPPPPPAPP 842
PPP P P+ G P PPP APP
Sbjct: 1184 PAAGVPPV-PPPSEAPPVPKPSVGVP---PVPPPSTAPP 1218
Score = 29.5 bits (63), Expect = 0.62
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 546 PPPPXAGGGXXXXXXXPPXPPPPXPPPXXXXGGGGGPXP 662
PPP A PP PPP PP G P P
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 26.2 bits (55), Expect = 5.8
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +3
Query: 543 PPPPPXAGGGXXXXXXXPPXPPPPXPPPXXXXGGGGGPXP 662
PP P A G PP PPP PP G P P
Sbjct: 1179 PPVPKPAAG-------VPPVPPPSEAPPVPKPSVGVPPVP 1211
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.1 bits (62), Expect = 0.82
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +3
Query: 543 PPPPPXAGGGXXXXXXXPPXPPPPXPPPXXXXGGGGGPXP 662
PPPPP + P PP PPP P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 749 PPPPPXXPXXXXXAGGXXXXXPXPPPPPRP 838
PPPPP A P PPPP P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 719 PPPPXXXGGGGXXPPPPXXXXGPPPPP 639
PPPP PP P PPPP
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 25.8 bits (54), Expect = 7.7
Identities = 12/38 (31%), Positives = 13/38 (34%)
Frame = +3
Query: 543 PPPPPXAGGGXXXXXXXPPXPPPPXPPPXXXXGGGGGP 656
PP P + PP PP PPP GP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGP 1727
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 29.1 bits (62), Expect = 0.82
Identities = 20/72 (27%), Positives = 21/72 (29%)
Frame = -3
Query: 661 GXGPPPPPXXXXGGGXGGGGXGGXXXXXXXPPPAXGGGGGXXXXXXXXXXXXXXXXXXPK 482
G PPPP G G G GG G GG G
Sbjct: 72 GNAAPPPPGAEGGPGAGFGGFPGAGPGGARTFHFNMGGPGGAQFFSASDPNDIFERVFGH 131
Query: 481 XXGXGGGGGGGV 446
GGG GGG+
Sbjct: 132 AFAGGGGMGGGM 143
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.6 bits (56), Expect = 4.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 515 PPPPPPPP 492
PPPPPPPP
Sbjct: 306 PPPPPPPP 313
Score = 26.6 bits (56), Expect = 4.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 515 PPPPPPPP 492
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
Score = 26.2 bits (55), Expect = 5.8
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 512 PPPPPPPXP 486
PPPPPPP P
Sbjct: 306 PPPPPPPPP 314
Score = 26.2 bits (55), Expect = 5.8
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 449 PPPPPPPXP 475
PPPPPPP P
Sbjct: 306 PPPPPPPPP 314
Score = 24.6 bits (51), Expect(2) = 0.95
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = +3
Query: 597 PXPPPPXPPPXXXXGGGGGPXPXXXGG 677
P PPPP PP P P G
Sbjct: 306 PPPPPPPPPSNDFWKDSNEPAPADNKG 332
Score = 23.4 bits (48), Expect(2) = 7.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 819 PPPPPAPP 842
PPPPP PP
Sbjct: 307 PPPPPPPP 314
Score = 22.6 bits (46), Expect(2) = 0.95
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +3
Query: 555 PXAGGGXXXXXXXPPXPPPP 614
P +G PP PPPP
Sbjct: 295 PSSGDSANGGLPPPPPPPPP 314
Score = 20.6 bits (41), Expect(2) = 7.4
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +3
Query: 753 PPPPPXP 773
PPPPP P
Sbjct: 306 PPPPPPP 312
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.6 bits (56), Expect = 4.4
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Frame = -2
Query: 719 PPPPXXXGGGGXXPPPPXXXXG----PPPP 642
PPPP G PPPP PPPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPP 237
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Frame = -2
Query: 719 PPPPXXXGGGGXXPPPP-XXXXGP--PPPP 639
PPPP G PPPP G PPPP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Frame = -2
Query: 719 PPPPXXXGGGGXXPPPP-XXXXGP--PPPP 639
PPPP G PPPP G PPPP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Frame = -2
Query: 719 PPPPXXXGGGGXXPPPP-XXXXGP--PPPP 639
PPPP G PPPP G PPPP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Frame = -2
Query: 719 PPPPXXXGGGGXXPPPP-XXXXGP--PPPP 639
PPPP G PPPP G PPPP
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Frame = -2
Query: 719 PPPPXXXGGGGXXPPPP-XXXXGP--PPPP 639
PPPP G PPPP G PPPP
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Frame = -2
Query: 719 PPPPXXXGGGGXXPPPP-XXXXGP--PPPP 639
PPPP G PPPP G PPPP
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Frame = -2
Query: 719 PPPPXXXGGGGXXPPPP-XXXXGP--PPPP 639
PPPP G PPPP G PPPP
Sbjct: 299 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Frame = -2
Query: 719 PPPPXXXGGGGXXPPPP-XXXXGP--PPPP 639
PPPP G PPPP G PPPP
Sbjct: 312 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 4.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 515 PPPPPPPP 492
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 4.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 515 PPPPPPPP 492
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 25.8 bits (54), Expect = 7.7
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 515 PPPPPPPPXP 486
P PPPPPP P
Sbjct: 3 PAPPPPPPAP 12
Score = 25.8 bits (54), Expect = 7.7
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 515 PPPPPPPPXP 486
PPPPPP P P
Sbjct: 5 PPPPPPAPAP 14
Score = 23.4 bits (48), Expect(2) = 7.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 452 PPPPPPXP 475
PPPPPP P
Sbjct: 5 PPPPPPAP 12
Score = 20.6 bits (41), Expect(2) = 7.9
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +2
Query: 449 PPPPPPP 469
P PPPPP
Sbjct: 3 PAPPPPP 9
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.8 bits (54), Expect = 7.7
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 543 PPPPPXAGGGXXXXXXXPPXPPPPXPPPXXXXGGGGGP 656
PPPPP A P PP PP G P
Sbjct: 1883 PPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNP 1920
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,887,440
Number of Sequences: 5004
Number of extensions: 36658
Number of successful extensions: 808
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 387
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 416455520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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