Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_E17
(1015 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 41 3e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.009
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 36 0.009
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.20
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.45
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 3.2
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 4.2
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 9.7
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 9.7
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 40.7 bits (91), Expect = 3e-04
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +3
Query: 777 PPPXPPXPXPXXXPXPXPRXXXXPXQXVGPRXPPPPXXAXGXTPXPPXGXP 929
PPP P P P P P P P PPPP A P PP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 36.3 bits (80), Expect = 0.007
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +3
Query: 780 PPXPPXPXPXXXPXPXPRXXXXPXQXVGPRXPPPPXXAXGXTPXPPXGXPXP 935
PP PP P P P P +G PPPP PP P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.9 bits (64), Expect = 0.60
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +3
Query: 765 PXXXPPPXPPXPXPXXXPXPXPRXXXXPXQXVGPRXPPPPXXAXGXTPXPPXGXP 929
P P P P P P P GP PPPP G P PP P
Sbjct: 737 PAVIVPTPAPAPIPVPPPAPI---------MGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.5 bits (63), Expect = 0.79
Identities = 17/62 (27%), Positives = 20/62 (32%)
Frame = +1
Query: 394 TPPPPPPXGXXXXXXPYXXGXXQPXPPLXHPLXXKPXXXXPXXGRGXXPPXXXTXPSXGG 573
+PPPPPP P P P + P P P PP P+
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGP---PPPPPPPGVAGAGPPPPPPPPPAVSA 787
Query: 574 GG 579
GG
Sbjct: 788 GG 789
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/63 (28%), Positives = 18/63 (28%)
Frame = +3
Query: 765 PXXXPPPXPPXPXPXXXPXPXPRXXXXPXQXVGPRXPPPPXXAXGXTPXPPXGXPXPTQR 944
P P P P P P P GP PPPP A P P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVS-AGGSRYYAPAPQAE 800
Query: 945 PXP 953
P P
Sbjct: 801 PEP 803
Score = 28.3 bits (60), Expect = 1.8
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +3
Query: 816 PXPXPRXXXXPXQXVGPRXPPPPXXAXGXTPXPPXGXPXPTQRPXPSXXSP 968
P P P P P PPP G P PP P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.9 bits (79), Expect = 0.009
Identities = 21/62 (33%), Positives = 22/62 (35%)
Frame = +3
Query: 780 PPXPPXPXPXXXPXPXPRXXXXPXQXVGPRXPPPPXXAXGXTPXPPXGXPXPTQRPXPSX 959
PP PP P P P + P PPP A G P PP G P P S
Sbjct: 311 PPPPPPPSRRNRGKP-PIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSA 369
Query: 960 XS 965
S
Sbjct: 370 PS 371
Score = 35.5 bits (78), Expect = 0.012
Identities = 21/69 (30%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Frame = +3
Query: 765 PXXXPPPXPPXPXPXXXPX-PXPRXXXXPXQXVGPRXPPPPXXAXGXTPXPPXGXPXPTQ 941
P PP PP P P P P P PP P P PP P P
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAA-PAPPP 478
Query: 942 RPXPSXXSP 968
P P+ +P
Sbjct: 479 APAPAPAAP 487
Score = 30.7 bits (66), Expect = 0.34
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +3
Query: 777 PPPXPPXPXPXXXPXPXPRXXXXPXQXVGPRXPPPPXXAXGXTPXPPXGXPXPTQRP 947
PPP PP P P P P PPP PP G T P
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVS--NPPAPPPAIPGRSAPALPPLGNASRTSTP 415
Score = 30.3 bits (65), Expect = 0.45
Identities = 24/90 (26%), Positives = 25/90 (27%), Gaps = 3/90 (3%)
Frame = +3
Query: 693 PPXXGGGAAXXAGXXXXXXXXXXXPXXXPPPXPPXPXPXXXPXPXPRXXXXPXQXVGPRX 872
PP G +A P PP PP P P P P
Sbjct: 392 PPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMG-----APAA 446
Query: 873 PPPPXXAXGXTPXP---PXGXPXPTQRPXP 953
PP P A P P P P P P P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Score = 28.7 bits (61), Expect = 1.4
Identities = 18/70 (25%), Positives = 20/70 (28%), Gaps = 2/70 (2%)
Frame = +3
Query: 765 PXXXPPPXPPXPXPXXXPXPXPRXXXXPXQXVGPRXPP--PPXXAXGXTPXPPXGXPXPT 938
P PP P P P P P PP PP P P G P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 939 QRPXPSXXSP 968
P + +P
Sbjct: 448 PLPPSAPIAP 457
Score = 27.1 bits (57), Expect = 4.2
Identities = 19/62 (30%), Positives = 20/62 (32%), Gaps = 4/62 (6%)
Frame = +1
Query: 397 PPPPPPXGXXXXXXPYXXGXXQ---PXPPLXHPLXXKPXXXXPXXGR-GXXPPXXXTXPS 564
PPPPPP P G P PP P GR PP + PS
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPS 371
Query: 565 XG 570
G
Sbjct: 372 TG 373
Score = 25.8 bits (54), Expect = 9.7
Identities = 17/67 (25%), Positives = 19/67 (28%), Gaps = 8/67 (11%)
Frame = +3
Query: 777 PPPXPPXPXPXXXPX--------PXPRXXXXPXQXVGPRXPPPPXXAXGXTPXPPXGXPX 932
PPP PP P P P P PP P PP P
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPS 371
Query: 933 PTQRPXP 953
++P P
Sbjct: 372 TGRQPPP 378
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.9 bits (79), Expect = 0.009
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +3
Query: 789 PPXPXPXXXPX-PXPRXXXXPXQXVGPRXPPPPXXAXGXTPXPPXGXPXPTQRP 947
PP P P P P P P PP P A G P PP P +P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 31.5 bits (68), Expect = 0.20
Identities = 22/70 (31%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Frame = +3
Query: 765 PXXXPPPXPPXPXPXXXPXPXPRXXXXPXQXVGPRXPPP-PXXAXGXTPXP-PXGXPXPT 938
P P PP P P P P+ P PP P + P P P G P P
Sbjct: 1084 PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAP-PV 1142
Query: 939 QRPXPSXXSP 968
P PS +P
Sbjct: 1143 --PKPSVAAP 1150
Score = 31.1 bits (67), Expect = 0.26
Identities = 18/60 (30%), Positives = 22/60 (36%)
Frame = +3
Query: 789 PPXPXPXXXPXPXPRXXXXPXQXVGPRXPPPPXXAXGXTPXPPXGXPXPTQRPXPSXXSP 968
PP P P P P P + PP P + G P P P P+ PS +P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSG-APSAPPPVPAPSSE-IPSIPAP 1079
Score = 28.7 bits (61), Expect = 1.4
Identities = 20/61 (32%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Frame = +3
Query: 789 PPXPXPXXXPXPXPRXXXXPXQXVGPRXPPPPXXAXGXTPXP-PXGXPXPTQRPXPSXXS 965
PP P P P P V PP P + P P P G P P P PS +
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAP-PV--PKPSVAA 1168
Query: 966 P 968
P
Sbjct: 1169 P 1169
Score = 28.3 bits (60), Expect = 1.8
Identities = 19/68 (27%), Positives = 19/68 (27%)
Frame = +3
Query: 765 PXXXPPPXPPXPXPXXXPXPXPRXXXXPXQXVGPRXPPPPXXAXGXTPXPPXGXPXPTQR 944
P P PP P P P P P PP G P P P
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV- 1171
Query: 945 PXPSXXSP 968
P PS P
Sbjct: 1172 PAPSSGIP 1179
Score = 28.3 bits (60), Expect = 1.8
Identities = 21/65 (32%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Frame = +3
Query: 777 PPPXPPXPXPXXXPXPXPRXXXXPXQXVGPRXPPPPXXAXGXTPXP-PXGXPXPTQRPXP 953
PP PP P P P P P PP P + G P P P P P P
Sbjct: 1189 PPVPPPSEAP---PVPKPSVGVPPVPPPSTA-PPVPTPSAGLPPVPVPTAKAPPV--PAP 1242
Query: 954 SXXSP 968
S +P
Sbjct: 1243 SSEAP 1247
Score = 27.9 bits (59), Expect = 2.4
Identities = 21/63 (33%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Frame = +3
Query: 783 PXPPXPXPXXXPXPXP-RXXXXPXQXVGPRXPPPPXXAXGXTPXPPXGXPXPTQRPXPSX 959
P P P P P P P VG PPP A P P G P P P P+
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAP-PVPTPSAGLP-PV--PVPTA 1234
Query: 960 XSP 968
+P
Sbjct: 1235 KAP 1237
Score = 27.5 bits (58), Expect = 3.2
Identities = 20/71 (28%), Positives = 21/71 (29%), Gaps = 3/71 (4%)
Frame = +3
Query: 765 PXXXPPPXPPXPXPXXXPXPXPRXXXXPXQXVGPRXPPP---PXXAXGXTPXPPXGXPXP 935
P P PP P P P P P+ P PPP P P P P P
Sbjct: 1033 PIPVPSTAPPVPIPTSTP-PVPKSSSG-----APSAPPPVPAPSSEIPSIPAPSGAPPVP 1086
Query: 936 TQRPXPSXXSP 968
P P
Sbjct: 1087 APSGIPPVPKP 1097
Score = 27.1 bits (57), Expect = 4.2
Identities = 16/68 (23%), Positives = 20/68 (29%)
Frame = +3
Query: 765 PXXXPPPXPPXPXPXXXPXPXPRXXXXPXQXVGPRXPPPPXXAXGXTPXPPXGXPXPTQR 944
P PP P P P P + + PP P + P P P
Sbjct: 986 PPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPV-- 1043
Query: 945 PXPSXXSP 968
P P+ P
Sbjct: 1044 PIPTSTPP 1051
Score = 27.1 bits (57), Expect = 4.2
Identities = 17/64 (26%), Positives = 18/64 (28%)
Frame = +3
Query: 777 PPPXPPXPXPXXXPXPXPRXXXXPXQXVGPRXPPPPXXAXGXTPXPPXGXPXPTQRPXPS 956
P PP P P P P PP P + P P P P PS
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPV-PAPS 1118
Query: 957 XXSP 968
P
Sbjct: 1119 GAPP 1122
Score = 27.1 bits (57), Expect = 4.2
Identities = 19/70 (27%), Positives = 20/70 (28%), Gaps = 2/70 (2%)
Frame = +3
Query: 765 PXXXPPPXPPXPXPXXXPXPXPRXXXXPXQXV-GPRXPPPPXXAXGXTPXPPXGXPXPT- 938
P P PP P P P P P PP P P P P+
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSV 1249
Query: 939 QRPXPSXXSP 968
P S SP
Sbjct: 1250 STPRSSVPSP 1259
Score = 25.8 bits (54), Expect = 9.7
Identities = 18/74 (24%), Positives = 22/74 (29%)
Frame = +1
Query: 778 PPPPPPXRXPXXPQXPXXGXXXXRXXEWXRXXXXRPQXLXVPLRXPXXGXPXQHNAPXPP 957
PP P P P P+ P +P P+ P P + P
Sbjct: 1150 PPVPAPSGAPPVPK-PSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVP 1208
Query: 958 XXPPTXRXPPXRTP 999
PP PP TP
Sbjct: 1209 PVPPPSTAPPVPTP 1222
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.5 bits (68), Expect = 0.20
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +3
Query: 765 PXXXPPPXPPXPXPXXXPXPXPRXXXXPXQXVGPRXPPPPXXAXGXTPXPP 917
P PP P P P P P GP PPP P P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 27.9 bits (59), Expect = 2.4
Identities = 17/57 (29%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Frame = +3
Query: 804 PXXXPXPXPRXXXXPXQXVGPRXPPPPXXA--XGXTPXPPXGXPXPTQRPXPSXXSP 968
P P P+ P Q P PPPP P P G P P P+ +P
Sbjct: 1686 PVSTPPVRPQSAAPP-QMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 27.9 bits (59), Expect = 2.4
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +1
Query: 880 RPQXLXVPLRXPXXGXPXQHNAPXPPXXPPTXRXPPXRTP 999
RPQ P P + P PP PP PP P
Sbjct: 1693 RPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.3 bits (65), Expect = 0.45
Identities = 14/51 (27%), Positives = 17/51 (33%)
Frame = +3
Query: 804 PXXXPXPXPRXXXXPXQXVGPRXPPPPXXAXGXTPXPPXGXPXPTQRPXPS 956
P P P+ P PR PP P P P P+ P P+
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPA 175
Score = 29.5 bits (63), Expect = 0.79
Identities = 24/77 (31%), Positives = 26/77 (33%), Gaps = 10/77 (12%)
Frame = +3
Query: 765 PXXXPP-PXPPXPXPXXXP------XPXPRXXXXPXQXVGPRXPPP--PXXAXGXTPXPP 917
P PP P P P P P P P P Q P PP P P PP
Sbjct: 140 PTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP 199
Query: 918 XGXPXP-TQRPXPSXXS 965
P P +Q P + S
Sbjct: 200 KVPPPPLSQAPVANTSS 216
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.5 bits (58), Expect = 3.2
Identities = 18/45 (40%), Positives = 19/45 (42%)
Frame = -1
Query: 898 PXAXXGGGGXRGPTXWXGXXXXRGXGFGXFXGXGXGGXGGGCXXG 764
P + G GG RG G RG GFG G GG GG G
Sbjct: 5 PGSRGGRGGSRGGRG--GFNGGRG-GFGGGRGGARGGGRGGARGG 46
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.1 bits (57), Expect = 4.2
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -3
Query: 542 GGXXPRPXXGXXXXGFXXXGWXXGGXGWXXPXXXGXXXXXXPXGGGGGG 396
GG P P GF G GG G G GGG GG
Sbjct: 198 GGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 9.7
Identities = 16/63 (25%), Positives = 18/63 (28%)
Frame = +3
Query: 777 PPPXPPXPXPXXXPXPXPRXXXXPXQXVGPRXPPPPXXAXGXTPXPPXGXPXPTQRPXPS 956
PPP PP P + V P PP P P PT P +
Sbjct: 192 PPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPPTLPPQST 251
Query: 957 XXS 965
S
Sbjct: 252 NTS 254
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 779 PPXPPPAXPPKXPKXPP 829
PP PP PP P PP
Sbjct: 12 PPPPPGFEPPSQPPPPP 28
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,048,830
Number of Sequences: 5004
Number of extensions: 26465
Number of successful extensions: 282
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 527257104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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