Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_E15
(901 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 34 0.024
SPAC18G6.05c |||translation elongation regulator Gcn1 |Schizosac... 31 0.22
SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual 31 0.29
SPBC428.07 |meu6||meiotic chromosome segregation protein Meu6|Sc... 29 0.68
SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces... 29 0.90
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 29 0.90
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 28 2.1
SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr ... 28 2.1
SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr... 27 2.7
SPAC222.07c |hri2||eIF2 alpha kinase Hri2|Schizosaccharomyces po... 27 2.7
SPCC1919.14c |bdp1||transcription factor TFIIIB complex subunit ... 27 3.6
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 27 4.8
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 4.8
SPAC29A4.11 |rga3||GTPase activating protein Rga3|Schizosaccharo... 26 6.3
SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr 2... 26 6.3
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 26 6.3
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 26 8.4
SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|ch... 26 8.4
SPBC29A10.05 |exo1|mut2|exonuclease I Exo1|Schizosaccharomyces p... 26 8.4
SPAC23D3.10c |eng2||endo-1,3-beta-glucanase Eng2|Schizosaccharom... 26 8.4
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 26 8.4
SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual 26 8.4
SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces p... 26 8.4
SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr 1||... 26 8.4
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 34.3 bits (75), Expect = 0.024
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 1/196 (0%)
Frame = +3
Query: 201 NKMGSNSSKPTDTSLVLKTELELGNSDPRSPTPEITRTPLQGKNGAKHNITKNIDLRKTF 380
N + S SSKPTDT+ + N+ P + + +IT +P + IT + L +
Sbjct: 342 NTIISRSSKPTDTT----NSISFANTTPENTSTQIT-SPTAVNSSTP--ITSSSVLNSST 394
Query: 381 ESTNGDEKLIHNNPILSAVIKNHLQSYDPRSPTQDFERTPIIISSKINDLTNDTENLRLI 560
T+ L + PI S+ + N S S + TPI S+ +N T T + L
Sbjct: 395 PITS-SSILNTSTPITSSSVLN--SSTPITSSSILNSSTPITSSTVLNSSTPITSSTAL- 450
Query: 561 SDSCTSPITSKDKDNSCETYMEAKEF-SPDLISPKNLCNGFLDSTFNDTLQDNEEPLGSS 737
+ ++PITS NS + S I+ + N T + T+ ++ P+ SS
Sbjct: 451 --NTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTSTPIT-SSTVVNSSTPITSS 507
Query: 738 TASKETLEANKSNENN 785
TA + S+ N
Sbjct: 508 TALNTSTPITSSSVLN 523
>SPAC18G6.05c |||translation elongation regulator Gcn1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2670
Score = 31.1 bits (67), Expect = 0.22
Identities = 19/78 (24%), Positives = 36/78 (46%)
Frame = +3
Query: 387 TNGDEKLIHNNPILSAVIKNHLQSYDPRSPTQDFERTPIIISSKINDLTNDTENLRLISD 566
T+ +++L +L + HL S DP R +++ S ++ L+ +E+++L
Sbjct: 1293 TDANDRLREATVVLFGTVAQHLPSNDP--------RLAVVMDSLLSVLSTPSESVQLAVA 1344
Query: 567 SCTSPITSKDKDNSCETY 620
C P+ K S E Y
Sbjct: 1345 VCLPPLVKKSLGKSKEYY 1362
>SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1202
Score = 30.7 bits (66), Expect = 0.29
Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 3/143 (2%)
Frame = +3
Query: 249 LKTELELGNSDPRSPTPEITRTPLQGKNGAKHNITKNIDLRKTFESTNGDEKLIHNNPIL 428
LK L+L N D + ++ T KN + DL++ TN + I+ + +
Sbjct: 654 LKYNLQLPNVDLLKESEAVSET----KNTKNNTFILKSDLKEEERLTNFTIEEINKHKAI 709
Query: 429 SAVIKNHLQSYDPRSPTQDFERTPIIISSKINDLTNDTENLRLISD--SCTS-PITSKDK 599
++ L+ D S ++ SSK + T + + I + S S +TS K
Sbjct: 710 GVALRKLLEEADTSSNFSS-SNNHVLDSSKHTVSSASTSSRKFIENYKSLESIGLTSFVK 768
Query: 600 DNSCETYMEAKEFSPDLISPKNL 668
DN + E ++ + + PKNL
Sbjct: 769 DNKLKASKELQKLIEENVFPKNL 791
>SPBC428.07 |meu6||meiotic chromosome segregation protein
Meu6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 651
Score = 29.5 bits (63), Expect = 0.68
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 684 DSTFNDTLQDNEEPLGSSTASKETLEANKSNENN 785
+ TF + + NE GS+ A ETLE SNE +
Sbjct: 15 EPTFENVSEHNEHDSGSAEAQVETLEVPLSNETD 48
>SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 967
Score = 29.1 bits (62), Expect = 0.90
Identities = 40/195 (20%), Positives = 80/195 (41%), Gaps = 3/195 (1%)
Frame = +3
Query: 213 SNSSKPTDTSLVLKTELELGNSDPRSPTPEITRTPLQGKNGAKHNITKNIDL-RKTFEST 389
S++ P TSL L L S+ + TP T TP++ + + H ++ L ++
Sbjct: 65 SSAVDPRTTSLEDVPRLILTRSNSQEQTPLRTHTPVEYMSDSIHKSLADLQLGGSSYSVA 124
Query: 390 NGDEKLIHNNPILSAVIKNHLQSYDPRSPTQDFERT-PIIISSKINDL-TNDTENLRLIS 563
++ ++ + A + + S P++ R+ + SS N+L T ++ N L +
Sbjct: 125 ESPVPVLQSSAVSEA---DDMASAHSAHPSRKASRSLRLFESSTSNNLETGNSTNTALHN 181
Query: 564 DSCTSPITSKDKDNSCETYMEAKEFSPDLISPKNLCNGFLDSTFNDTLQDNEEPLGSSTA 743
S S+ S + A+ ++IS K+ S + + GSS
Sbjct: 182 VSSPLESVSERLSKSGSPSVGAQHDLDEVISEKDTSLSRRSSRGRSSAPKRRKDSGSSKT 241
Query: 744 SKETLEANKSNENNQ 788
+ + N S +++Q
Sbjct: 242 TATYIPHNPSKKSSQ 256
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 29.1 bits (62), Expect = 0.90
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Frame = +3
Query: 504 IISSKINDLTNDTENLRLISDSCTSPITS--KDKDNSCETYMEAKEFSPDLISPKNLCNG 677
+ S++N+L + + S+ +S +++ +K+ + T E E L + LCN
Sbjct: 529 VYESQLNELKGELQTEISNSEHLSSQLSTLAAEKEAAVATNNELSESKNSL---QTLCNA 585
Query: 678 FLDSTFNDTLQ--DNEEPLGS-STASKETLEANKSNENN 785
F + +Q +NE+ S T+ K+ E+++ ENN
Sbjct: 586 FQEKLAKSVMQLKENEQNFSSLDTSFKKLNESHQELENN 624
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 27.9 bits (59), Expect = 2.1
Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 9/141 (6%)
Frame = +3
Query: 183 LLDYINNKMGSNSSKPTDTSLVLKTELELGNSDPRSPTPEITRTPLQGKNGAKHNITKNI 362
LL+Y+ + +G++ KP ++ + EL NSD E +R L AK +KN
Sbjct: 288 LLEYLEDIIGTSKYKP----IIEENMQELSNSDDICAEKE-SRLKLVLSEKAKLEDSKNS 342
Query: 363 ------DLRKTFESTNGDEK-LIHNNPILSAVIKNHLQSYDPR--SPTQDFERTPIIISS 515
D + F N + +++ +++N L S + + + + FE+T IS
Sbjct: 343 VLSFLKDENELFMKQNQLYRTILYETRNKKTLVQNLLNSLEGKLQAHLEKFEQTERDISE 402
Query: 516 KINDLTNDTENLRLISDSCTS 578
K ++ + E + + CTS
Sbjct: 403 KNEEVKSLREKAAKVKNDCTS 423
>SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr
2|||Manual
Length = 962
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 390 NGDEKLIHNNPILSAVIKNHLQSYD 464
N +K IH NP+LS V + +S+D
Sbjct: 808 NNSQKDIHRNPLLSHVFDTNTKSFD 832
>SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 568
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +3
Query: 660 KNLCNGFLDSTFNDTLQDNEEPLGSSTASKETLEANKSNEN 782
K++C L++ + LQ+ ST + +T +A+ +NEN
Sbjct: 421 KSICGDILENRWKSLLQEISSQKQLSTDASQTQDASIANEN 461
>SPAC222.07c |hri2||eIF2 alpha kinase Hri2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 639
Score = 27.5 bits (58), Expect = 2.7
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Frame = +3
Query: 555 LISDSCTSPITSKDKDNSCETYMEAK--EFSPDLISPKNL--CNGFLDSTFNDTLQDNEE 722
L D + P+ S + N + Y+ K +F + + KN FL+ LQD +
Sbjct: 429 LPEDRGSVPLISYNDKNDLKEYITPKIGDFGLVVENKKNTETALSFLERNHLPNLQDETQ 488
Query: 723 PLGSST-ASKETLEANKSNEN 782
+G++T A+ E L+A S N
Sbjct: 489 HIGTATYAAPELLDAMSSQHN 509
>SPCC1919.14c |bdp1||transcription factor TFIIIB complex subunit
Bdp1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 507
Score = 27.1 bits (57), Expect = 3.6
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Frame = +3
Query: 381 ESTNGDEKLIHNNPILS----AVIKNHLQSYDPRSPTQDFERTPIIISSKINDLTNDTEN 548
+S +EKL+H+NP V++ L + + SP D + K DL D EN
Sbjct: 76 DSVKQNEKLLHSNPTFKISKPTVLEQPLNAIEHLSPETDLSSSAEQQFMKELDLFFD-EN 134
Query: 549 LRL-----ISD-SCTSPITSKDKDNSCETYMEAK 632
+ L +SD SP T K + + E+ ++ K
Sbjct: 135 IPLSQLSAVSDGKADSPATKKSRRSYRESSLKRK 168
>SPBC26H8.09c |snf59||SWI/SNF complex subunit
Snf59|Schizosaccharomyces pombe|chr 2|||Manual
Length = 515
Score = 26.6 bits (56), Expect = 4.8
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 648 LISPKNLCNGFLDSTFNDTLQDNEEPLGSSTASKETLEANKSN 776
L PK+ N +ST D L +EEP +++KE+ + SN
Sbjct: 93 LEEPKHHDNSNKESTNLDDLNMSEEPKHHDSSNKESTNLDNSN 135
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 26.6 bits (56), Expect = 4.8
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +3
Query: 366 LRKTFESTNGDE---KLIHNNPILSAVIKNHLQSYDPRSPTQDFERTPIIISSKINDLTN 536
L+K + T D + I +V+KNH S R P+++ +P + +ND
Sbjct: 13 LKKLWNDTKNDYLEWERSQQGQISESVVKNHSPSKRKRRPSKEPSLSPKRRKNILNDQKK 72
Query: 537 DTENL 551
D E++
Sbjct: 73 DEESI 77
>SPAC29A4.11 |rga3||GTPase activating protein
Rga3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 969
Score = 26.2 bits (55), Expect = 6.3
Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 7/111 (6%)
Frame = +3
Query: 474 PTQDFERTPIIIS--SKINDLTNDTENLRLISDSCTSPITSKDKDNSCETYMEAKEFSPD 647
PT D TP S + +L ENL ++ + ++S DNS ++ ++
Sbjct: 439 PTNDHSSTPAQSERDSDVEELREQLENLTALTKKLSERLSSSTFDNS--KFIRTEDKDTV 496
Query: 648 LISPKNLCN---GFLDSTFNDTLQD--NEEPLGSSTASKETLEANKSNENN 785
+ +C F D T + TL+D +++ + ++ A L + E N
Sbjct: 497 RSAKLEICEKFFSFADVTDDPTLKDPKHQDLVAAANAYMAMLRESYGTEIN 547
>SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 479
Score = 26.2 bits (55), Expect = 6.3
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +3
Query: 402 KLIHNNPILS-AVIKNHLQSYDPRSPTQDFERTPIIISSKINDLTNDTENLRLISDSCTS 578
+ + NP+ S A ++ + + P++ +Q ++TP + S+K L ND + + S
Sbjct: 80 RALAKNPVPSPAESESSERRHTPQTNSQKSQKTPRLSSNKRRTLKNDAK-----QRNSQS 134
Query: 579 PITSKDKDNSCETYMEAKEFSPDLISPKNLCNGFLDSTFNDTL 707
P T N +EA +P +S +G S D+L
Sbjct: 135 PGTDTSDANLTIQSIEAPRRAPQRLSDFFTPDGRRVSNIRDSL 177
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 26.2 bits (55), Expect = 6.3
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +3
Query: 339 KHNITKNIDLRKTFESTNGDEKLIHNNPILSAVIKNHLQSYDPRSPTQDFERTPIIISSK 518
KH + DL + + + L N +L + + SY +S T+D T IISS+
Sbjct: 497 KHYEQETKDLARQVQVLLHELDLCENGIVLGVDSRKKINSYVEKSLTEDETDTDQIISSR 556
Query: 519 I 521
+
Sbjct: 557 L 557
>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1402
Score = 25.8 bits (54), Expect = 8.4
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 177 SSLLDYINNKMGSNSSKPTDTSLVLKTE-LELGNSDPRSPTPEITRTPLQG 326
SS L N S+ + P L L T L L +S PRS TP T + L+G
Sbjct: 1322 SSTLQVPFNASSSSLATPKKEPLRLDTNSLTLTSSMPRSFTPSYTPSFLEG 1372
>SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 644
Score = 25.8 bits (54), Expect = 8.4
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +3
Query: 594 DKDNSCETYMEAKEFSPDLISPKNLCNGF 680
+ DN C + SP LI P N N F
Sbjct: 112 NNDNCCREIARRRSLSPLLILPLNFINAF 140
>SPBC29A10.05 |exo1|mut2|exonuclease I Exo1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 571
Score = 25.8 bits (54), Expect = 8.4
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +1
Query: 715 MKNHWAHQLPP-KKPWKPTSLMRITNQAVR 801
+ N + +PP K+P K TSL+ +TN V+
Sbjct: 362 ISNFFMKSIPPSKRPTKSTSLIDVTNVKVQ 391
>SPAC23D3.10c |eng2||endo-1,3-beta-glucanase
Eng2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 706
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 372 KTFESTNGDEKLIHNNPILSAVIKNHLQSYDPRSPTQDFERTPII 506
K + D LI+ ++ AV+KN L +Y +PT + + I+
Sbjct: 546 KLWGMVRNDTVLINRANLMLAVLKNSLNTYIYMTPTTSVQPSQIL 590
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 25.8 bits (54), Expect = 8.4
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 540 TENLRLISDSCTSPITSKDKDNSCETYMEAKEFSPDLISPKNL 668
T L +S + + I+ +D DNS + E+ SP + PK L
Sbjct: 634 TRRLSDLSVNSSGQISKQDFDNSNSIFSESSLSSPIIEEPKTL 676
>SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual
Length = 935
Score = 25.8 bits (54), Expect = 8.4
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -1
Query: 454 CKWFFITADRMGLLCINFSSPFVDSNVFLRSIFFVML 344
CK +F+ DR+ +L + FS ++ ++F+V+L
Sbjct: 717 CKHYFL--DRLAILFLTFSPTMCMLSISFEALFYVVL 751
>SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 669
Score = 25.8 bits (54), Expect = 8.4
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Frame = +3
Query: 315 PLQGKNGAKHNITKNI---DLRKTFESTNGDEK-LIHNNPILSAVIKNHLQSYDPR-SPT 479
P +G+ +++ I KN D+ K++ D + + + I NHL R +PT
Sbjct: 456 PRRGRGSSRYEINKNFINSDVPKSYTYDGYDRYGCLAVDSFYN--IYNHLDPVAMRLNPT 513
Query: 480 QDFERTPIIISSKINDLTNDTENLRLISDSCTSPITSKDKDNSCE 614
D + I ++I + LR+IS S T P+ + + S +
Sbjct: 514 VDLSFSKGIHPTRILFTRKSSSILRMISHSNTDPVELRSYNQSLQ 558
>SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 753
Score = 25.8 bits (54), Expect = 8.4
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 204 KMGSNSSKPTDTSLVLKTELEL 269
K SN S+PT TS LKT+ L
Sbjct: 532 KATSNKSRPTTTSTELKTDARL 553
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,361,724
Number of Sequences: 5004
Number of extensions: 70599
Number of successful extensions: 239
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 239
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 454497130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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